Clone BS15916 Report

Search the DGRC for BS15916

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG13284-RB
Protein status:BS15916.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15916.3prime Sequence

924 bp (850 high quality bases) assembled on 2007-04-16

> BS15916.3prime
ATGGTCTAGAAAGCTTCTAAGTAAGCTTCAGTTTCTTTTGCTTTTGCTCG
AGGGCCTCGATTCTCAGTCGTTTGAACAGTTGGTGTCCCAAGTATGTGCG
GATCGGCAGGGGAGCCAATTTCATAATGGCATACTGAATGCCATGGGTCC
AGAAACCGTTGGTCTCGCTCGTTTTTCCCAGTGTAAATACGGCGGACCGG
GCAAAAGTGTATGCGTTCGGGAAAAACAGACCTCCCTGCATTACCCGATC
GGTGTAGGCATTCATTTTGGTCACCACAAAGTTGGGCATCACCAGCTGCA
CGTGGATATTGTGCTCCGCCACCTCCAGTTCCAGGGCCTTGGAGAAGTAG
GTGACAAACTTCTTGCTCGCAGCATAGACGGTCATGTTGGGCAGTGGCTG
GAGCTCAGAGGAGGATCCCAGATTGACAATGGCGCCCTTTCGGCGACCAA
TCATCTGGGGCAGGATCTTGCGGGTGAGCATGGTAACCGATCCCATGTTG
ACGGTAAGAAGGTTCCAAAGAAGATCCTCTGAGACCAGGTCCAGACTCTC
GGGGTGCTCATACATCATGCCCACGTTGTTGACCAAAATGCCAACGTCTA
TGCCCGCCAGTTCCTTTTCGATCTGATCGTACACCTCACGTCCCTTGGCG
AAATCCGCTGCAATCCACTTGGTCTTCACTTTGTACTGGCTCTCAATCTC
ATTGGTAACCGCAATGAGCTTCTCCTTCGTCCGCGAGATGAGCACCAGGT
TGATACCCTGGCGAGCCAGCTCCCTGGCGTACTCCTTGCCAATGCCATCG
GTGGCTCCAGTCACCACTGCCCACTGTCCGAACTTATCCACCAATGTCCT
TTGGCAGTGGGGCTGGAAGTAGGGTTCAGGACGGCCTTGATTATGCTGAC
CAATGACTTCAAGTTGTCGTACAG

BS15916.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:02:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-PA 978 CG13284-RA 70..978 924..17 4405 99.4 Minus
CG13284-PB 1020 CG13284-RB 112..1020 924..17 4405 99.4 Minus
CG31809-PA 702 CG31809-RA 206..323 513..396 315 90.6 Minus
CG31810-PA 975 CG31810-RA 479..596 513..396 315 90.6 Minus
CG31809-PA 702 CG31809-RA 516..570 203..149 200 94.5 Minus
CG31810-PA 975 CG31810-RA 789..843 203..149 200 94.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-RD 2178 CG13284-RD 339..1247 924..17 4460 99.6 Minus
CG13284-RC 1676 CG13284-RC 699..1607 924..17 4460 99.6 Minus
CG13284-RE 2109 CG13284-RE 223..1131 924..17 4460 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16843513..16843962 134..583 2250 100 Plus
2L 23513712 2L 16849410..16849778 149..517 810 81.3 Plus
2L 23513712 2L 16853968..16854336 149..517 810 81.3 Plus
2L 23513712 2L 16844679..16844803 694..818 625 100 Plus
2L 23513712 2L 16843278..16843397 17..136 600 100 Plus
2L 23513712 2L 16844509..16844620 583..694 560 100 Plus
2L 23513712 2L 16846751..16846859 817..924 435 95.4 Plus
2L 23513712 2L 16850158..16850282 694..818 295 82.4 Plus
2L 23513712 2L 16854716..16854840 694..818 295 82.4 Plus
2L 23513712 2L 16849984..16850093 583..692 250 81.8 Plus
2L 23513712 2L 16854542..16854651 583..692 250 81.8 Plus
2L 23513712 2L 16849173..16849264 45..136 190 80.4 Plus
Blast to na_te.dros performed on 2015-02-13 07:51:57 has no hits.

BS15916.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:16 Download gff for BS15916.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13284-PB 112..1020 17..924 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:48:31 Download gff for BS15916.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 339..1250 11..924 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:53:36 Download gff for BS15916.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13284-RE 223..1134 11..924 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:53:36 Download gff for BS15916.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16843275..16843394 11..133 97 <- Plus
2L 16843513..16843961 134..582 100 <- Plus
2L 16844509..16844619 583..693 100 <- Plus
2L 16844679..16844801 694..816 100 <- Plus
2L 16846751..16846859 817..924 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:48:31 Download gff for BS15916.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16843275..16843394 11..133 97 <- Plus
arm_2L 16843513..16843961 134..582 100 <- Plus
arm_2L 16844509..16844619 583..693 100 <- Plus
arm_2L 16844679..16844801 694..816 100 <- Plus
arm_2L 16846751..16846859 817..924 96   Plus

BS15916.5prime Sequence

933 bp (782 high quality bases) assembled on 2007-04-16

> BS15916.5prime
GAAGTTATCAGTCGACATGCAGCCAGTTCTGGAAGTGAGCATTTACACCC
TGCTGAAGATGGCGTTCATTTGGCAGCTGATCTCGGCGGCCATCTACCTC
GTAGGACTGCTCACCATCGGTGTGTTTCTGTACGACAACCTGAAGTCATT
GGTCAGCATAATCAAGGCCGTCCTGGAACCCTACTTCCAGCCCCACTTGC
CAAGGACATTGGTGGATAAGTTCGGACAGTGGGCAGTGGTGACTGGAGCC
ACCGATGGCATTGGCAAGGAGTACGCCAGGGAGCTGGCTCGCCAGGGTAT
CAACCTGGTGCTCATCTCGCGGACGAAGGAGAAGCTCATTGCGGTTACCA
ATGAGATTGAGAGCCAGTACAAAGTGAAGACCAAGTGGATTGCAGCGGAT
TTCGCCAAGGGACGTGAGGTGTACGATCAGATCGAAAAGGAACTGGCGGG
CATAGACGTTGGCATTTTGGTCAACAACGTGGGCATGATGTATGAGCACC
CCGAGAGTCTGGACCTGGTCTCAGAGGATCTTCTTTGGAACCTTCTTACC
GTCAACATGGGATCGGTTACCATGCTCACCCGCAAGATCCTGCCCCAGAT
GATTGGTCGCCGAAAGGGCGCCATTGTCAATCTGGGATCCTCCTCTGAGC
TCCAGCCACTGCCCAACATGACCGTCTATGCTGCGAGCAAGAAGTTTGTC
ACCTACTTCTCCAAGGCCCTGGAACTGGAGGTGGCGGAGCACAATATCCA
CGTGCAGCTGGTGATGCCCAACTTTGTGGTGACCAAAATGAATGCCTACA
CCGATCGGGTAATGCAGGGAGGTCTGTTTTTTCCGAACGCATACACTTTT
GCCCGGTCCGCCGTATTTACACTGGGAAAAACGAGCGAGACCAACGGTTT
CTGGGACCCTGGGCATCAGTATGCCATTATGAA

BS15916.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-PB 1020 CG13284-RB 1..888 17..904 4415 99.8 Plus
CG13284-PA 978 CG13284-RA 1..846 59..904 4205 99.8 Plus
CG31809-PA 702 CG31809-RA 206..323 540..657 315 90.6 Plus
CG31810-PA 975 CG31810-RA 479..596 540..657 315 90.6 Plus
CG31809-PA 702 CG31809-RA 516..571 850..905 205 94.6 Plus
CG31810-PA 975 CG31810-RA 789..844 850..905 205 94.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-RD 2178 CG13284-RD 227..1144 16..933 4500 99.5 Plus
CG13284-RB 1316 CG13284-RB 227..1144 16..933 4500 99.5 Plus
CG13284-RC 1676 CG13284-RC 593..1504 22..933 4470 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16843528..16843962 904..470 2160 99.8 Minus
2L 23513712 2L 16846751..16846971 236..16 1105 100 Minus
2L 23513712 2L 16849409..16849778 905..536 800 81.1 Minus
2L 23513712 2L 16853967..16854336 905..536 800 81.1 Minus
2L 23513712 2L 16844679..16844803 359..235 625 100 Minus
2L 23513712 2L 16844509..16844620 470..359 560 100 Minus
2L 23513712 2L 16850158..16850282 359..235 295 82.4 Minus
2L 23513712 2L 16854716..16854840 359..235 295 82.4 Minus
2L 23513712 2L 16849984..16850093 470..361 250 81.8 Minus
2L 23513712 2L 16854542..16854651 470..361 250 81.8 Minus
Blast to na_te.dros performed on 2015-02-12 05:00:33 has no hits.

BS15916.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:17 Download gff for BS15916.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13284-PB 1..915 17..931 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:19:37 Download gff for BS15916.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 227..1144 16..933 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:07 Download gff for BS15916.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 227..1144 16..933 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:07 Download gff for BS15916.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16843513..16843961 471..919 98 <- Minus
2L 16844509..16844619 360..470 100 <- Minus
2L 16844679..16844801 237..359 100 <- Minus
2L 16846751..16846971 16..236 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:19:37 Download gff for BS15916.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16843513..16843961 471..919 98 <- Minus
arm_2L 16844509..16844619 360..470 100 <- Minus
arm_2L 16844679..16844801 237..359 100 <- Minus
arm_2L 16846751..16846971 16..236 100   Minus

BS15916.complete Sequence

1052 bp assembled on 2007-05-07

GenBank Submission: FJ637985

> BS15916.complete
GAAGTTATCAGTCGACATGCAGCCAGTTCTGGAAGTGAGCATTTACACCC
TGCTGAAGATGGCGTTCATTTGGCAGCTGATCTCGGCGGCCATCTACCTC
GTAGGACTGCTCACCATCGGTGTGTTTCTGTACGACAACCTGAAGTCATT
GGTCAGCATAATCAAGGCCGTCCTGGAACCCTACTTCCAGCCCCACTTGC
CAAGGACATTGGTGGATAAGTTCGGACAGTGGGCAGTGGTGACTGGAGCC
ACCGATGGCATTGGCAAGGAGTACGCCAGGGAGCTGGCTCGCCAGGGTAT
CAACCTGGTGCTCATCTCGCGGACGAAGGAGAAGCTCATTGCGGTTACCA
ATGAGATTGAGAGCCAGTACAAAGTGAAGACCAAGTGGATTGCAGCGGAT
TTCGCCAAGGGACGTGAGGTGTACGATCAGATCGAAAAGGAACTGGCGGG
CATAGACGTTGGCATTTTGGTCAACAACGTGGGCATGATGTATGAGCACC
CCGAGAGTCTGGACCTGGTCTCAGAGGATCTTCTTTGGAACCTTCTTACC
GTCAACATGGGATCGGTTACCATGCTCACCCGCAAGATCCTGCCCCAGAT
GATTGGTCGCCGAAAGGGCGCCATTGTCAATCTGGGATCCTCCTCTGAGC
TCCAGCCACTGCCCAACATGACCGTCTATGCTGCGAGCAAGAAGTTTGTC
ACCTACTTCTCCAAGGCCCTGGAACTGGAGGTGGCGGAGCACAATATCCA
CGTGCAGCTGGTGATGCCCAACTTTGTGGTGACCAAAATGAATGCCTACA
CCGATCGGGTAATGCAGGGAGGTCTGTTTTTCCCGAACGCATACACTTTT
GCCCGGTCCGCCGTATTTACACTGGGAAAAACGAGCGAGACCAACGGTTT
CTGGACCCATGGCATTCAGTATGCCATTATGAAATTGGCTCCCCTGCCGA
TCCGCACATACTTGGGACACCAACTGTTCAAACGACTGAGAATCGAGGCC
CTCGAGCAAAAGCAAAAGAAACTGAAGCTTACTTAGAAGCTTTCTAGACC
AT

BS15916.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-RD 1020 CG13284-PD 1..1020 17..1036 5100 100 Plus
CG13284-RB 1020 CG13284-PB 1..1020 17..1036 5100 100 Plus
CG13284-RC 1017 CG13284-PC 3..1017 22..1036 5075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-RD 2178 CG13284-RD 227..1247 16..1036 5105 100 Plus
CG13284-RB 1316 CG13284-RB 227..1247 16..1036 5105 100 Plus
CG13284-RC 1676 CG13284-RC 593..1607 22..1036 5075 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:36:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16843513..16843962 919..470 2250 100 Minus
2L 23513712 2L 16846751..16846971 236..16 1105 100 Minus
2L 23513712 2L 16849410..16849778 904..536 810 81.3 Minus
2L 23513712 2L 16853968..16854336 904..536 810 81.3 Minus
2L 23513712 2L 16844679..16844803 359..235 625 100 Minus
2L 23513712 2L 16843278..16843397 1036..917 600 100 Minus
2L 23513712 2L 16844509..16844620 470..359 560 100 Minus
2L 23513712 2L 16850158..16850282 359..235 295 82.4 Minus
2L 23513712 2L 16854716..16854840 359..235 295 82.4 Minus
2L 23513712 2L 16849984..16850093 470..361 250 81.8 Minus
2L 23513712 2L 16854542..16854651 470..361 250 81.8 Minus
2L 23513712 2L 16849173..16849264 1008..917 190 80.4 Minus
Blast to na_te.dros performed on 2014-11-27 16:36:54 has no hits.

BS15916.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:46 Download gff for BS15916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 1..1020 17..1036 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:30:48 Download gff for BS15916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 225..1248 16..1042 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:43 Download gff for BS15916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 228..1247 17..1036 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:46 Download gff for BS15916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 225..1248 16..1042 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:38 Download gff for BS15916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13284-RB 228..1247 17..1036 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:38 Download gff for BS15916.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16843278..16843394 920..1036 100 <- Minus
2L 16843513..16843961 471..919 100 <- Minus
2L 16844509..16844619 360..470 100 <- Minus
2L 16844679..16844801 237..359 100 <- Minus
2L 16846751..16846970 17..236 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:43 Download gff for BS15916.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16843278..16843394 920..1036 100 <- Minus
arm_2L 16843513..16843961 471..919 100 <- Minus
arm_2L 16844509..16844619 360..470 100 <- Minus
arm_2L 16844679..16844801 237..359 100 <- Minus
arm_2L 16846751..16846970 17..236 100   Minus

BS15916.pep Sequence

Translation from 16 to 1035

> BS15916.pep
MQPVLEVSIYTLLKMAFIWQLISAAIYLVGLLTIGVFLYDNLKSLVSIIK
AVLEPYFQPHLPRTLVDKFGQWAVVTGATDGIGKEYARELARQGINLVLI
SRTKEKLIAVTNEIESQYKVKTKWIAADFAKGREVYDQIEKELAGIDVGI
LVNNVGMMYEHPESLDLVSEDLLWNLLTVNMGSVTMLTRKILPQMIGRRK
GAIVNLGSSSELQPLPNMTVYAASKKFVTYFSKALELEVAEHNIHVQLVM
PNFVVTKMNAYTDRVMQGGLFFPNAYTFARSAVFTLGKTSETNGFWTHGI
QYAIMKLAPLPIRTYLGHQLFKRLRIEALEQKQKKLKLT*

BS15916.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG13284-PD 339 CG13284-PD 1..339 1..339 1716 100 Plus
CG13284-PB 339 CG13284-PB 1..339 1..339 1716 100 Plus
CG13284-PC 338 CG13284-PC 2..338 3..339 1706 100 Plus
CG13284-PE 325 CG13284-PE 1..325 15..339 1649 100 Plus
CG13284-PA 325 CG13284-PA 1..325 15..339 1649 100 Plus