Clone Sequence Records
BS15911.3prime Sequence
501 bp (501 high quality bases) assembled on 2007-04-16
> BS15911.3prime
ATGGTCTAGAAAGCTTTTACTTTTCCTCTGGTTTGCTGAAGACAAAGGTC
AGGTTGCACTTGCCGCAGTAGTGACGATCTTCGTGGGCAGCCATGAAGAC
GCCGGCGCCGCAGTTCTCACCAGGGCACTCGCGACGGAGACGGTGGATCT
TGCCGTTCTCGTCAACCTTGTAGTATTTCAGGACAGCTAGCTTGACCTTC
TTCCTCTTGTGCTTGATTTTCTTGGGAGTGGAGTAGTTCTTCTTCTTGCG
CTTCTTGGCACCACCACGCAGGCGGAGCACCAAGTGCAAAGTGGACTCCT
TCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA
GCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAAT
CTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGA
TGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATGTCGACTGATAAC
T
BS15911.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:01:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5271-PA | 471 | RpS27A-RA | 1..471 | 487..17 | 2355 | 100 | Minus |
| CG2960-PA | 387 | RpL40-RA | 106..228 | 382..260 | 390 | 92.6 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 787..881 | 385..291 | 275 | 91.5 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 787..881 | 385..291 | 275 | 91.5 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 787..881 | 385..291 | 275 | 91.5 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 94..197 | 394..291 | 270 | 90.3 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 94..197 | 394..291 | 270 | 90.3 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 94..197 | 394..291 | 270 | 90.3 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 310..425 | 406..291 | 255 | 88.7 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 310..425 | 406..291 | 255 | 88.7 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 310..425 | 406..291 | 255 | 88.7 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1222..1337 | 406..291 | 230 | 87.9 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1222..1337 | 406..291 | 230 | 87.9 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1222..1337 | 406..291 | 230 | 87.9 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1927..2021 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1699..1793 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1471..1565 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1015..1109 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 559..653 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1927..2021 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1699..1793 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1471..1565 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1015..1109 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 559..653 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1471..1565 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1015..1109 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1927..2021 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1699..1793 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 559..653 | 385..291 | 225 | 89.4 | Minus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 2155..2219 | 385..321 | 200 | 92.3 | Minus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 2155..2219 | 385..321 | 200 | 92.3 | Minus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 2155..2219 | 385..321 | 200 | 92.3 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 1140..1193 | 488..435 | 195 | 94.4 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 1368..1409 | 488..447 | 185 | 97.6 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 912..953 | 488..447 | 185 | 97.6 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 684..725 | 488..447 | 185 | 97.6 | Minus |
| CG11700-PA | 906 | CG11700-RA | 1..41 | 487..447 | 180 | 97.5 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 456..497 | 488..447 | 160 | 95.2 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 82..152 | 406..336 | 155 | 88.7 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 228..281 | 488..435 | 145 | 90.7 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 10..42 | 478..446 | 140 | 96.9 | Minus |
| CG32744-PA | 1605 | CG32744-RA | 313..380 | 403..336 | 140 | 88.2 | Minus |
| CG11700-PA | 906 | CG11700-RA | 684..725 | 488..447 | 135 | 92.8 | Minus |
| CG11700-PA | 906 | CG11700-RA | 456..497 | 488..447 | 135 | 92.8 | Minus |
| CG11700-PA | 906 | CG11700-RA | 228..269 | 488..447 | 135 | 92.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS27A-RA | 592 | CG5271-RA | 56..526 | 487..17 | 2355 | 100 | Minus |
| RpL40-RB | 659 | CG2960-RB | 123..350 | 487..260 | 705 | 87.8 | Minus |
| RpL40-RA | 587 | CG2960-RA | 65..292 | 487..260 | 705 | 87.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10409731..10410053 | 487..165 | 1615 | 100 | Minus |
| 2L | 23513712 | 2L | 10410239..10410390 | 168..17 | 760 | 100 | Minus |
| 2L | 23513712 | 2L | 4228025..4228252 | 487..260 | 705 | 87.3 | Minus |
| X | 23542271 | X | 6277382..6277609 | 261..488 | 585 | 83.8 | Plus |
| X | 23542271 | X | 6277610..6277837 | 261..488 | 585 | 83.8 | Plus |
| 3L | 28110227 | 3L | 3900848..3901075 | 260..487 | 585 | 83.8 | Plus |
| X | 23542271 | X | 6277149..6277381 | 256..488 | 580 | 83.3 | Plus |
| X | 23542271 | X | 6278294..6278521 | 261..488 | 570 | 83.3 | Plus |
| X | 23542271 | X | 6278522..6278748 | 261..487 | 565 | 83.3 | Plus |
| X | 23542271 | X | 6277838..6278065 | 261..488 | 555 | 82.9 | Plus |
| X | 23542271 | X | 6278066..6278293 | 261..488 | 555 | 82.9 | Plus |
| X | 23542271 | X | 6282957..6283184 | 261..488 | 540 | 82.5 | Plus |
| X | 23542271 | X | 6282729..6282956 | 261..488 | 510 | 81.6 | Plus |
| X | 23542271 | X | 6282501..6282728 | 261..488 | 480 | 80.7 | Plus |
| X | 23542271 | X | 6282306..6282500 | 294..488 | 450 | 82.1 | Plus |
| X | 23542271 | X | 6280764..6280882 | 369..487 | 220 | 79 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:06:58 has no hits.
BS15911.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:13 Download gff for
BS15911.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5271-PA | 1..471 | 17..487 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:56:44 Download gff for
BS15911.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS27A-RA | 56..529 | 10..487 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:26:28 Download gff for
BS15911.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS27A-RA | 56..529 | 10..487 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:26:28 Download gff for
BS15911.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10410241..10410393 | 10..166 | 97 | | Minus |
| 2L | 10409731..10410051 | 167..487 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:56:44 Download gff for
BS15911.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10409731..10410051 | 167..487 | 100 | -> | Minus |
| arm_2L | 10410241..10410393 | 10..166 | 97 | | Minus |
BS15911.5prime Sequence
501 bp (501 high quality bases) assembled on 2007-04-16
> BS15911.5prime
GAAGTTATCAGTCGACATGCAGATCTTCGTTAAGACCCTCACGGGCAAGA
CCATCACTCTTGAGGTCGAACCGTCGGATACTATCGAAAATGTCAAAGCC
AAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTGATCTT
CGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAACATTC
AGAAGGAGTCCACTTTGCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAG
AAGCGCAAGAAGAAGAACTACTCCACTCCCAAGAAAATCAAGCACAAGAG
GAAGAAGGTCAAGCTAGCTGTCCTGAAATACTACAAGGTTGACGAGAACG
GCAAGATCCACCGTCTCCGTCGCGAGTGCCCTGGTGAGAACTGCGGCGCC
GGCGTCTTCATGGCTGCCCACGAAGATCGTCACTACTGCGGCAAGTGCAA
CCTGACCTTTGTCTTCAGCAAACCAGAGGAAAAGTAAAAGCTTTCTAGAC
C
BS15911.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:01:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5271-PA | 471 | RpS27A-RA | 1..471 | 17..487 | 2355 | 100 | Plus |
| CG2960-PA | 387 | RpL40-RA | 106..228 | 122..244 | 390 | 92.6 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 787..881 | 119..213 | 275 | 91.5 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 787..881 | 119..213 | 275 | 91.5 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 787..881 | 119..213 | 275 | 91.5 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 94..197 | 110..213 | 270 | 90.3 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 94..197 | 110..213 | 270 | 90.3 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 94..197 | 110..213 | 270 | 90.3 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 310..425 | 98..213 | 255 | 88.7 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 310..425 | 98..213 | 255 | 88.7 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 310..425 | 98..213 | 255 | 88.7 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1222..1337 | 98..213 | 230 | 87.9 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1222..1337 | 98..213 | 230 | 87.9 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1222..1337 | 98..213 | 230 | 87.9 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1927..2021 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1699..1793 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1471..1565 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 1015..1109 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 559..653 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1699..1793 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1927..2021 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1471..1565 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 1015..1109 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 559..653 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1927..2021 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1699..1793 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1471..1565 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 1015..1109 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 559..653 | 119..213 | 225 | 89.4 | Plus |
| CG11624-PA | 2292 | Ubi-p63E-RA | 2155..2219 | 119..183 | 200 | 92.3 | Plus |
| CG11624-PC | 2292 | Ubi-p63E-RC | 2155..2219 | 119..183 | 200 | 92.3 | Plus |
| CG11624-PB | 2292 | Ubi-p63E-RB | 2155..2219 | 119..183 | 200 | 92.3 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 1140..1193 | 16..69 | 195 | 94.4 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 1368..1409 | 16..57 | 185 | 97.6 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 912..953 | 16..57 | 185 | 97.6 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 684..725 | 16..57 | 185 | 97.6 | Plus |
| CG11700-PA | 906 | CG11700-RA | 1..41 | 17..57 | 180 | 97.5 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 456..497 | 16..57 | 160 | 95.2 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 82..152 | 98..168 | 155 | 88.7 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 228..281 | 16..69 | 145 | 90.7 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 313..380 | 101..168 | 140 | 88.2 | Plus |
| CG32744-PA | 1605 | CG32744-RA | 10..42 | 26..58 | 140 | 96.9 | Plus |
| CG11700-PA | 906 | CG11700-RA | 684..725 | 16..57 | 135 | 92.8 | Plus |
| CG11700-PA | 906 | CG11700-RA | 456..497 | 16..57 | 135 | 92.8 | Plus |
| CG11700-PA | 906 | CG11700-RA | 228..269 | 16..57 | 135 | 92.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:38:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS27A-RA | 592 | CG5271-RA | 56..526 | 17..487 | 2355 | 100 | Plus |
| RpL40-RB | 659 | CG2960-RB | 123..350 | 17..244 | 705 | 87.8 | Plus |
| RpL40-RA | 587 | CG2960-RA | 65..292 | 17..244 | 705 | 87.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10409731..10410053 | 17..339 | 1615 | 100 | Plus |
| 2L | 23513712 | 2L | 10410239..10410390 | 336..487 | 760 | 100 | Plus |
| 2L | 23513712 | 2L | 4228025..4228252 | 17..244 | 705 | 87.3 | Plus |
| X | 23542271 | X | 6277382..6277609 | 243..16 | 585 | 83.8 | Minus |
| X | 23542271 | X | 6277610..6277837 | 243..16 | 585 | 83.8 | Minus |
| 3L | 28110227 | 3L | 3900848..3901075 | 244..17 | 585 | 83.8 | Minus |
| X | 23542271 | X | 6277149..6277381 | 248..16 | 580 | 83.3 | Minus |
| X | 23542271 | X | 6278294..6278521 | 243..16 | 570 | 83.3 | Minus |
| X | 23542271 | X | 6278522..6278748 | 243..17 | 565 | 83.3 | Minus |
| X | 23542271 | X | 6277838..6278065 | 243..16 | 555 | 82.9 | Minus |
| X | 23542271 | X | 6278066..6278293 | 243..16 | 555 | 82.9 | Minus |
| X | 23542271 | X | 6282957..6283184 | 243..16 | 540 | 82.5 | Minus |
| X | 23542271 | X | 6282729..6282956 | 243..16 | 510 | 81.6 | Minus |
| X | 23542271 | X | 6282501..6282728 | 243..16 | 480 | 80.7 | Minus |
| X | 23542271 | X | 6282306..6282500 | 210..16 | 450 | 82.1 | Minus |
| X | 23542271 | X | 6280764..6280882 | 135..17 | 220 | 79 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:38:04 has no hits.
BS15911.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:14 Download gff for
BS15911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5271-PA | 1..471 | 17..487 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:13:07 Download gff for
BS15911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS27A-RA | 56..529 | 17..494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:13:21 Download gff for
BS15911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS27A-RA | 56..529 | 17..494 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:13:21 Download gff for
BS15911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
| 2L | 10410241..10410393 | 338..494 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:13:07 Download gff for
BS15911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
| arm_2L | 10410241..10410393 | 338..494 | 97 | | Plus |
BS15911.complete Sequence
503 bp assembled on 2007-05-07
GenBank Submission: FJ637983
> BS15911.complete
GAAGTTATCAGTCGACATGCAGATCTTCGTTAAGACCCTCACGGGCAAGA
CCATCACTCTTGAGGTCGAACCGTCGGATACTATCGAAAATGTCAAAGCC
AAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTGATCTT
CGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAACATTC
AGAAGGAGTCCACTTTGCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAG
AAGCGCAAGAAGAAGAACTACTCCACTCCCAAGAAAATCAAGCACAAGAG
GAAGAAGGTCAAGCTAGCTGTCCTGAAATACTACAAGGTTGACGAGAACG
GCAAGATCCACCGTCTCCGTCGCGAGTGCCCTGGTGAGAACTGCGGCGCC
GGCGTCTTCATGGCTGCCCACGAAGATCGTCACTACTGCGGCAAGTGCAA
CCTGACCTTTGTCTTCAGCAAACCAGAGGAAAAGTAAAAGCTTTCTAGAC
CAT
BS15911.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:05:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS27A-RA | 471 | CG5271-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
| RpL40-RB | 387 | CG2960-PB | 1..228 | 17..244 | 705 | 87.3 | Plus |
| RpL40-RA | 387 | CG2960-PA | 1..228 | 17..244 | 705 | 87.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS27A-RA | 592 | CG5271-RA | 56..526 | 17..487 | 2355 | 100 | Plus |
| RpL40-RB | 659 | CG2960-RB | 123..350 | 17..244 | 705 | 87.3 | Plus |
| RpL40-RA | 587 | CG2960-RA | 65..292 | 17..244 | 705 | 87.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10409731..10410053 | 17..339 | 1615 | 100 | Plus |
| 2L | 23513712 | 2L | 10410239..10410390 | 336..487 | 760 | 100 | Plus |
| 2L | 23513712 | 2L | 4228025..4228252 | 17..244 | 705 | 87.3 | Plus |
| X | 23542271 | X | 6277610..6277837 | 243..16 | 585 | 83.8 | Minus |
| X | 23542271 | X | 6277382..6277609 | 243..16 | 585 | 83.8 | Minus |
| 3L | 28110227 | 3L | 3900848..3901075 | 244..17 | 585 | 83.8 | Minus |
| 3L | 28110227 | 3L | 3901304..3901531 | 244..17 | 585 | 83.8 | Minus |
| X | 23542271 | X | 6277149..6277381 | 248..16 | 580 | 83.3 | Minus |
| X | 23542271 | X | 6278294..6278521 | 243..16 | 570 | 83.3 | Minus |
| 3L | 28110227 | 3L | 3900392..3900619 | 244..17 | 570 | 83.3 | Minus |
| 3L | 28110227 | 3L | 3901532..3901759 | 244..17 | 570 | 83.3 | Minus |
| X | 23542271 | X | 6278522..6278748 | 243..17 | 565 | 83.3 | Minus |
| X | 23542271 | X | 6277838..6278065 | 243..16 | 555 | 82.9 | Minus |
| X | 23542271 | X | 6278066..6278293 | 243..16 | 555 | 82.9 | Minus |
| 3L | 28110227 | 3L | 3901076..3901303 | 244..17 | 555 | 82.9 | Minus |
| 3L | 28110227 | 3L | 3899708..3899935 | 244..17 | 555 | 82.9 | Minus |
| 3L | 28110227 | 3L | 3899936..3900163 | 244..17 | 555 | 82.9 | Minus |
| 3L | 28110227 | 3L | 3900164..3900391 | 244..17 | 555 | 82.9 | Minus |
| 3L | 28110227 | 3L | 3900620..3900847 | 244..17 | 555 | 82.9 | Minus |
| X | 23542271 | X | 6282957..6283184 | 243..16 | 540 | 82.5 | Minus |
| 3L | 28110227 | 3L | 3899484..3899707 | 240..17 | 535 | 82.6 | Minus |
| X | 23542271 | X | 6282729..6282956 | 243..16 | 510 | 81.6 | Minus |
| X | 23542271 | X | 6282501..6282728 | 243..16 | 480 | 80.7 | Minus |
| X | 23542271 | X | 6282306..6282500 | 210..16 | 450 | 82.1 | Minus |
| X | 23542271 | X | 6280764..6280882 | 135..17 | 220 | 79 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:05:40 has no hits.
BS15911.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-22 00:45:46 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-11 04:33:14 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:57 Download gff for
BS15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS27A-RA | 56..518 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-22 00:45:47 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:47 Download gff for
BS15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS27A-RA | 56..518 | 17..479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:47 Download gff for
BS15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
| 2L | 10410241..10410382 | 338..479 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:57 Download gff for
BS15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10409731..10410051 | 17..337 | 100 | -> | Plus |
| arm_2L | 10410241..10410382 | 338..479 | 100 | | Plus |
BS15911.pep Sequence
Translation from 16 to 486
> BS15911.pep
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKL
AVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLTFVF
SKPEEK*
BS15911.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS27A-PA | 156 | CG5271-PA | 1..156 | 1..156 | 819 | 100 | Plus |
| Ubi-p5E-PB | 534 | CG32744-PB | 457..533 | 1..77 | 385 | 100 | Plus |
| Ubi-p5E-PA | 534 | CG32744-PA | 457..533 | 1..77 | 385 | 100 | Plus |
| RpL40-PB | 128 | CG2960-PB | 1..76 | 1..76 | 381 | 100 | Plus |
| RpL40-PA | 128 | CG2960-PA | 1..76 | 1..76 | 381 | 100 | Plus |
| Ubi-p5E-PB | 534 | CG32744-PB | 153..228 | 1..76 | 381 | 100 | Plus |
| Ubi-p5E-PB | 534 | CG32744-PB | 229..304 | 1..76 | 381 | 100 | Plus |
| Ubi-p5E-PB | 534 | CG32744-PB | 305..380 | 1..76 | 381 | 100 | Plus |
| Ubi-p5E-PB | 534 | CG32744-PB | 381..456 | 1..76 | 381 | 100 | Plus |
| Ubi-p5E-PB | 534 | CG32744-PB | 1..76 | 1..76 | 381 | 100 | Plus |
| Ubi-p5E-PB | 534 | CG32744-PB | 77..152 | 1..76 | 381 | 100 | Plus |
