Clone Sequence Records
BS15925.complete Sequence
920 bp assembled on 2010-02-09
GenBank Submission: KX804651
> BS15925.complete
GAAGTTATCAGTCGACATGGATCAAAATGTCAAGAATGTTGATCTTAAAC
TGGATAACATTGAGGTTCTGACCAGTGGGACAACAGCGGAGTTCGTGAAT
GGCATCCTGGACTTCTTGCTCTATCAACGCCGGCAAATCCCCTTCGTGTA
CAAAACATACAAATATTATGTGGATAAATGGTCAGATGCTGATGAATCGG
GAGAATCCAAGGATCAGGAGTCCTTTGCTCATTACCAACGCAACCAGCAG
CGCTCTAAGGCAAAGGCCACCAAGGAATCTATTAGTGACATGAGAGAGAT
CATCCGACAAGCCTTCAGGAGCTCTGAAGTGAAGAGCCTGCGATTTCTTT
TTGGCAACAATATGTTCATGCCCTCGGAGGCCTATACTCTGCACATACCA
CATGATTCCATATCCAGAGATCACTATTGCGAGCACCATGCTCTGCCCGA
AGGTCGCATCAACCAGGCGCTGCTCCGCCTGCTCACCTGCGAGGAGCTGT
ACAGGCTATTCTCCACCGAACTAAAAGTCACCAACGTGTTTCTAGAAATG
GAGCTCCTTACAGACTCCGATCGACCCCAAGGATCCCATTGTGACTCCTT
TAATCTAATCCCAAAGCATATATTAAGCCAACTTCCGCGCAGCTGCAAGA
ACATACACCTGCATCTACTGCATTGCAGTGAAAACACACCGAATGAATTA
CGCTGCTGCAAGGAGATGGATATTTACCACGATCTTGGCGTGCGGAATCT
GGATAAATCTGGGGAAGACGTTAGCCAGACCAACGAAGAGCATGACGTTT
TGAAAGCAGCAAATGAAACCAGCGGTTGGTGGCAGGCCGAGGTCATAGTT
CGCGGTTTCAGAGCTCCTGGCAACCAAAAATCGGGAGATTTGTGGTCTAG
CTAAAAGCTTTCTAGACCAT
BS15925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:58:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13599-RA | 888 | CG13599-PA | 1..888 | 17..904 | 4440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:58:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13599-RA | 1029 | CG13599-RA | 75..962 | 17..904 | 4440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:58:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23932054..23932661 | 297..904 | 3040 | 100 | Plus |
3R | 32079331 | 3R | 23931713..23931994 | 17..298 | 1410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:58:18 has no hits.
BS15925.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:49 Download gff for
BS15925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 71..956 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:53 Download gff for
BS15925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 75..960 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:00:14 Download gff for
BS15925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 71..956 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:23 Download gff for
BS15925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 75..960 | 17..902 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:23 Download gff for
BS15925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23931713..23931994 | 17..298 | 100 | -> | Plus |
3R | 23932056..23932659 | 299..902 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:53 Download gff for
BS15925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19757435..19757716 | 17..298 | 100 | -> | Plus |
arm_3R | 19757778..19758381 | 299..902 | 100 | | Plus |
BS15925.3prime Sequence
847 bp (774 high quality bases) assembled on 2007-04-16
> BS15925.3prime
ATGGTCTAGAAAGCTTTTACCTAGACCACAAATCTCCCGATTTTTGGTTG
CCAGGAGCTCTGAAACCGCGAACTATGACCTCGGCCTGCCACCAACCGCT
GGTTTCATTTGCTGCTTTCAAAACGTCATGCTCTTCGTTGGTCTGGCTAA
CGTCTTCCCCAGATTTATCCAGATTCCGCACGCCAAGATCGTGGTAAATA
TCCATCTCCTTGCAGCAGCGTAATTCATTCGGTGTGTTTTCACTGCAATG
CAGTAGATGCAGGTGTATGTTCTTGCAGCTGCGCGGAAGTTGGCTTAATA
TATGCTTTGGGATTAGATTAAAGGAGTCACAATGGGATCCTTGGGGTCGA
TCGGAGTCTGTAAGGAGCTCCATTTCTAGAAACACGTTGGTGACTTTTAG
TTCGGTGGAGAATAGCCTGTACAGCTCCTCGCAGGTGAGCAGGCGGAGCA
GCGCCTGGTTGATGCGACCTTCGGGCAGAGCATGGTGCTCGCAATAGTGA
TCTCTGGATATGGAATCATGTGGTATGTGCAGAGTATAGGCCTCCGAGGG
CATGAACATATTGTTGCCAAAAAGAAATCGCAGGCTCTTCACTTCAGAGC
TCCTGAAGGCTTGTCGGATGATCTCTCTCATGTCACTAATAGATTCCTTG
GTGGCCTTTGCCTTAGAGCGCTGCTGGTTGCGTTGGTAATGAGCAAAGGA
CTCCTGATCCTTGGATTCTCCCGATTCATCAGCATCTGACCATTTATCCA
CATAATATTTGTATGTTTTGTACACGAAGGGGATTTGCCGGCGTTGATAG
AGCAAGAAGTCCAGGATGCCATTCACGAACTCCGCTGTTGTCCCACT
BS15925.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13599-PA | 888 | CG13599-RA | 58..884 | 847..21 | 4135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:05:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13599-RA | 1029 | CG13599-RA | 132..962 | 847..17 | 4140 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:05:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23932054..23932661 | 624..17 | 3025 | 99.8 | Minus |
3R | 32079331 | 3R | 23931770..23931994 | 847..623 | 1125 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:05:13 has no hits.
BS15925.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:20 Download gff for
BS15925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-PA | 58..888 | 17..847 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:53:06 Download gff for
BS15925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 132..969 | 7..847 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:25:12 Download gff for
BS15925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 132..969 | 7..847 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:25:12 Download gff for
BS15925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23931770..23931994 | 623..847 | 100 | -> | Minus |
3R | 23932056..23932668 | 7..622 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:53:06 Download gff for
BS15925.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19757492..19757716 | 623..847 | 100 | -> | Minus |
arm_3R | 19757778..19758390 | 7..622 | 99 | | Minus |
BS15925.5prime Sequence
783 bp (740 high quality bases) assembled on 2007-04-16
> BS15925.5prime
GAAGTTATCCCTCGACATGGATCAAAATGTCAAGAATGTTGATCTTAAAC
TGGATAACATTGAGGTTCTGACCAGTGGGACAACAGCGGAGTTCGTGAAT
GGCATCCTGGACTTCTTGCTCTATCAACGCCGGCAAATCCCCTTCGTGTA
CAAAACATACAAATATTATGTGGATAAATGGTCAGATGCTGATGAATCGG
GAGAATCCAAGGATCAGGAGTCCTTTGCTCATTACCAACGCAACCAGCAG
CGCTCTAAGGCAAAGGCCACCAAGGAATCTATTAGTGACATGAGAGAGAT
CATCCGACAAGCCTTCAGGAGCTCTGAAGTGAAGAGCCTGCGATTTCTTT
TTGGCAACAATATGTTCATGCCCTCGGAGGCCTATACTCTGCACATACCA
CATGATTCCATATCCAGAGATCACTATTGCGAGCACCATGCTCTGCCCGA
AGGTCGCATCAACCAGGCGCTGCTCCGCCTGCTCACCTGCGAGGAGCTGT
ACAGGCTATTCTCCACCGAACTAAAAGTCACCAACGTGTTTCTAGAAATG
GAGCTCCTTACAGACTCCGATCGACCCCAAGGATCCCATTGTGACTCCTT
TAATCTAATCCCAAAGCATATATTAAGCCAACTTCCGCGCAGCTGCAAGA
ACATACACCTGCATCTACTGCATTGCAGTGAAAACACACCGAATGAATTA
CGCTGCTGCAAGGAGATGGATATTTACCACGATCTTGGCGTGCGGAATCT
GGATAAATCTGGGGAAGACGTTAGCCAGACCAA
BS15925.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13599-PA | 888 | CG13599-RA | 1..767 | 17..783 | 3835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:01:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13599-RA | 1029 | CG13599-RA | 75..841 | 17..783 | 3835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:01:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23932054..23932540 | 297..783 | 2435 | 100 | Plus |
3R | 32079331 | 3R | 23931713..23931994 | 17..298 | 1410 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:01:07 has no hits.
BS15925.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:20 Download gff for
BS15925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-PA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:19:41 Download gff for
BS15925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 68..839 | 9..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:11 Download gff for
BS15925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13599-RA | 68..839 | 9..781 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:11 Download gff for
BS15925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23931706..23931994 | 9..298 | 98 | -> | Plus |
3R | 23932056..23932538 | 299..781 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:19:41 Download gff for
BS15925.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19757428..19757716 | 9..298 | 98 | -> | Plus |
arm_3R | 19757778..19758260 | 299..781 | 100 | | Plus |
BS15925.pep Sequence
Translation from 16 to 903
> BS15925.pep
MDQNVKNVDLKLDNIEVLTSGTTAEFVNGILDFLLYQRRQIPFVYKTYKY
YVDKWSDADESGESKDQESFAHYQRNQQRSKAKATKESISDMREIIRQAF
RSSEVKSLRFLFGNNMFMPSEAYTLHIPHDSISRDHYCEHHALPEGRINQ
ALLRLLTCEELYRLFSTELKVTNVFLEMELLTDSDRPQGSHCDSFNLIPK
HILSQLPRSCKNIHLHLLHCSENTPNELRCCKEMDIYHDLGVRNLDKSGE
DVSQTNEEHDVLKAANETSGWWQAEVIVRGFRAPGNQKSGDLWSS*
BS15925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13599-PA | 295 | CG13599-PA | 1..295 | 1..295 | 1566 | 100 | Plus |