Clone BS15858 Report

Search the DGRC for BS15858

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:158
Well:58
Vector:pDNR-Dual
Associated Gene/Transcriptstai-RC
Protein status:BS15858.pep: full length peptide match
Sequenced Size:806

Clone Sequence Records

BS15858.complete Sequence

806 bp assembled on 2010-02-09

GenBank Submission: KX805824

> BS15858.complete
GAAGTTATCAGTCGACATGGTGAACAACACTGTTGATACTGAAGCCACAG
AGATTCGCTGCCAGGAGAAGTCCCGCGGGGGATTGAGCTATGAGGTCATC
CTGGCCGAACCGGCACCCAATGTGGCCGTTCCAAAACGACCGGTCACCCC
TGGCAAGAACGTTAGCGTCGAGGAGATTGAGCAGAAACTTAAGGCGGCCG
AGGAACGTCGCATTTCTCTAGAAGCCAAGAAGATGGCTGACATCTCCACT
AAGCTGGCTAAAGTCGAGGAGGCGACTCGCAAAAAGGATGAGATCACCAA
TGAGTTTATTACTCAGACCAAGGAGCAGCTGGAGTCGAAAATGGAGCTGC
ATGTGGAGAAGCGAGAGGCCATCATCAGTGACATGAAGGAGAAGCTAAAG
ATCCATGCCCAGGATATCGAAAAGACGCGTGAGACTCTTGAGCAGCAGAA
GGCCAACGAGCAGAAGGCAATCGAGGAAAAGTTGAAGATTGCTCAGTCTC
TTCGCGATGAGAATATCAAGAAAATGTTGGATCGCCTAAAGGAGCATAAC
ACAATCAAAATTGCCGAAATCAAATCGCAGAACGATCAATTGGAATGTCA
AAAGATCGAGGAGAAAGCGCGCATTTATGAGAACAAATTGTTCGCCGCCG
AGCAGAAACGCGAAAAGGAATTGCAAAAAAAAATTGAAAAAGTTCAAAAA
CTCGAACGTCGCGCTGAGCTCGTGCGCCAGAACAAGGCCCAGGCCCAGGA
TTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCAGGCTAAAAGCTTTCTA
GACCAT

BS15858.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:57:32
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 774 CG31641-PC 1..774 17..790 3870 100 Plus
stai-RD 1146 CG31641-PD 400..1146 44..790 3735 100 Plus
stai-RE 909 CG31641-PE 164..909 45..790 3730 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 1859 CG31641-RC 251..1024 17..790 3870 100 Plus
stai-RD 2872 CG31641-RD 537..1283 44..790 3735 100 Plus
stai-RE 2395 CG31641-RE 815..1560 45..790 3730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6122005..6122190 215..400 930 100 Plus
2L 23513712 2L 6121772..6121943 43..214 860 100 Plus
2L 23513712 2L 6122698..6122859 548..709 795 99.4 Plus
2L 23513712 2L 6122260..6122410 397..547 755 100 Plus
2L 23513712 2L 6122978..6123064 704..790 435 100 Plus
Blast to na_te.dros performed 2014-11-27 12:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 7724..7808 368..452 110 58.8 Plus

BS15858.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:48 Download gff for BS15858.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 250..1021 17..788 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:46 Download gff for BS15858.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1022 17..788 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:57:52 Download gff for BS15858.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 250..1021 17..788 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:04 Download gff for BS15858.complete
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1022 17..788 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:04 Download gff for BS15858.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6121774..6121943 45..214 100 -> Plus
2L 6122005..6122190 215..400 100 -> Plus
2L 6122264..6122410 401..547 100 -> Plus
2L 6122698..6122853 548..703 100 -> Plus
2L 6101771..6101798 17..44 100 -> Plus
2L 6122978..6123062 704..788 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:46 Download gff for BS15858.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6101771..6101798 17..44 100 -> Plus
arm_2L 6121774..6121943 45..214 100 -> Plus
arm_2L 6122005..6122190 215..400 100 -> Plus
arm_2L 6122264..6122410 401..547 100 -> Plus
arm_2L 6122698..6122853 548..703 100 -> Plus
arm_2L 6122978..6123062 704..788 100   Plus

BS15858.3prime Sequence

804 bp (804 high quality bases) assembled on 2007-04-16

> BS15858.3prime
ATGGTCTAGAAAGCTTTTAGCCTGAGGAGGCAATGGCGCTCTGCTGACCA
TCCAAATCCTGGGCCTGGGCCTTGTTCTGGCGCACGAGCTCAGCGCGACG
TTCGAGTTTTTGAACTTTTTCAATTTTTTTTTGCAATTCCTTTTCGCGTT
TCTGCTCGGCGGCGAACAATTTGTTCTCATAAATGCGCGCTTTCTCCTCG
ATCTTTTGACATTCCAATTGATCGTTCTGCGATTTGATTTCGGCAATTTT
GATTGTGTTATGCTCCTTTAGGCGATCCAACATTTTCTTGATATTCTCAT
CGCGAAGAGACTGAGCAATCTTCAACTTTTCCTCGATTGCCTTCTGCTCG
TTGGCCTTCTGCTGCTCAAGAGTCTCACGCGTCTTTTCGATATCCTGGGC
ATGGATCTTTAGCTTCTCCTTCATGTCACTGATGATGGCCTCTCGCTTCT
CCACATGCAGCTCCATTTTCGACTCCAGCTGCTCCTTGGTCTGAGTAATA
AACTCATTGGTGATCTCATCCTTTTTGCGAGTCGCCTCCTCGACTTTAGC
CAGCTTAGTGGAGATGTCAGCCATCTTCTTGGCTTCTAGAGAAATGCGAC
GTTCCTCGGCCGCCTTAAGTTTCTGCTCAATCTCCTCGACGCTAACGTTC
TTGCCAGGGGTGACCGGTCGTTTTGGAACGGCCACATTGGGTGCCGGTTC
GGCCAGGATGACCTCATAGCTCAATCCCCCGCGGGACTTCTCCTGGCAGC
GAATCTCTGTGGCTTCAGTATCAACAGTGTTGTTCACCATGTCGACTGAT
AACT

BS15858.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31641-PC 774 stai-RC 1..774 790..17 3870 100 Minus
CG31641-PB 909 stai-RB 164..909 762..17 3730 100 Minus
CG31641-PA 753 stai-RA 164..666 762..260 2515 100 Minus
CG31641-PA 753 stai-RA 667..753 103..17 435 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 1859 CG31641-RC 251..1024 790..17 3870 100 Minus
stai-RD 2872 CG31641-RD 537..1283 763..17 3735 100 Minus
stai-RE 2395 CG31641-RE 815..1560 762..17 3730 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6122005..6122190 592..407 930 100 Minus
2L 23513712 2L 6121772..6121943 764..593 860 100 Minus
2L 23513712 2L 6122698..6122859 259..98 795 99.4 Minus
2L 23513712 2L 6122260..6122410 410..260 755 100 Minus
2L 23513712 2L 6122978..6123064 103..17 435 100 Minus
Blast to na_te.dros performed 2015-02-13 07:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 7724..7808 439..355 110 58.8 Minus

BS15858.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:42 Download gff for BS15858.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31641-PC 1..774 17..790 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:48:22 Download gff for BS15858.3prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1024 17..790 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:46:26 Download gff for BS15858.3prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1024 17..790 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:46:26 Download gff for BS15858.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6101771..6101798 763..790 100 -> Minus
2L 6121774..6121943 593..762 100 -> Minus
2L 6122005..6122190 407..592 100 -> Minus
2L 6122264..6122410 260..406 100 -> Minus
2L 6122698..6122853 104..259 100 -> Minus
2L 6122978..6123064 17..103 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:48:22 Download gff for BS15858.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6101771..6101798 763..790 100 -> Minus
arm_2L 6121774..6121943 593..762 100 -> Minus
arm_2L 6122005..6122190 407..592 100 -> Minus
arm_2L 6122264..6122410 260..406 100 -> Minus
arm_2L 6122698..6122853 104..259 100 -> Minus
arm_2L 6122978..6123064 17..103 100   Minus

BS15858.5prime Sequence

804 bp (728 high quality bases) assembled on 2007-04-17

> BS15858.5prime
GAAGTTATCAGTCGACATGGTGAACAACACTGTTGATACTGAAGCCACAG
AGATTCGCTGCCAGGAGAAGTCCCGCGGGGGATTGAGCTATGAGGTCATC
CTGGCCGAACCGGCACCCAATGTGGCCGTTCCAAAACGACCGGTCACCCC
TGGCAAGAACGTTAGCGTCGAGGAGATTGAGCAGAAACTTAAGGCGGCCG
AGGAACGTCGCATTTCTCTAGAAGCCAAGAAGATGGCTGACATCTCCACT
AAGCTGGCTAAAGTCGAGGAGGCGACTCGCAAAAAGGATGAGATCACCAA
TGAGTTTATTACTCAGACCAAGGAGCAGCTGGAGTCGAAAATGGAGCTGC
ATGTGGAGAAGCGAGAGGCCATCATCAGTGACATGAAGGAGAAGCTAAAG
ATCCATGCCCAGGATATCGAAAAGACGCGTGAGACTCTTGAGCAGCAGAA
GGCCAACGAGCAGAAGGCAATCGAGGAAAAGTTGAAGATTGCTCAGTCTC
TTCGCGATGAGAATATCAAGAAAATGTTGGATCGCCTAAAGGAGCATAAC
ACAATCAAAATTGCCGAAATCAAATCGCAGAACGATCAATTGGAATGTCA
AAAGATCGAGGAGAAAGCGCGCATTTATGAGAACAAATTGTTCGCCGCCG
AGCAGAAACGCGAAAAGGAATTGCAAAAAAAAATTGAAAAAGTTCAAAAA
CTCGAACGTCGCGCTGAGCTCGTGCGCCAGAACAAGGCCCAGGCCCAGGA
TTTGGATGGTCAGCAGAGCGCCATTGCCTCCTCANGCTAAAAGCTTTCTA
GACC

BS15858.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31641-PC 774 stai-RC 1..774 17..790 3851 99.8 Plus
CG31641-PB 909 stai-RB 164..909 45..790 3711 99.8 Plus
CG31641-PA 753 stai-RA 164..666 45..547 2515 100 Plus
CG31641-PA 753 stai-RA 667..753 704..790 416 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 1859 CG31641-RC 251..1024 17..790 3859 99.9 Plus
stai-RD 2872 CG31641-RD 537..1283 44..790 3724 99.9 Plus
stai-RE 2395 CG31641-RE 815..1560 45..790 3719 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6122005..6122190 215..400 930 100 Plus
2L 23513712 2L 6121772..6121943 43..214 860 100 Plus
2L 23513712 2L 6122698..6122859 548..709 795 99.4 Plus
2L 23513712 2L 6122260..6122410 397..547 755 100 Plus
2L 23513712 2L 6122978..6123064 704..790 424 98.9 Plus
Blast to na_te.dros performed 2015-02-10 23:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 7724..7808 368..452 110 58.8 Plus

BS15858.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:42 Download gff for BS15858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31641-PC 1..774 17..790 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:58:18 Download gff for BS15858.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1024 17..790 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:50:10 Download gff for BS15858.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1024 17..790 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:50:10 Download gff for BS15858.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6122698..6122853 548..703 100 -> Plus
2L 6122978..6123064 704..790 98   Plus
2L 6101771..6101798 17..44 100 -> Plus
2L 6121774..6121943 45..214 100 -> Plus
2L 6122005..6122190 215..400 100 -> Plus
2L 6122264..6122410 401..547 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:58:18 Download gff for BS15858.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6122978..6123064 704..790 98   Plus
arm_2L 6101771..6101798 17..44 100 -> Plus
arm_2L 6121774..6121943 45..214 100 -> Plus
arm_2L 6122005..6122190 215..400 100 -> Plus
arm_2L 6122264..6122410 401..547 100 -> Plus
arm_2L 6122698..6122853 548..703 100 -> Plus

BS15858.pep Sequence

Translation from 16 to 789

> BS15858.pep
MVNNTVDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVS
VEEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQ
TKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKANEQK
AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEK
ARIYENKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKAQAQDLDGQQ
SAIASSG*

BS15858.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
stai-PC 257 CG31641-PC 1..257 1..257 1256 100 Plus
stai-PD 381 CG31641-PD 134..381 10..257 1210 100 Plus
stai-PE 302 CG31641-PE 56..302 11..257 1206 100 Plus
stai-PB 302 CG31641-PB 56..302 11..257 1206 100 Plus
stai-PA 250 CG31641-PA 56..250 11..257 850 76.5 Plus