Clone BS15926 Report

Search the DGRC for BS15926

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:26
Vector:pDNR-Dual
Associated Gene/Transcriptfu12-RA
Protein status:BS15926.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15926.3prime Sequence

804 bp (778 high quality bases) assembled on 2007-04-16

> BS15926.3prime
ATGGTCTAGAAAGCTTCTATGCCTGCTTCTTTGAGCTCAAGGCTTGGCCT
TCTTTGCTCAGCTTTGTGTACTCCGTCTGCATGATGGACTGGCATTCGTC
GATCAGCAGCTGCACGTCCTCCCTCTTGTACTTCTCGGTGGACACCTCGG
GTAGGATGTGGATTAGGGCGTGGCCAGGACGGAATGTCTTTTTCTCGTCA
TCCATGAATGAGTACTTCGATATGACCACCGGCTGAACGGGGCTCTTGCC
CTGCAGTGCGATGTGGAATGAGCCCTTCTTGAAGGGCAGCAACGAGTCCT
TGGAGTTGCGCGTTCCCTCAGGGAAGAGCAGTAGCTTGCAGTTGCGCTCC
TGTATCGCCTTCGCCTCCTTTTGCAGAGAGTTGATCGAGTCGGTCTTGCG
GGAGCGGTCGATGTATAGGGTACCCCAGAGCCATGCTCCAATGCCAAAGA
ATGGGATGTAGAGAACCTCCTTCTTGGAGACAACTGTTGCTCTTCCGATC
ACAGGCCACAAATAGGCCAGAACGCAAAGATCAACAGCACTTTGGTGGTT
CATTATCACCACTGCCCCATGGTCCTTACGGACATTCTCCAGACCACGAA
CCTCCATTGTTATGCCCACCAGGCGGCAAAGCTGCCGGAAGCACCATGAT
GGAAAAAGCGCATTTCGATAGTCTCGCGGTCGCAGAATCATAAAGGGCAC
GCACAGAAAGACTATCAGACCAGCTCCAAAAAATATAAAGAACATGCGCA
TCTGATAGGGAGCCTTGGCCGTGGCGCTTAGGATAAAGCCACCACGCAGG
CCAG

BS15926.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17608-PA 816 fu12-RA 28..816 804..17 3905 99.8 Minus
CG17608-PB 816 fu12-RB 28..816 804..17 3905 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
fu12-RC 2065 CG17608-RC 879..1667 804..17 3920 99.9 Minus
fu12-RD 1311 CG17608-RD 125..913 804..17 3920 99.9 Minus
fu12-RB 1335 CG17608-RB 149..937 804..17 3920 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:07:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8450089..8450728 17..656 3200 100 Plus
2L 23513712 2L 8450794..8450942 657..804 695 99.3 Plus
Blast to na_te.dros performed on 2015-02-13 16:07:20 has no hits.

BS15926.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:21 Download gff for BS15926.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17608-PB 28..816 17..804 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 12:56:53 Download gff for BS15926.3prime
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 149..941 12..804 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:27:21 Download gff for BS15926.3prime
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 149..941 12..804 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:27:21 Download gff for BS15926.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8450085..8450728 12..656 99 <- Plus
2L 8450794..8450942 657..804 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 12:56:53 Download gff for BS15926.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8450794..8450942 657..804 99   Plus
arm_2L 8450085..8450728 12..656 99 <- Plus

BS15926.5prime Sequence

814 bp (795 high quality bases) assembled on 2007-04-16

> BS15926.5prime
GAAGTTATCAGTCGACATGGCTTGTACATGCGAAGTTATTGGACTGGCCT
GCGTGGTGGCTTTAATCCTAAGCGCCACGGCCAAGGCTCCCTATCAGATG
CGCATGTTCTTTATATTTTTTGGAGCTGGTCTGATAGTCTTTCTGTGCGT
GCCCTTTATGATTCTGCGACCGCGAGACTATCGAAATGCGCTTTTTCCAT
CATGGTGCTTCCGGCAGCTTTGCCGCCTGGTGGGCATAACAATGGAGGTT
CGTGGTCTGGAGAATGTCCGTAAGGACCATGGGGCAGTGGTGATAATGAA
CCACCAAAGTGCTGTTGATCTTTGCGTTCTGGCCTATTTGTGGCCTGTGA
TCGGAAGAGCAACAGTTGTCTCCAAGAAGGAGGTTCTCTACATCCCATTC
TTTGGCATTGGAGCATGGCTCTGGGGTACCCTATACATCGACCGCTCCCG
CAAGACCGACTCGATCAACTCTCTGCAAAAGGAGGCGAAGGCGATACAGG
AGCGCAACTGCAAGCTACTGCTCTTCCCTGAGGGAACGCGCAACTCCAAG
GACTCGTTGCTGCCCTTCAAGAAGGGCTCATTCCACATCGCACTGCAGGG
CAAGAGCCCCGTTCAGCCGGTGGTCATATCGAAGTACTCATTCATGGATG
ACGAGAAAAAGACATTCCGTCCTGGCCACGCCCTAATCCACATCCTACCC
GAGGTGTCCACCGAGAAGTACAAGAGGGAGGACGTGCAGCTGCTGATCGA
CGAATGCCAGTCCATCATGCAGACGGAGTACACAAAGCTGAGCAAAGAAG
GCCAAGCCTTGAGC

BS15926.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:03:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG17608-PA 816 fu12-RA 1..798 17..814 3990 100 Plus
CG17608-PB 816 fu12-RB 1..798 17..814 3990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
fu12-RC 2065 CG17608-RC 852..1649 17..814 3990 100 Plus
fu12-RD 1311 CG17608-RD 98..895 17..814 3990 100 Plus
fu12-RB 1335 CG17608-RB 122..919 17..814 3990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8450107..8450728 814..193 3110 100 Minus
2L 23513712 2L 8450794..8450969 192..17 880 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:57:04 has no hits.

BS15926.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:21 Download gff for BS15926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17608-PB 1..798 17..814 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 20:24:08 Download gff for BS15926.5prime
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 122..919 17..814 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:28:32 Download gff for BS15926.5prime
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 122..919 17..814 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:28:32 Download gff for BS15926.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8450107..8450728 193..814 100 <- Minus
2L 8450794..8450969 17..192 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 20:24:08 Download gff for BS15926.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8450107..8450728 193..814 100 <- Minus
arm_2L 8450794..8450969 17..192 100   Minus

BS15926.complete Sequence

848 bp assembled on 2007-05-07

GenBank Submission: FJ637987

> BS15926.complete
GAAGTTATCAGTCGACATGGCTTGTACATGCGAAGTTATTGGACTGGCCT
GCGTGGTGGCTTTAATCCTAAGCGCCACGGCCAAGGCTCCCTATCAGATG
CGCATGTTCTTTATATTTTTTGGAGCTGGTCTGATAGTCTTTCTGTGCGT
GCCCTTTATGATTCTGCGACCGCGAGACTATCGAAATGCGCTTTTTCCAT
CATGGTGCTTCCGGCAGCTTTGCCGCCTGGTGGGCATAACAATGGAGGTT
CGTGGTCTGGAGAATGTCCGTAAGGACCATGGGGCAGTGGTGATAATGAA
CCACCAAAGTGCTGTTGATCTTTGCGTTCTGGCCTATTTGTGGCCTGTGA
TCGGAAGAGCAACAGTTGTCTCCAAGAAGGAGGTTCTCTACATCCCATTC
TTTGGCATTGGAGCATGGCTCTGGGGTACCCTATACATCGACCGCTCCCG
CAAGACCGACTCGATCAACTCTCTGCAAAAGGAGGCGAAGGCGATACAGG
AGCGCAACTGCAAGCTACTGCTCTTCCCTGAGGGAACGCGCAACTCCAAG
GACTCGTTGCTGCCCTTCAAGAAGGGCTCATTCCACATCGCACTGCAGGG
CAAGAGCCCCGTTCAGCCGGTGGTCATATCGAAGTACTCATTCATGGATG
ACGAGAAAAAGACATTCCGTCCTGGCCACGCCCTAATCCACATCCTACCC
GAGGTGTCCACCGAGAAGTACAAGAGGGAGGACGTGCAGCTGCTGATCGA
CGAATGCCAGTCCATCATGCAGACGGAGTACACAAAGCTGAGCAAAGAAG
GCCAAGCCTTGAGCTCAAAGAAGCAGGCATAGAAGCTTTCTAGACCAT

BS15926.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
fu12-RC 816 CG17608-PC 1..816 17..832 4080 100 Plus
fu12-RD 816 CG17608-PD 1..816 17..832 4080 100 Plus
fu12-RB 816 CG17608-PB 1..816 17..832 4080 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
fu12-RC 2065 CG17608-RC 852..1667 17..832 4080 100 Plus
fu12-RD 1311 CG17608-RD 98..913 17..832 4080 100 Plus
fu12-RB 1335 CG17608-RB 122..937 17..832 4080 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8450089..8450728 832..193 3200 100 Minus
2L 23513712 2L 8450794..8450969 192..17 880 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:53:13 has no hits.

BS15926.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:48 Download gff for BS15926.complete
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 1..816 17..832 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:30:51 Download gff for BS15926.complete
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 122..941 17..837 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:40 Download gff for BS15926.complete
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 122..937 17..832 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:49 Download gff for BS15926.complete
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 122..941 17..837 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:12 Download gff for BS15926.complete
Subject Subject Range Query Range Percent Splice Strand
fu12-RB 122..937 17..832 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:12 Download gff for BS15926.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8450089..8450728 193..832 100 <- Minus
2L 8450794..8450969 17..192 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:40 Download gff for BS15926.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8450089..8450728 193..832 100 <- Minus
arm_2L 8450794..8450969 17..192 100   Minus

BS15926.pep Sequence

Translation from 16 to 831

> BS15926.pep
MACTCEVIGLACVVALILSATAKAPYQMRMFFIFFGAGLIVFLCVPFMIL
RPRDYRNALFPSWCFRQLCRLVGITMEVRGLENVRKDHGAVVIMNHQSAV
DLCVLAYLWPVIGRATVVSKKEVLYIPFFGIGAWLWGTLYIDRSRKTDSI
NSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ
PVVISKYSFMDDEKKTFRPGHALIHILPEVSTEKYKREDVQLLIDECQSI
MQTEYTKLSKEGQALSSKKQA*

BS15926.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
fu12-PC 271 CG17608-PC 1..271 1..271 1410 100 Plus
fu12-PD 271 CG17608-PD 1..271 1..271 1410 100 Plus
fu12-PB 271 CG17608-PB 1..271 1..271 1410 100 Plus
fu12-PA 271 CG17608-PA 1..271 1..271 1410 100 Plus
CG3812-PC 343 CG3812-PC 4..267 1..261 426 36 Plus