Clone BS15925 Report

Search the DGRC for BS15925

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG13599-RA
Protein status:BS15925.pep: full length peptide match
Sequenced Size:920

Clone Sequence Records

BS15925.complete Sequence

920 bp assembled on 2010-02-09

GenBank Submission: KX804651

> BS15925.complete
GAAGTTATCAGTCGACATGGATCAAAATGTCAAGAATGTTGATCTTAAAC
TGGATAACATTGAGGTTCTGACCAGTGGGACAACAGCGGAGTTCGTGAAT
GGCATCCTGGACTTCTTGCTCTATCAACGCCGGCAAATCCCCTTCGTGTA
CAAAACATACAAATATTATGTGGATAAATGGTCAGATGCTGATGAATCGG
GAGAATCCAAGGATCAGGAGTCCTTTGCTCATTACCAACGCAACCAGCAG
CGCTCTAAGGCAAAGGCCACCAAGGAATCTATTAGTGACATGAGAGAGAT
CATCCGACAAGCCTTCAGGAGCTCTGAAGTGAAGAGCCTGCGATTTCTTT
TTGGCAACAATATGTTCATGCCCTCGGAGGCCTATACTCTGCACATACCA
CATGATTCCATATCCAGAGATCACTATTGCGAGCACCATGCTCTGCCCGA
AGGTCGCATCAACCAGGCGCTGCTCCGCCTGCTCACCTGCGAGGAGCTGT
ACAGGCTATTCTCCACCGAACTAAAAGTCACCAACGTGTTTCTAGAAATG
GAGCTCCTTACAGACTCCGATCGACCCCAAGGATCCCATTGTGACTCCTT
TAATCTAATCCCAAAGCATATATTAAGCCAACTTCCGCGCAGCTGCAAGA
ACATACACCTGCATCTACTGCATTGCAGTGAAAACACACCGAATGAATTA
CGCTGCTGCAAGGAGATGGATATTTACCACGATCTTGGCGTGCGGAATCT
GGATAAATCTGGGGAAGACGTTAGCCAGACCAACGAAGAGCATGACGTTT
TGAAAGCAGCAAATGAAACCAGCGGTTGGTGGCAGGCCGAGGTCATAGTT
CGCGGTTTCAGAGCTCCTGGCAACCAAAAATCGGGAGATTTGTGGTCTAG
CTAAAAGCTTTCTAGACCAT

BS15925.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 888 CG13599-PA 1..888 17..904 4440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 1029 CG13599-RA 75..962 17..904 4440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23932054..23932661 297..904 3040 100 Plus
3R 32079331 3R 23931713..23931994 17..298 1410 100 Plus
Blast to na_te.dros performed on 2014-11-27 12:58:18 has no hits.

BS15925.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:49 Download gff for BS15925.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 71..956 17..902 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:53 Download gff for BS15925.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 75..960 17..902 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:00:14 Download gff for BS15925.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 71..956 17..902 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:23 Download gff for BS15925.complete
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 75..960 17..902 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:23 Download gff for BS15925.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23931713..23931994 17..298 100 -> Plus
3R 23932056..23932659 299..902 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:53 Download gff for BS15925.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19757435..19757716 17..298 100 -> Plus
arm_3R 19757778..19758381 299..902 100   Plus

BS15925.3prime Sequence

847 bp (774 high quality bases) assembled on 2007-04-16

> BS15925.3prime
ATGGTCTAGAAAGCTTTTACCTAGACCACAAATCTCCCGATTTTTGGTTG
CCAGGAGCTCTGAAACCGCGAACTATGACCTCGGCCTGCCACCAACCGCT
GGTTTCATTTGCTGCTTTCAAAACGTCATGCTCTTCGTTGGTCTGGCTAA
CGTCTTCCCCAGATTTATCCAGATTCCGCACGCCAAGATCGTGGTAAATA
TCCATCTCCTTGCAGCAGCGTAATTCATTCGGTGTGTTTTCACTGCAATG
CAGTAGATGCAGGTGTATGTTCTTGCAGCTGCGCGGAAGTTGGCTTAATA
TATGCTTTGGGATTAGATTAAAGGAGTCACAATGGGATCCTTGGGGTCGA
TCGGAGTCTGTAAGGAGCTCCATTTCTAGAAACACGTTGGTGACTTTTAG
TTCGGTGGAGAATAGCCTGTACAGCTCCTCGCAGGTGAGCAGGCGGAGCA
GCGCCTGGTTGATGCGACCTTCGGGCAGAGCATGGTGCTCGCAATAGTGA
TCTCTGGATATGGAATCATGTGGTATGTGCAGAGTATAGGCCTCCGAGGG
CATGAACATATTGTTGCCAAAAAGAAATCGCAGGCTCTTCACTTCAGAGC
TCCTGAAGGCTTGTCGGATGATCTCTCTCATGTCACTAATAGATTCCTTG
GTGGCCTTTGCCTTAGAGCGCTGCTGGTTGCGTTGGTAATGAGCAAAGGA
CTCCTGATCCTTGGATTCTCCCGATTCATCAGCATCTGACCATTTATCCA
CATAATATTTGTATGTTTTGTACACGAAGGGGATTTGCCGGCGTTGATAG
AGCAAGAAGTCCAGGATGCCATTCACGAACTCCGCTGTTGTCCCACT

BS15925.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-PA 888 CG13599-RA 58..884 847..21 4135 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 1029 CG13599-RA 132..962 847..17 4140 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23932054..23932661 624..17 3025 99.8 Minus
3R 32079331 3R 23931770..23931994 847..623 1125 100 Minus
Blast to na_te.dros performed on 2015-02-13 13:05:13 has no hits.

BS15925.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:20 Download gff for BS15925.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-PA 58..888 17..847 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:53:06 Download gff for BS15925.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 132..969 7..847 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:25:12 Download gff for BS15925.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 132..969 7..847 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:25:12 Download gff for BS15925.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23931770..23931994 623..847 100 -> Minus
3R 23932056..23932668 7..622 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:53:06 Download gff for BS15925.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19757492..19757716 623..847 100 -> Minus
arm_3R 19757778..19758390 7..622 99   Minus

BS15925.5prime Sequence

783 bp (740 high quality bases) assembled on 2007-04-16

> BS15925.5prime
GAAGTTATCCCTCGACATGGATCAAAATGTCAAGAATGTTGATCTTAAAC
TGGATAACATTGAGGTTCTGACCAGTGGGACAACAGCGGAGTTCGTGAAT
GGCATCCTGGACTTCTTGCTCTATCAACGCCGGCAAATCCCCTTCGTGTA
CAAAACATACAAATATTATGTGGATAAATGGTCAGATGCTGATGAATCGG
GAGAATCCAAGGATCAGGAGTCCTTTGCTCATTACCAACGCAACCAGCAG
CGCTCTAAGGCAAAGGCCACCAAGGAATCTATTAGTGACATGAGAGAGAT
CATCCGACAAGCCTTCAGGAGCTCTGAAGTGAAGAGCCTGCGATTTCTTT
TTGGCAACAATATGTTCATGCCCTCGGAGGCCTATACTCTGCACATACCA
CATGATTCCATATCCAGAGATCACTATTGCGAGCACCATGCTCTGCCCGA
AGGTCGCATCAACCAGGCGCTGCTCCGCCTGCTCACCTGCGAGGAGCTGT
ACAGGCTATTCTCCACCGAACTAAAAGTCACCAACGTGTTTCTAGAAATG
GAGCTCCTTACAGACTCCGATCGACCCCAAGGATCCCATTGTGACTCCTT
TAATCTAATCCCAAAGCATATATTAAGCCAACTTCCGCGCAGCTGCAAGA
ACATACACCTGCATCTACTGCATTGCAGTGAAAACACACCGAATGAATTA
CGCTGCTGCAAGGAGATGGATATTTACCACGATCTTGGCGTGCGGAATCT
GGATAAATCTGGGGAAGACGTTAGCCAGACCAA

BS15925.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-PA 888 CG13599-RA 1..767 17..783 3835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-RA 1029 CG13599-RA 75..841 17..783 3835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:01:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23932054..23932540 297..783 2435 100 Plus
3R 32079331 3R 23931713..23931994 17..298 1410 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:01:07 has no hits.

BS15925.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:20 Download gff for BS15925.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-PA 1..765 17..781 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:19:41 Download gff for BS15925.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 68..839 9..781 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:11 Download gff for BS15925.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13599-RA 68..839 9..781 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:11 Download gff for BS15925.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23931706..23931994 9..298 98 -> Plus
3R 23932056..23932538 299..781 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:19:41 Download gff for BS15925.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19757428..19757716 9..298 98 -> Plus
arm_3R 19757778..19758260 299..781 100   Plus

BS15925.pep Sequence

Translation from 16 to 903

> BS15925.pep
MDQNVKNVDLKLDNIEVLTSGTTAEFVNGILDFLLYQRRQIPFVYKTYKY
YVDKWSDADESGESKDQESFAHYQRNQQRSKAKATKESISDMREIIRQAF
RSSEVKSLRFLFGNNMFMPSEAYTLHIPHDSISRDHYCEHHALPEGRINQ
ALLRLLTCEELYRLFSTELKVTNVFLEMELLTDSDRPQGSHCDSFNLIPK
HILSQLPRSCKNIHLHLLHCSENTPNELRCCKEMDIYHDLGVRNLDKSGE
DVSQTNEEHDVLKAANETSGWWQAEVIVRGFRAPGNQKSGDLWSS*

BS15925.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13599-PA 295 CG13599-PA 1..295 1..295 1566 100 Plus