Clone BS15866 Report

Search the DGRC for BS15866

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:158
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptZip99C-RC
Protein status:BS15866.pep: full length peptide match
Sequenced Size:1100

Clone Sequence Records

BS15866.complete Sequence

1100 bp assembled on 2010-02-09

GenBank Submission: KX805158

> BS15866.complete
GAAGTTATCAGTCGACATGACCACGAACAGCAGCTTCTTCGATGAACACA
TCGCCATGATATACTCCAACCTGATGGACCAGTACATGCCCGAGTACTTC
AAAAGCTTTGAGTACACGCCATGGGTTTTCTCCCTGCTGGGATCGGTGGT
AATTGGACTGAGTGGCATATTCCCGCTGATCATCATTCCCACGGAGGAGA
AAATGGCTAAGGAGGGATACAAAGATCCTGCAGATTCAAAACTCCTGCGA
GTGCTTCTGAGTTTCGCGGTCGGCGGTCTGCTGGGCGATGTGTTCCTTCA
CCTGTTGCCAGAAGCCTGGGAGGGCGATAATCAAGATCCTTCTAGTCACC
CATCCCTGCGCTCGGGCCTTTGGGTACTTTCCGGCATACTGATCTTCACG
ATCGTGGAGAAAATCTTTTCCGGATATGCCAGCGCGGACGAGGAGAACCC
TCAGCCCAAGTGCGTGGAGATAGCCAACTGCCTGTTGCGTCGACATGGCG
GCCAACTACCAGAGGGCGAAACCTCTGAGAGTTGTGGCGGCGCCTGCGAC
ATCGAAGATGTAGGTAAAGTCTGTTTCCTACGCGAGCAGGAACAGAAGTC
AAAGGAAAGGAAGGAACAGCCGAAGAAGGTGGCTGGTTATCTGAACCTCT
TGGCCAACTCAATTGACAATTTCACACACGGTCTAGCCGTGGCTGGATCC
TTTTTGGTGTCCTTCAGACACGGCATTCTAGCCACTTTTGCCATATTGCT
TCATGAAATTCCGCACGAGGTGGGGGATTTCGCAATCCTGCTTCGATCCG
GATTCAGTCGCTGGGACGCCGCGCGTGCGCAACTACTCACGGCGGGAGCT
GGCCTGCTCGGTGCTCTGGTGGCCATCGGAGGCTCCGGCGTAACGTCGGC
CATGGAGGCACGTACTTCGTGGATTATGCCGTTCACCGCCGGCGGCTTTC
TGCACATTGCTCTGGTCACAGTATTACCTGATCTCTTGAAGGAGGAGGAG
CGCAAGGAGTCCATTAAGCAGCTGCTAGCACTGGTATTTGGCATTGCGTT
AATGGCCGTGATGACCATGCTATTCGAACACTAGAAGCTTTCTAGACCAT

BS15866.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:49:40
Subject Length Description Subject Range Query Range Score Percent Strand
Zip99C-RJ 1068 CG7816-PJ 1..1068 17..1084 5340 100 Plus
Zip99C-RI 1068 CG7816-PI 1..1068 17..1084 5340 100 Plus
Zip99C-RH 1068 CG7816-PH 1..1068 17..1084 5340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:49:41
Subject Length Description Subject Range Query Range Score Percent Strand
Zip99C-RJ 1638 CG7816-RJ 314..1388 17..1091 5345 99.8 Plus
Zip99C-RI 1709 CG7816-RI 385..1459 17..1091 5345 99.8 Plus
Zip99C-RH 1476 CG7816-RH 152..1226 17..1091 5345 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:49:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29864413..29864829 749..333 2085 100 Minus
3R 32079331 3R 29865057..29865267 227..17 1055 100 Minus
3R 32079331 3R 29863951..29864137 1091..905 905 98.9 Minus
3R 32079331 3R 29864195..29864350 905..750 780 100 Minus
3R 32079331 3R 29864889..29864996 335..228 540 100 Minus
Blast to na_te.dros performed on 2014-11-27 12:49:39 has no hits.

BS15866.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:42 Download gff for BS15866.complete
Subject Subject Range Query Range Percent Splice Strand
CG7816-RD 168..1235 17..1084 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:24:49 Download gff for BS15866.complete
Subject Subject Range Query Range Percent Splice Strand
CG7816-RH 152..1219 17..1084 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:58:39 Download gff for BS15866.complete
Subject Subject Range Query Range Percent Splice Strand
CG7816-RD 168..1235 17..1084 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:33 Download gff for BS15866.complete
Subject Subject Range Query Range Percent Splice Strand
Zip99C-RH 152..1219 17..1084 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:33 Download gff for BS15866.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29863958..29864136 906..1084 100 <- Minus
3R 29864195..29864350 750..905 100 <- Minus
3R 29864413..29864826 336..749 100 <- Minus
3R 29864889..29864996 228..335 100 <- Minus
3R 29865057..29865267 17..227 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:24:49 Download gff for BS15866.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25689680..25689858 906..1084 100 <- Minus
arm_3R 25689917..25690072 750..905 100 <- Minus
arm_3R 25690135..25690548 336..749 100 <- Minus
arm_3R 25690611..25690718 228..335 100 <- Minus
arm_3R 25690779..25690989 17..227 100   Minus

BS15866.3prime Sequence

909 bp (717 high quality bases) assembled on 2007-04-16

> BS15866.3prime
ATGGTCTAGAAAGCTTCTAGTGTTCGAATAGCATGGTCATCACGGCCATT
AACGCAATGCCAAATACCAGTGCTAGCAGCTGCTTAATGGACTCCTTGCG
CTCCTCCTCCTTCAAGAGATCAGGTAATACTGTGACCAGAGCAATGTGCA
GAAAGCCGCCGGCGGTGAACGGCATAATCCACGAAGTACGTGCCTCCATG
GCCGACGTTACGCCGGAGCCTCCGATGGCCACCAGAGCACCGAGCAGGCC
AGCTCCCGCCGTGAGTAGTTGCGCACGCGCGGCGTCCCAGCGACTGAATC
CGGATCGAAGCAGGATTGCGAAATCCCCCACCTCGTGCGGAATTTCATGA
AGCAATATGGCAAAAGTGGCTAGAATGCCGTGTCTGAAGGACACCAAAAA
GGATCCAGCCACGGCTAGACCGTGTGTGAAATTGTCAATTGAGTTGGCCA
AGAGGTTCAGATAACCAGCCACCTTCTTCGGCTGTTCCTTCCTTTCCTTT
GACTTCTGTTCCTGCTCGCGTAGGAAACAGACTTTACCTACATCTTCGAT
GTCGCAGGCGCCGCCACAACTCTCAGAGGTTTCGCCCTCTGGTAGTTGGC
CGCCATGTCGACGCAACAGGCAGTTGGCTATCTCCACGCACTTGGGCTGA
GGGTTCTCCTCGTCCGCGCTGGCATATCCGGAAAAGATTTTCTCCACGAT
CGTGAAGATCAGTATGCCGGAAAGTACCCAAAGGCCCGAGCGCANGGATG
GGTGACTAGAAGGATCTTGATTATCGCCCTCCCAGGCTTCTGGCAACAGG
TGAAGGAACACATCGCCCAGCAGACCGCCGACCGCGAAACTCAGAAGCAC
TCGCAGGAGTTTTGAATCTGCAGGATCTTTGTATCCCTCCTTACCATTTT
CTCCTCCGT

BS15866.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:52:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG7816-PG 1068 CG7816-RG 175..1068 909..17 4411 99.7 Minus
CG7816-PF 1068 CG7816-RF 175..1068 909..17 4411 99.7 Minus
CG7816-PD 1068 CG7816-RD 175..1068 909..17 4411 99.7 Minus
CG7816-PA 1068 CG7816-RA 175..1068 909..17 4411 99.7 Minus
CG7816-PE 1068 CG7816-RE 175..1068 909..17 4411 99.7 Minus
CG7816-PC 1068 CG7816-RC 175..1068 909..17 4411 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:37:14
Subject Length Description Subject Range Query Range Score Percent Strand
Zip99C-RJ 1638 CG7816-RJ 488..1388 909..10 4439 99.6 Minus
Zip99C-RI 1709 CG7816-RI 559..1459 909..10 4439 99.6 Minus
Zip99C-RH 1476 CG7816-RH 326..1226 909..10 4439 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:37:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29864413..29864829 352..768 2074 99.8 Plus
3R 32079331 3R 29863951..29864137 10..196 905 98.9 Plus
3R 32079331 3R 29864195..29864350 196..351 780 100 Plus
3R 32079331 3R 29864889..29864996 766..873 540 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:37:10 has no hits.

BS15866.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:47 Download gff for BS15866.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7816-PC 175..1068 17..909 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:12:58 Download gff for BS15866.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7816-RH 326..1228 6..909 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:22:34 Download gff for BS15866.3prime
Subject Subject Range Query Range Percent Splice Strand
Zip99C-RH 326..1228 6..909 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:22:34 Download gff for BS15866.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29863949..29864136 6..195 97 <- Plus
3R 29864195..29864350 196..351 100 <- Plus
3R 29864413..29864826 352..765 99 <- Plus
3R 29864889..29864996 766..873 100 <- Plus
3R 29865057..29865093 874..909 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:12:58 Download gff for BS15866.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25689671..25689858 6..195 97 <- Plus
arm_3R 25689917..25690072 196..351 100 <- Plus
arm_3R 25690135..25690548 352..765 99 <- Plus
arm_3R 25690611..25690718 766..873 100 <- Plus
arm_3R 25690779..25690815 874..909 97   Plus

BS15866.5prime Sequence

865 bp (823 high quality bases) assembled on 2007-04-17

> BS15866.5prime
GAAGTTATCAGTCGACATGACCACGAACAGCAGCTTCTTCGATGAACACA
TCGCCATGATATACTCCAACCTGATGGACCAGTACATGCCCGAGTACTTC
AAAAGCTTTGAGTACACGCCATGGGTTTTCTCCCTGCTGGGATCGGTGGT
AATTGGACTGAGTGGCATATTCCCGCTGATCATCATTCCCACGGAGGAGA
AAATGGCTAAGGAGGGATACAAAGATCCTGCAGATTCAAAACTCCTGCGA
GTGCTTCTGAGTTTCGCGGTCGGCGGTCTGCTGGGCGATGTGTTCCTTCA
CCTGTTGCCAGAAGCCTGGGAGGGCGATAATCAAGATCCTTCTAGTCACC
CATCCCTGCGCTCGGGCCTTTGGGTACTTTCCGGCATACTGATCTTCACG
ATCGTGGAGAAAATCTTTTCCGGATATGCCAGCGCGGACGAGGAGAACCC
TCAGCCCAAGTGCGTGGAGATAGCCAACTGCCTGTTGCGTCGACATGGCG
GCCAACTACCAGAGGGCGAAACCTCTGAGAGTTGTGGCGGCGCCTGCGAC
ATCGAAGATGTAGGTAAAGTCTGTTTCCTACGCGAGCAGGAACAGAAGTC
AAAGGAAAGGAAGGAACAGCCGAAGAAGGTGGCTGGTTATCTGAACCTCT
TGGCCAACTCAATTGACAATTTCACACACGGTCTAGCCGTGGCTGGATCC
TTTTTGGTGTCCTTCAGACACGGCATTCTAGCCACTTTTGCCATATTGCT
TCATGAAATTCCGCACGAGGTGGGGGATTTCGCAATCCTGCTTCGATCCG
GATTCAGTCGCTGGGACGCCGCGCGTGCGCAACTACTCACGGCGGGAGCT
GGCCTGCTCGGTGCT

BS15866.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7816-PG 1068 CG7816-RG 1..849 17..865 4245 100 Plus
CG7816-PF 1068 CG7816-RF 1..849 17..865 4245 100 Plus
CG7816-PD 1068 CG7816-RD 1..849 17..865 4245 100 Plus
CG7816-PA 1068 CG7816-RA 1..849 17..865 4245 100 Plus
CG7816-PE 1068 CG7816-RE 1..849 17..865 4245 100 Plus
CG7816-PC 1068 CG7816-RC 1..849 17..865 4245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:37:28
Subject Length Description Subject Range Query Range Score Percent Strand
Zip99C-RJ 1638 CG7816-RJ 314..1162 17..865 4245 100 Plus
Zip99C-RI 1709 CG7816-RI 385..1233 17..865 4245 100 Plus
Zip99C-RH 1476 CG7816-RH 152..1000 17..865 4245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29864413..29864829 749..333 2085 100 Minus
3R 32079331 3R 29865057..29865267 227..17 1055 100 Minus
3R 32079331 3R 29864235..29864350 865..750 580 100 Minus
3R 32079331 3R 29864889..29864996 335..228 540 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:37:23 has no hits.

BS15866.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:48 Download gff for BS15866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7816-PC 1..849 17..865 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:13:00 Download gff for BS15866.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7816-RH 143..1000 9..865 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:23:09 Download gff for BS15866.5prime
Subject Subject Range Query Range Percent Splice Strand
Zip99C-RH 143..1000 9..865 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:23:09 Download gff for BS15866.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29864889..29864996 228..335 100 <- Minus
3R 29865057..29865273 11..227 98 <- Minus
3R 29864235..29864350 750..865 100 <- Minus
3R 29864413..29864826 336..749 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:13:00 Download gff for BS15866.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25689957..25690072 750..865 100 <- Minus
arm_3R 25690135..25690548 336..749 100 <- Minus
arm_3R 25690611..25690718 228..335 100 <- Minus
arm_3R 25690779..25690995 11..227 98 <- Minus

BS15866.pep Sequence

Translation from 16 to 1083

> BS15866.pep
MTTNSSFFDEHIAMIYSNLMDQYMPEYFKSFEYTPWVFSLLGSVVIGLSG
IFPLIIIPTEEKMAKEGYKDPADSKLLRVLLSFAVGGLLGDVFLHLLPEA
WEGDNQDPSSHPSLRSGLWVLSGILIFTIVEKIFSGYASADEENPQPKCV
EIANCLLRRHGGQLPEGETSESCGGACDIEDVGKVCFLREQEQKSKERKE
QPKKVAGYLNLLANSIDNFTHGLAVAGSFLVSFRHGILATFAILLHEIPH
EVGDFAILLRSGFSRWDAARAQLLTAGAGLLGALVAIGGSGVTSAMEART
SWIMPFTAGGFLHIALVTVLPDLLKEEERKESIKQLLALVFGIALMAVMT
MLFEH*

BS15866.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
Zip99C-PJ 355 CG7816-PJ 1..355 1..355 1825 100 Plus
Zip99C-PI 355 CG7816-PI 1..355 1..355 1825 100 Plus
Zip99C-PH 355 CG7816-PH 1..355 1..355 1825 100 Plus
Zip99C-PC 355 CG7816-PC 1..355 1..355 1825 100 Plus
Zip99C-PE 355 CG7816-PE 1..355 1..355 1825 100 Plus