Clone Sequence Records
BS15867.5prime Sequence
408 bp (408 high quality bases) assembled on 2007-05-07
> BS15867.5prime
GAAGTTATCAGTCGACATGTCCGAAAAGAAGCGATTTGTGTGCGTTAATT
GTGGACACAGAGTAAAAGAACTGTTCAAGAAATACAGCAATACTATGAAA
ACCACGCAATGCGACAACTGTCACCAAATCACGGATAAATACATTGAGTT
CGAGGAGTTTATCATATTAATAGATGCACTGCTATTAGATTCGTGCGCCT
TCCGGCACATTATATACAATGGCGACTTTAAGGTGACGAGCTCTACTGGA
AGGTTTCGCTGGTGGTGCTGCTCCTGGAATCCTTTGCGCTGTGCCGCCAA
AAACTGCCCGACCCTCCGAATGCCTCTTTGCATGTCCACGAAAAGGGCTT
TTACACATATACCCTTCAAAACATGGGAGATTACATGTTCATGAAAGCTT
TCTAGACC
BS15867.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:53:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-PB | 378 | CG32442-RB | 1..378 | 17..394 | 1890 | 100 | Plus |
| CG32442-PA | 717 | CG32442-RA | 1..216 | 17..232 | 1080 | 100 | Plus |
| CG32442-PA | 717 | CG32442-RA | 215..370 | 239..394 | 780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:14:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-RB | 942 | CG32442-RB | 93..470 | 17..394 | 1890 | 100 | Plus |
| CG32442-RA | 934 | CG32442-RA | 93..462 | 17..394 | 1760 | 97.9 | Plus |
| CG32442-RC | 930 | CG32442-RC | 93..458 | 17..394 | 1700 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:14:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21528770..21528910 | 379..239 | 705 | 100 | Minus |
| 3L | 28110227 | 3L | 21528958..21529085 | 240..113 | 640 | 100 | Minus |
| 3L | 28110227 | 3L | 21529145..21529241 | 113..17 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:14:15 has no hits.
BS15867.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:49 Download gff for
BS15867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-PB | 1..378 | 17..394 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:57:16 Download gff for
BS15867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..472 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:29:42 Download gff for
BS15867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..472 | 17..399 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:29:42 Download gff for
BS15867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21528770..21528908 | 241..379 | 100 | <- | Minus |
| 3L | 21528958..21529085 | 113..240 | 100 | <- | Minus |
| 3L | 21529146..21529241 | 17..112 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:57:16 Download gff for
BS15867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21521870..21522008 | 241..379 | 100 | <- | Minus |
| arm_3L | 21522058..21522185 | 113..240 | 100 | <- | Minus |
| arm_3L | 21522246..21522341 | 17..112 | 100 | | Minus |
BS15867.3prime Sequence
408 bp (408 high quality bases) assembled on 2007-04-16
> BS15867.3prime
ATGGTCTAGAAAGCTTTCATGAACATGTAATCTCCCATGTTTTGAAGGGT
ATATGTGTAAAAGCCCTTTTCGTGGACATGCAAAGAGGCATTCGGAGGGT
CGGGCAGTTTTTGGCGGCACAGCGCAAAGGATTCCAGGAGCAGCACCACC
AGCGAAACCTTCCAGTAGAGCTCGTCACCTTAAAGTCGCCATTGTATATA
ATGTGCCGGAAGGCGCACGAATCTAATAGCAGTGCATCTATTAATATGAT
AAACTCCTCGAACTCAATGTATTTATCCGTGATTTGGTGACAGTTGTCGC
ATTGCGTGGTTTTCATAGTATTGCTGTATTTCTTGAACAGTTCTTTTACT
CTGTGTCCACAATTAACGCACACAAATCGCTTCTTTTCGGACATGTCGAC
TGATAACT
BS15867.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:53:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-PB | 378 | CG32442-RB | 1..378 | 394..17 | 1890 | 100 | Minus |
| CG32442-PA | 717 | CG32442-RA | 1..216 | 394..179 | 1080 | 100 | Minus |
| CG32442-PA | 717 | CG32442-RA | 215..370 | 172..17 | 780 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:46:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-RB | 942 | CG32442-RB | 93..470 | 394..17 | 1890 | 100 | Minus |
| CG32442-RA | 934 | CG32442-RA | 93..462 | 394..17 | 1760 | 97.9 | Minus |
| CG32442-RC | 930 | CG32442-RC | 93..458 | 394..17 | 1700 | 96.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21528770..21528910 | 32..172 | 705 | 100 | Plus |
| 3L | 28110227 | 3L | 21528958..21529085 | 171..298 | 640 | 100 | Plus |
| 3L | 28110227 | 3L | 21529145..21529241 | 298..394 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:46:38 has no hits.
BS15867.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:48 Download gff for
BS15867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-PB | 1..378 | 17..394 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:42:22 Download gff for
BS15867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..472 | 12..394 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:16:06 Download gff for
BS15867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..472 | 12..394 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:16:06 Download gff for
BS15867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21529146..21529241 | 299..394 | 100 | | Plus |
| 3L | 21528770..21528908 | 32..170 | 100 | <- | Plus |
| 3L | 21528958..21529085 | 171..298 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:42:22 Download gff for
BS15867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21521870..21522008 | 32..170 | 100 | <- | Plus |
| arm_3L | 21522058..21522185 | 171..298 | 100 | <- | Plus |
| arm_3L | 21522246..21522341 | 299..394 | 100 | | Plus |
BS15867.complete Sequence
410 bp assembled on 2007-05-07
GenBank Submission: FJ637976
> BS15867.complete
GAAGTTATCAGTCGACATGTCCGAAAAGAAGCGATTTGTGTGCGTTAATT
GTGGACACAGAGTAAAAGAACTGTTCAAGAAATACAGCAATACTATGAAA
ACCACGCAATGCGACAACTGTCACCAAATCACGGATAAATACATTGAGTT
CGAGGAGTTTATCATATTAATAGATGCACTGCTATTAGATTCGTGCGCCT
TCCGGCACATTATATACAATGGCGACTTTAAGGTGACGAGCTCTACTGGA
AGGTTTCGCTGGTGGTGCTGCTCCTGGAATCCTTTGCGCTGTGCCGCCAA
AAACTGCCCGACCCTCCGAATGCCTCTTTGCATGTCCACGAAAAGGGCTT
TTACACATATACCCTTCAAAACATGGGAGATTACATGTTCATGAAAGCTT
TCTAGACCAT
BS15867.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-RB | 378 | CG32442-PB | 1..378 | 17..394 | 1890 | 100 | Plus |
| CG32442-RA | 717 | CG32442-PA | 1..370 | 17..394 | 1735 | 97.9 | Plus |
| CG32442-RC | 366 | CG32442-PC | 1..366 | 17..394 | 1675 | 96.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-RB | 942 | CG32442-RB | 93..470 | 17..394 | 1890 | 100 | Plus |
| CG32442-RA | 934 | CG32442-RA | 93..462 | 17..394 | 1735 | 97.9 | Plus |
| CG32442-RC | 930 | CG32442-RC | 93..458 | 17..394 | 1675 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21528770..21528910 | 379..239 | 705 | 100 | Minus |
| 3L | 28110227 | 3L | 21528958..21529085 | 240..113 | 640 | 100 | Minus |
| 3L | 28110227 | 3L | 21529145..21529241 | 113..17 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:42:29 has no hits.
BS15867.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:07 Download gff for
BS15867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 1..378 | 17..394 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:31:14 Download gff for
BS15867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 66..445 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:57 Download gff for
BS15867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..469 | 17..393 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:07 Download gff for
BS15867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 66..445 | 17..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:17:07 Download gff for
BS15867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32442-RB | 93..469 | 17..393 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:17:07 Download gff for
BS15867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21529146..21529241 | 17..112 | 100 | | Minus |
| 3L | 21528770..21528908 | 241..379 | 100 | <- | Minus |
| 3L | 21528958..21529085 | 113..240 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:57 Download gff for
BS15867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21521870..21522008 | 241..379 | 100 | <- | Minus |
| arm_3L | 21522058..21522185 | 113..240 | 100 | <- | Minus |
| arm_3L | 21522246..21522341 | 17..112 | 100 | | Minus |
BS15867.pep Sequence
Translation from 16 to 393
> BS15867.pep
MSEKKRFVCVNCGHRVKELFKKYSNTMKTTQCDNCHQITDKYIEFEEFII
LIDALLLDSCAFRHIIYNGDFKVTSSTGRFRWWCCSWNPLRCAAKNCPTL
RMPLCMSTKRAFTHIPFKTWEITCS*
BS15867.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32442-PB | 125 | CG32442-PB | 1..125 | 1..125 | 708 | 100 | Plus |
| CG32442-PC | 121 | CG32442-PC | 1..121 | 1..125 | 674 | 96.8 | Plus |
| CG32442-PA | 238 | CG32442-PA | 1..73 | 1..73 | 393 | 98.6 | Plus |
