Clone Sequence Records
BS15902.3prime Sequence
858 bp (764 high quality bases) assembled on 2007-04-16
> BS15902.3prime
ATGGTCTAGAAAGCTTCTACTGCGATGCTGCATTTGTGCTGCCACCCGAC
TTGTTCATTTCTTGTGCATGACTTTGTACAGATTGCTGCGAAGAGAGAAC
GTTAGAAGTCCACGCTCCAGTCGCTGCTGTTGGAGTGGTAGAGTCTTGGT
TACTGCTATTGCTAGAATCAAAATTAGCATTGCTATTGCTGTTAAGTGCC
ATTCGCTGCATTTGTCGGATCACTGTAGCGGCGTAGTAGGCTTGCTTCCA
ACGAGATTTTGCAAAGTTTTTCTTTAACTGCTCTGACACGGTTCCGTGAA
TGTTTCTGCTGCTGGCCTCATTTCCAGAAATCCAAGCATGGCCAAGTGCT
TGCTTGCAAGTATACCTCTTCTCTACCGTCACGCACATAAGGTTTTTGAT
GAAATGCTTTGCGGACTCACTAATTTCATCCCAATAGGGTGAATCAAATT
CGAAATCGCCTTTTAAAATCTGTGCGAAAAGATTAGCATCATTTTCGTCA
TAAAACGGAGGGTAGCCGCATAGAAGAATGTATGATATCACTCCAATACT
CCACACATCGACAGCTTTTCCATACGGTTTTTGCGCCAGCACCTCAGGAG
CCACATATCCTGGAGTCCCACAGGCTGTAGCCATAATTCCAGAATCCTCC
ATTTTAGATAAACCAAAATCGCTAATCATAATTTTGCTATCATCATCAGG
ACTATAGTAAAGTAAGTTTTCCGGCTTAAGATCACGATGGACGACACCTT
GTTCATGCATATAATCAACCGCTTCTAGTATCTGTCTTATAAGATGAGAA
GCGTCCTTTTCTGTGTAGGACCCCTTTTCGACAATGCGATCAAAGAGTTC
TCCACCAG
BS15902.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:59:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1495-PB | 1218 | CaMKI-RB | 377..1218 | 858..17 | 4210 | 100 | Minus |
| CG1495-PH | 855 | CaMKI-RH | 14..855 | 858..17 | 4210 | 100 | Minus |
| CG1495-PD | 855 | CaMKI-RD | 14..855 | 858..17 | 4210 | 100 | Minus |
| CG1495-PG | 1218 | CaMKI-RG | 377..1218 | 858..17 | 4210 | 100 | Minus |
| CG1495-PE | 1218 | CaMKI-RE | 377..1218 | 858..17 | 4210 | 100 | Minus |
| CG1495-PA | 1218 | CaMKI-RA | 377..1218 | 858..17 | 4210 | 100 | Minus |
| CG1495-PC | 1218 | CaMKI-RC | 377..1218 | 858..17 | 4210 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKI-RI | 2604 | CG1495-RI | 1015..1856 | 858..17 | 4210 | 100 | Minus |
| CaMKI-RA | 2239 | CG1495-RA | 650..1491 | 858..17 | 4210 | 100 | Minus |
| CaMKI-RG | 3382 | CG1495-RG | 1793..2634 | 858..17 | 4210 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 451188..451455 | 726..459 | 1340 | 100 | Minus |
| 4 | 1348131 | 4 | 452970..453199 | 246..17 | 1150 | 100 | Minus |
| 4 | 1348131 | 4 | 450376..450509 | 858..725 | 670 | 100 | Minus |
| 4 | 1348131 | 4 | 452616..452745 | 461..332 | 650 | 100 | Minus |
| 4 | 1348131 | 4 | 452802..452890 | 333..245 | 445 | 100 | Minus |
| 4 | 1348131 | 4 | 125346..125411 | 788..725 | 220 | 92.4 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:28:22 has no hits.
BS15902.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:07 Download gff for
BS15902.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1495-PC | 377..1218 | 17..858 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:58:26 Download gff for
BS15902.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RG | 1793..2645 | 7..858 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:52:16 Download gff for
BS15902.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RG | 1793..2645 | 7..858 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:52:16 Download gff for
BS15902.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 450376..450509 | 725..858 | 100 | -> | Minus |
| 4 | 451190..451454 | 460..724 | 100 | -> | Minus |
| 4 | 452618..452744 | 333..459 | 100 | -> | Minus |
| 4 | 452803..452890 | 245..332 | 100 | -> | Minus |
| 4 | 452972..453210 | 7..244 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:58:26 Download gff for
BS15902.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 471002..471135 | 725..858 | 100 | -> | Minus |
| arm_4 | 471816..472080 | 460..724 | 100 | -> | Minus |
| arm_4 | 473244..473370 | 333..459 | 100 | -> | Minus |
| arm_4 | 473429..473516 | 245..332 | 100 | -> | Minus |
| arm_4 | 473598..473836 | 7..244 | 98 | | Minus |
BS15902.5prime Sequence
917 bp (785 high quality bases) assembled on 2007-04-16
> BS15902.5prime
GAAGTTATCAGTCGACATGCCTTTGTTTGGCAAAAAGGATTCGGGCAAGA
AAGCCAAGGCGAAGGACTTAAAGGAGCTCAATAAGCAAGTGTCAATTGAA
GAGAAATACAATCTTCACGGACTTCTGGGGACTGGAGCCTTTTCAGAAGT
ACGCCTAGCCGAAAGCAAAGATTCGCCAGGCGAACATTTTGCAGTGAAAA
TTATCGATAAGAAAGCTCTAAAGGGAAAGGAAGAATCTCTGGAGAATGAA
ATTCGCGTTTTGAGAAGGTTCAGTGCAAATCATTTCGATGGCAAATGTCT
AAATGGAACGCGGTTAACTCATCCAAATATAGTGCAACTCTTAGAAACGT
ATGAGGATAAGTCAAAGGTGTATCTCGTTATGGAGTTGGTTACTGGTGGA
GAACTCTTTGATCGCATTGTCGAAAAGGGGTCCTACACAGAAAAGGACGC
TTCTCATCTTATAAGACAGATACTAGAAGCGGTTGATTATATGCATGAAC
AAGGTGTCGTCCATCGTGATCTTAAGCCGGAAAACTTACTTTACTATAGT
CCTGATGATGATAGCAAAATTATGATTAGCGATTTTGGTTTATCTAAAAT
GGAGGATTCTGGAATTATGGCTACAGCCTGTGGGACTCCAGGATATGTGG
CTCCTGAGGTGCTGGCGCAAAAACCGTATGGAAAAGCTGTCGATGTGTGG
AGTATTGGAGTGATATCATACATTCTTCTATGCGGCTACCCTCCGTTTTA
TGACGAAAATGATGCTAATCTTTTCGCACAGATTTTAAAAGGCGATTTCG
AATTTGATTCACCCTATTGGGATGAAATTAGTGAGTCCGCAAAGCATTTC
ATCAAAAACTTATGTGCGTGACGGTAGAGAAGAGGTATACTTGCAAGCAA
GCACTTGGCCATGCTTG
BS15902.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1495-PB | 1218 | CaMKI-RB | 1..902 | 17..917 | 4470 | 99.8 | Plus |
| CG1495-PG | 1218 | CaMKI-RG | 1..902 | 17..917 | 4470 | 99.8 | Plus |
| CG1495-PE | 1218 | CaMKI-RE | 1..902 | 17..917 | 4470 | 99.8 | Plus |
| CG1495-PA | 1218 | CaMKI-RA | 1..902 | 17..917 | 4470 | 99.8 | Plus |
| CG1495-PC | 1218 | CaMKI-RC | 1..902 | 17..917 | 4470 | 99.8 | Plus |
| CG1495-PH | 855 | CaMKI-RH | 1..539 | 380..917 | 2655 | 99.8 | Plus |
| CG1495-PD | 855 | CaMKI-RD | 1..539 | 380..917 | 2655 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:00:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKI-RA | 2239 | CG1495-RA | 274..1175 | 17..917 | 4485 | 99.9 | Plus |
| CaMKI-RG | 3382 | CG1495-RG | 1417..2318 | 17..917 | 4485 | 99.9 | Plus |
| CaMKI-RB | 2580 | CG1495-RB | 615..1516 | 17..917 | 4485 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:59:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 451188..451455 | 525..792 | 1340 | 100 | Plus |
| 4 | 1348131 | 4 | 450371..450509 | 388..526 | 695 | 100 | Plus |
| 4 | 1348131 | 4 | 447101..447237 | 133..269 | 685 | 100 | Plus |
| 4 | 1348131 | 4 | 452616..452744 | 790..917 | 595 | 99.2 | Plus |
| 4 | 1348131 | 4 | 446920..447035 | 17..132 | 580 | 100 | Plus |
| 4 | 1348131 | 4 | 450241..450317 | 312..388 | 385 | 100 | Plus |
| 4 | 1348131 | 4 | 449922..449970 | 266..314 | 245 | 100 | Plus |
| 4 | 1348131 | 4 | 125346..125411 | 463..526 | 220 | 92.4 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:59:58 has no hits.
BS15902.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:07 Download gff for
BS15902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1495-PG | 1..902 | 17..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:19:33 Download gff for
BS15902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RB | 612..1516 | 14..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:30:59 Download gff for
BS15902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RB | 612..1516 | 14..917 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:30:59 Download gff for
BS15902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 452618..452744 | 792..917 | 99 | | Plus |
| 4 | 446917..447035 | 14..132 | 99 | -> | Plus |
| 4 | 447101..447235 | 133..267 | 100 | -> | Plus |
| 4 | 449924..449968 | 268..312 | 100 | -> | Plus |
| 4 | 450242..450316 | 313..387 | 100 | -> | Plus |
| 4 | 450371..450509 | 388..526 | 100 | -> | Plus |
| 4 | 451190..451454 | 527..791 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:19:33 Download gff for
BS15902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 467543..467661 | 14..132 | 99 | -> | Plus |
| arm_4 | 467727..467861 | 133..267 | 100 | -> | Plus |
| arm_4 | 470550..470594 | 268..312 | 100 | -> | Plus |
| arm_4 | 470868..470942 | 313..387 | 100 | -> | Plus |
| arm_4 | 470997..471135 | 388..526 | 100 | -> | Plus |
| arm_4 | 471816..472080 | 527..791 | 100 | -> | Plus |
| arm_4 | 473244..473370 | 792..917 | 99 | | Plus |
BS15902.complete Sequence
1250 bp assembled on 2007-05-07
GenBank Submission: FJ637978
> BS15902.complete
GAAGTTATCAGTCGACATGCCTTTGTTTGGCAAAAAGGATTCGGGCAAGA
AAGCCAAGGCGAAGGACTTAAAGGAGCTCAATAAGCAAGTGTCAATTGAA
GAGAAATACAATCTTCACGGACTTCTGGGGACTGGAGCCTTTTCAGAAGT
ACGCCTAGCCGAAAGCAAAGATTCGCCAGGCGAACATTTTGCAGTGAAAA
TTATCGATAAGAAAGCTCTAAAGGGAAAGGAAGAATCTCTGGAGAATGAA
ATTCGCGTTTTGAGAAGGTTCAGTGCAAATCATTTCGATGGCAAATGTCT
AAATGGAACGCGGTTAACTCATCCAAATATAGTGCAACTCTTAGAAACGT
ATGAGGATAAGTCAAAGGTGTATCTCGTTATGGAGTTGGTTACTGGTGGA
GAACTCTTTGATCGCATTGTCGAAAAGGGGTCCTACACAGAAAAGGACGC
TTCTCATCTTATAAGACAGATACTAGAAGCGGTTGATTATATGCATGAAC
AAGGTGTCGTCCATCGTGATCTTAAGCCGGAAAACTTACTTTACTATAGT
CCTGATGATGATAGCAAAATTATGATTAGCGATTTTGGTTTATCTAAAAT
GGAGGATTCTGGAATTATGGCTACAGCCTGTGGGACTCCAGGATATGTGG
CTCCTGAGGTGCTGGCGCAAAAACCGTATGGAAAAGCTGTCGATGTGTGG
AGTATTGGAGTGATATCATACATTCTTCTATGCGGCTACCCTCCGTTTTA
TGACGAAAATGATGCTAATCTTTTCGCACAGATTTTAAAAGGCGATTTCG
AATTTGATTCACCCTATTGGGATGAAATTAGTGAGTCCGCAAAGCATTTC
ATCAAAAACCTTATGTGCGTGACGGTAGAGAAGAGGTATACTTGCAAGCA
AGCACTTGGCCATGCTTGGATTTCTGGAAATGAGGCCAGCAGCAGAAACA
TTCACGGAACCGTGTCAGAGCAGTTAAAGAAAAACTTTGCAAAATCTCGT
TGGAAGCAAGCCTACTACGCCGCTACAGTGATCCGACAAATGCAGCGAAT
GGCACTTAACAGCAATAGCAATGCTAATTTTGATTCTAGCAATAGCAGTA
ACCAAGACTCTACCACTCCAACAGCAGCGACTGGAGCGTGGACTTCTAAC
GTTCTCTCTTCGCAGCAATCTGTACAAAGTCATGCACAAGAAATGAACAA
GTCGGGTGGCAGCACAAATGCAGCATCGCAGTAGAAGCTTTCTAGACCAT
BS15902.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:21:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKI-RA | 1218 | CG1495-PA | 1..1218 | 17..1234 | 6090 | 100 | Plus |
| CaMKI-RG | 1218 | CG1495-PG | 1..1218 | 17..1234 | 6090 | 100 | Plus |
| CaMKI-RB | 1218 | CG1495-PB | 1..1218 | 17..1234 | 6090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:21:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKI-RA | 2239 | CG1495-RA | 274..1491 | 17..1234 | 6090 | 100 | Plus |
| CaMKI-RG | 3382 | CG1495-RG | 1417..2634 | 17..1234 | 6090 | 100 | Plus |
| CaMKI-RB | 2580 | CG1495-RB | 615..1832 | 17..1234 | 6090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:21:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 451188..451455 | 525..792 | 1340 | 100 | Plus |
| 4 | 1348131 | 4 | 452970..453199 | 1005..1234 | 1150 | 100 | Plus |
| 4 | 1348131 | 4 | 450371..450509 | 388..526 | 695 | 100 | Plus |
| 4 | 1348131 | 4 | 447101..447237 | 133..269 | 685 | 100 | Plus |
| 4 | 1348131 | 4 | 452616..452745 | 790..919 | 650 | 100 | Plus |
| 4 | 1348131 | 4 | 446920..447035 | 17..132 | 580 | 100 | Plus |
| 4 | 1348131 | 4 | 452802..452890 | 918..1006 | 445 | 100 | Plus |
| 4 | 1348131 | 4 | 450241..450317 | 312..388 | 385 | 100 | Plus |
| 4 | 1348131 | 4 | 449922..449970 | 266..314 | 245 | 100 | Plus |
| 4 | 1348131 | 4 | 125346..125411 | 463..526 | 220 | 92.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:21:51 has no hits.
BS15902.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:51 Download gff for
BS15902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RE | 1..1218 | 17..1234 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:30:55 Download gff for
BS15902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RE | 222..1453 | 14..1244 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:40:03 Download gff for
BS15902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RB | 615..1832 | 17..1234 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:51 Download gff for
BS15902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RE | 222..1453 | 14..1244 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:56 Download gff for
BS15902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CaMKI-RB | 615..1832 | 17..1234 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:56 Download gff for
BS15902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 446920..447035 | 17..132 | 100 | -> | Plus |
| 4 | 447101..447235 | 133..267 | 100 | -> | Plus |
| 4 | 449924..449968 | 268..312 | 100 | -> | Plus |
| 4 | 450242..450316 | 313..387 | 100 | -> | Plus |
| 4 | 450371..450509 | 388..526 | 100 | -> | Plus |
| 4 | 451190..451454 | 527..791 | 100 | -> | Plus |
| 4 | 452618..452744 | 792..918 | 100 | -> | Plus |
| 4 | 452803..452890 | 919..1006 | 100 | -> | Plus |
| 4 | 452972..453199 | 1007..1234 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:40:03 Download gff for
BS15902.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 467546..467661 | 17..132 | 100 | -> | Plus |
| arm_4 | 467727..467861 | 133..267 | 100 | -> | Plus |
| arm_4 | 470550..470594 | 268..312 | 100 | -> | Plus |
| arm_4 | 470868..470942 | 313..387 | 100 | -> | Plus |
| arm_4 | 470997..471135 | 388..526 | 100 | -> | Plus |
| arm_4 | 471816..472080 | 527..791 | 100 | -> | Plus |
| arm_4 | 473244..473370 | 792..918 | 100 | -> | Plus |
| arm_4 | 473429..473516 | 919..1006 | 100 | -> | Plus |
| arm_4 | 473598..473825 | 1007..1234 | 100 | | Plus |
BS15902.pep Sequence
Translation from 16 to 1233
> BS15902.pep
MPLFGKKDSGKKAKAKDLKELNKQVSIEEKYNLHGLLGTGAFSEVRLAES
KDSPGEHFAVKIIDKKALKGKEESLENEIRVLRRFSANHFDGKCLNGTRL
THPNIVQLLETYEDKSKVYLVMELVTGGELFDRIVEKGSYTEKDASHLIR
QILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLSKMEDSGI
MATACGTPGYVAPEVLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDA
NLFAQILKGDFEFDSPYWDEISESAKHFIKNLMCVTVEKRYTCKQALGHA
WISGNEASSRNIHGTVSEQLKKNFAKSRWKQAYYAATVIRQMQRMALNSN
SNANFDSSNSSNQDSTTPTAATGAWTSNVLSSQQSVQSHAQEMNKSGGST
NAASQ*
BS15902.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CaMKI-PA | 405 | CG1495-PA | 1..405 | 1..405 | 2102 | 100 | Plus |
| CaMKI-PG | 405 | CG1495-PG | 1..405 | 1..405 | 2102 | 100 | Plus |
| CaMKI-PB | 405 | CG1495-PB | 1..405 | 1..405 | 2102 | 100 | Plus |
| CaMKI-PI | 390 | CG1495-PI | 1..390 | 1..405 | 1990 | 96.3 | Plus |
| CaMKI-PH | 284 | CG1495-PH | 1..284 | 122..405 | 1485 | 100 | Plus |
