Clone BS15831 Report

Search the DGRC for BS15831

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:158
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptisoQC-RB
Protein status:BS15831.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15831.3prime Sequence

921 bp (811 high quality bases) assembled on 2007-04-16

> BS15831.3prime
ATGGTCTAGAAAGCTTCTACTTGGCCTCGGTTCCGGCCAGCAGATACTCC
AAAGCGAAGAGCCGTATAATCAGTGCCAGGTTGTCCGTCGTCGCATAATC
GATCACGCTGGCGTTATCGTCGGGCGTATGCCATACACTGGGAAAGGGCA
CCGGAATGAGGTGCAAGATCGGCACATTTCGCCGCAGGAAGGGTATGTGA
TCGTCCTCGATGAAAGAGGATCGCATGGCCTGCGACTGGAAGTAGCGGGT
GGGGTCGCGCTGGGCAACTCCACTACTGGCATAGCGCTCCAGGAGCTGCA
ACTTGGCAAGACGTGTCTCCACGGACTGGATACGCATGTACCAGGACTCG
GTGTTTTCGAAGAAGCTGTAGAATGCCGGATCGGGGGCTCCCAACAGATC
CAGGAGCACCAGCATATCTATTCTATCAAGTTTTCCTTCATGGTGCCACT
TTTTGGCCAGGTGTCGTGCTCCATAGATGGAGTCCTTGGGTCCCCACTCC
TCAAAAGCCTCCTCGCCATCGAAGAACAAGAGCATCAAACTCAGTTTGCT
CTTCTTGAGGGGTTTCAACTGCTCCTGAAGCACCTGGGCCAGGTTGAGGA
GCATGGCACAGGGCACTGCCGAGTCGGTGGCCCCCAGGAATTCCACTCCA
GGCATGTATTTGCTATCATAATGGCAGGACAGCACCAGATATCTCTCAGC
ATTTGGATTCAGGGTGGCGATGATGTTGTGGAAATGCAATTTGCCTTTGA
TGGGAGCGTGATCATGAAAGCTGTTTACTTCCACATCCCAGTCTAGATCC
CTCAAACTCTGGACGATGTATTCTCGAACGATGCTATGATTTGTTGTGCC
CACAACTCGAGGTATAAAGATTTTGTCAAGGGCTTCCCTTAAGTGTAGCT
TATCGGATAGATTGCTGTACT

BS15831.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG5976-PB 1065 CG5976-RB 161..1065 921..17 4400 99.4 Minus
CG5976-PA 1059 CG5976-RA 155..1059 921..17 4400 99.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
isoQC-RA 1975 CG5976-RA 580..1484 921..17 4450 99.4 Minus
isoQC-RB 1617 CG5976-RB 222..1126 921..17 4450 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20475608..20476512 921..17 4450 99.4 Minus
Blast to na_te.dros performed on 2015-02-12 17:10:51 has no hits.

BS15831.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:24 Download gff for BS15831.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5976-PA 155..1059 17..921 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:11:11 Download gff for BS15831.3prime
Subject Subject Range Query Range Percent Splice Strand
isoQC-RB 222..1126 17..921 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:06:43 Download gff for BS15831.3prime
Subject Subject Range Query Range Percent Splice Strand
isoQC-RB 222..1126 17..921 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:06:43 Download gff for BS15831.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 20475608..20476512 17..921 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:11:11 Download gff for BS15831.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20468708..20469612 17..921 99   Minus

BS15831.5prime Sequence

864 bp (738 high quality bases) assembled on 2007-05-07

> BS15831.5prime
GAAGTTATCAGTCGACATGCGTCTGCTACTCAGAAATTATTCCCTAATGG
AGGCCGTCAAAAGATTGCTGCCGAGACCGCGCAAAAAAATCTACAATCTA
GGCGCTTGCTTCGAACTGGTGGATATTCCTAAGATATCCTACAATCCCAG
CGAGCTCTCCGAGCCCCGATTCCTGGAGTACAGCAATCTATCCGATAAGC
TACACCTAAGGGAAGCCATTGACAAAATCCTTATACCTCGAGTTGTGGGC
ACAACAAATCATAGCATCGTTCGAGAATACATCGTCCAGAGTTTGAGGGA
TCTAGACTGGGATGTGGAAGTAAACAGCTTTCATGATCACGCTCCCATCA
AAGGCAAATTGCATTTCCACAACATCATCGCCACCCTGAATCCAAATGCT
GAGAGATATCTGGTGCTGTCCTGCCATTATGATAGCAAATACATGCCTGG
AGTGGAATTCCTGGGGGCCACCGACTCGGCAGTGCCCTGTGCCATGCTCC
TCAACCTGGCCCAGGTGCTTCAGGAGCAGTTGAAACCCCTCAAGAAGAGC
AAACTGAGTTTGATGCTCTTGTTCTTCGATGGCGAGGAGGCTTTTGAGGA
GTGGGGACCCAAGGACTCCATCTATGGAGCACGACACCTGGCCAAAAAGT
GGCACCATGAAGGAAAACTTGATAGAATAGATATGCTGGTGCTCCTGGAT
CTGTTGGGAGCCCCCGATCCGGCATTCTACAGCTTCTTCGAAAACACCGA
GTCCTGGTACATGCGTATCCAGTCCGTGGAGACACGTCTTGGCAAGTTGC
AGCTCCTGAAGCGCTATGCCAGTAGTGGAGTTGCCCAGCGCGACCCCACC
CGCTACTTCCAGTC

BS15831.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG5976-PB 1065 CG5976-RB 1..848 17..864 4140 99.5 Plus
CG5976-PA 1059 CG5976-RA 110..842 132..864 3565 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
isoQC-RB 1617 CG5976-RB 62..909 17..864 4180 99.5 Plus
isoQC-RA 1975 CG5976-RA 535..1267 132..864 3605 99.5 Plus
CG5969-RA 947 CG5969-RA 683..799 17..133 585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20475563..20476295 132..864 3605 99.5 Plus
3L 28110227 3L 20474527..20474643 17..133 585 100 Plus
Blast to na_te.dros performed 2015-02-10 23:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1868..1905 124..87 109 76.3 Minus

BS15831.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:24 Download gff for BS15831.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5976-PB 1..848 17..864 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:58:10 Download gff for BS15831.5prime
Subject Subject Range Query Range Percent Splice Strand
isoQC-RB 53..909 7..864 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:48:45 Download gff for BS15831.5prime
Subject Subject Range Query Range Percent Splice Strand
isoQC-RB 53..909 7..864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:48:45 Download gff for BS15831.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20474518..20474643 7..133 97 -> Plus
3L 20475565..20476295 134..864 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:58:10 Download gff for BS15831.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20467618..20467743 7..133 97 -> Plus
arm_3L 20468665..20469395 134..864 99   Plus

BS15831.complete Sequence

1097 bp assembled on 2007-05-07

GenBank Submission: FJ637972

> BS15831.complete
GAAGTTATCAGTCGACATGCGTCTGCTACTCAGAAATTATTCCCTAATGG
AGGCCGTCAAAAGATTGCTGCCGAGACCGCGCAAAAAAATCTACAATCTA
GGCGCTTGCTTCGAACTGGTGGATATTCCTAAGATATCCTACAATCCCAG
CGAGCTCTCCGAGCCCCGATTCCTGGAGTACAGCAATCTATCCGATAAGC
TACACCTAAGGGAAGCCATTGACAAAATCCTTATACCTCGAGTTGTGGGC
ACAACAAATCATAGCATCGTTCGAGAATACATCGTCCAGAGTTTGAGGGA
TCTAGACTGGGATGTGGAAGTAAACAGCTTTCATGATCACGCTCCCATCA
AAGGCAAATTGCATTTCCACAACATCATCGCCACCCTGAATCCAAATGCT
GAGAGATATCTGGTGCTGTCCTGCCATTATGATAGCAAATACATGCCTGG
AGTGGAATTCCTGGGGGCCACCGACTCGGCAGTGCCCTGTGCCATGCTCC
TCAACCTGGCCCAGGTGCTTCAGGAGCAGTTGAAACCCCTCAAGAAGAGC
AAACTGAGTTTGATGCTCTTGTTCTTCGATGGCGAGGAGGCTTTTGAGGA
GTGGGGACCCAAGGACTCCATCTATGGAGCACGACACCTGGCCAAAAAGT
GGCACCATGAAGGAAAACTTGATAGAATAGATATGCTGGTGCTCCTGGAT
CTGTTGGGAGCCCCCGATCCGGCATTCTACAGCTTCTTCGAAAACACCGA
GTCCTGGTACATGCGTATCCAGTCCGTGGAGACACGTCTTGCCAAGTTGC
AGCTCCTGGAGCGCTATGCCAGTAGTGGAGTTGCCCAGCGCGACCCCACC
CGCTACTTCCAGTCGCAGGCCATGCGATCCTCTTTCATCGAGGACGATCA
CATACCCTTCCTGCGGCGAAATGTGCCGATCTTGCACCTCATTCCGGTGC
CCTTTCCCAGTGTATGGCATACGCCCGACGATAACGCCAGCGTGATCGAT
TATGCGACGACGGACAACCTGGCACTGATTATACGGCTCTTCGCTTTGGA
GTATCTGCTGGCCGGAACCGAGGCCAAGTAGAAGCTTTCTAGACCAT

BS15831.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
isoQC-RB 1065 CG5976-PB 1..1065 17..1081 5295 99.8 Plus
isoQC-RA 1059 CG5976-PA 110..1059 132..1081 4720 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:31:19
Subject Length Description Subject Range Query Range Score Percent Strand
isoQC-RB 1617 CG5976-RB 62..1126 17..1081 5295 99.8 Plus
isoQC-RA 1975 CG5976-RA 535..1484 132..1081 4720 99.8 Plus
CG5969-RA 947 CG5969-RA 683..799 17..133 585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20475563..20476512 132..1081 4720 99.8 Plus
3L 28110227 3L 20474527..20474643 17..133 585 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:31:17 has no hits.

BS15831.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:00 Download gff for BS15831.complete
Subject Subject Range Query Range Percent Splice Strand
CG5976-RB 1..1065 17..1081 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:31:07 Download gff for BS15831.complete
Subject Subject Range Query Range Percent Splice Strand
CG5976-RB 53..1126 7..1081 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:10 Download gff for BS15831.complete
Subject Subject Range Query Range Percent Splice Strand
isoQC-RB 62..1126 17..1081 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:00 Download gff for BS15831.complete
Subject Subject Range Query Range Percent Splice Strand
CG5976-RB 53..1126 7..1081 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:20:21 Download gff for BS15831.complete
Subject Subject Range Query Range Percent Splice Strand
isoQC-RB 62..1126 17..1081 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:20:21 Download gff for BS15831.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20474527..20474643 17..133 100 -> Plus
3L 20475565..20476512 134..1081 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:10 Download gff for BS15831.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20467627..20467743 17..133 100 -> Plus
arm_3L 20468665..20469612 134..1081 99   Plus

BS15831.pep Sequence

Translation from 16 to 1080

> BS15831.pep
MRLLLRNYSLMEAVKRLLPRPRKKIYNLGACFELVDIPKISYNPSELSEP
RFLEYSNLSDKLHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLDWDV
EVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSKYMPGVEFLG
ATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKD
SIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMR
IQSVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLR
RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAG
TEAK*

BS15831.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:45:14
Subject Length Description Subject Range Query Range Score Percent Strand
isoQC-PB 354 CG5976-PB 1..354 1..354 1846 100 Plus
isoQC-PA 352 CG5976-PA 32..352 34..354 1651 98.8 Plus
CG6168-PC 342 CG6168-PC 39..331 40..347 686 43.5 Plus
CG6168-PB 342 CG6168-PB 39..331 40..347 686 43.5 Plus
QC-PA 340 CG32412-PA 37..326 60..347 646 43.5 Plus