Clone Sequence Records
BS15928.3prime Sequence
885 bp (784 high quality bases) assembled on 2007-04-16
> BS15928.3prime
ATGGTCTAGAAAGCTTCTAGGCTCGTGGGACGTAGTTGCCGGGGAATGTG
CCGAAGCAGCCGGTCCTCTGCGAGGTGCCCACGAACCATCCGTCGCCGCA
CTTCTCCAGCACATGGACCACATCTCCCTCGAGCAGTTCCAGTTCGTCGG
AGTTCTGGGGCCGGTACTTGTACAGTGCGCGGTACGCCAATGGTTCGGAA
CTGGTGTCCACATGGAGGGCGTCCGTCTTGTGAAGTGTCCGCGTTTCCTT
GAGGATTCCGTTCGGTGGCTGTGCTCCATTTTGCGTCAGCGTATTGAACT
CATTGTTGATGTTTGTGCGCAGCACGTCGAGATTGGGCCGCAGATTCGTG
GTGCTCTGGCTGGTGATCACGGTGGTTGTCCTGGCCGCAATGTCCTCAGC
ACCAATATCAGTAAGTACCTCCACGTAGGAGCACGGGAAGATGCCCTTCC
TGTTGGCAATCTTGCCCTCGAACCAGTTGCCATCCACTCGGCGTGTCAAA
GTGACCAATTCGCCCTTGTTCAAGGAGAGTTCAATGCCCGACTGGGCCTG
GAAGTTGTATTTGGCACGGGCCTGACCCTCCGATGGCCGTTTGGATGGGG
TACGGGCTCCATCTCGACTGACAATCTCAACATAGCTGGCTGGAAGCAGT
CCAATCATGGCATTGTGCTCGCCCTCATACCAGTTGGCATCAATCTGCCG
CCTGATGTAGATTGTGTCGCCCTTGCGGAAGGATAGCTCCTTCGAGGTCT
GTCCCTGGAAGTTAAAGAGAGCCCGGGCCACCGTCTTGGGGCCCACCAGC
GACTTGAGGGTCACGTCCGTGGGGAAGTCATCGTAGCGATTGAGGGCGAT
GGGCGACTTCTGCGACGGGGTGAAGTTGTCGGTGT
BS15928.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18408-PA | 7131 | CAP-RA | 6268..7118 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PF | 2436 | CAP-RF | 1573..2423 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PC | 2475 | CAP-RC | 1612..2462 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PB | 5205 | CAP-RB | 4342..5192 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PD | 1584 | CAP-RD | 721..1571 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PE | 942 | CAP-RE | 79..929 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PJ | 1698 | CAP-RJ | 835..1685 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PI | 1920 | CAP-RI | 1057..1907 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PH | 1503 | CAP-RH | 640..1490 | 880..30 | 4230 | 99.8 | Minus |
| CG18408-PG | 1503 | CAP-RG | 640..1490 | 880..30 | 4230 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:01:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CAP-RY | 8546 | CG18408-RY | 6967..7836 | 885..16 | 4260 | 99.3 | Minus |
| CAP-RX | 8834 | CG18408-RX | 7255..8124 | 885..16 | 4260 | 99.3 | Minus |
| CAP-RW | 5528 | CG18408-RW | 3949..4818 | 885..16 | 4260 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:01:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10305736..10305972 | 420..184 | 1185 | 100 | Minus |
| 2R | 25286936 | 2R | 10305470..10305680 | 627..417 | 1055 | 100 | Minus |
| 2R | 25286936 | 2R | 10306145..10306314 | 185..16 | 775 | 97.1 | Minus |
| 2R | 25286936 | 2R | 10304786..10304931 | 885..740 | 715 | 99.3 | Minus |
| 2R | 25286936 | 2R | 10304988..10305102 | 740..626 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:01:24 has no hits.
BS15928.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:22 Download gff for
BS15928.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18408-PG | 635..1503 | 17..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:19:43 Download gff for
BS15928.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RW | 3949..4818 | 16..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:14 Download gff for
BS15928.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RW | 3949..4818 | 16..885 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:14 Download gff for
BS15928.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10304786..10304930 | 741..885 | 99 | -> | Minus |
| 2R | 10304988..10305102 | 626..740 | 100 | -> | Minus |
| 2R | 10305472..10305678 | 419..625 | 100 | -> | Minus |
| 2R | 10305738..10305970 | 186..418 | 100 | -> | Minus |
| 2R | 10306145..10306314 | 16..185 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:19:43 Download gff for
BS15928.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6192291..6192435 | 741..885 | 99 | -> | Minus |
| arm_2R | 6192493..6192607 | 626..740 | 100 | -> | Minus |
| arm_2R | 6192977..6193183 | 419..625 | 100 | -> | Minus |
| arm_2R | 6193243..6193475 | 186..418 | 100 | -> | Minus |
| arm_2R | 6193650..6193819 | 16..185 | 97 | | Minus |
BS15928.5prime Sequence
893 bp (749 high quality bases) assembled on 2007-04-16
> BS15928.5prime
GAAGTTATCCTTCGAGGTGCTGAAGTTCTGCTCGCTGCGAAGGAGCAAGG
AGCCAGCGATTGTGGCTCCCAAAGTGGCCAAGAGTTCATCGCTGCGCCTG
AAGGATGTCCCGCTGAATGACGCCCAACTGCTCCAAGTGCTCCATGCCCA
GCGGGAGCGAGGACCTCTGATTTTGGCCCTGAGCAGTGCGAAAAATTCAG
TGCAAACTTGCCGGAAGTGCGGAACCCCCTACGAAAACCGTCAGGTGGTC
GAAAACGGAACAACAGCCCGTCCGTCGTACAAGAGCAACGGATACGTCTC
AGAGCCCGAGCCCAACTACGATTCGGATTACTCGACGGTGAGGTACCGCA
CCCAGAATCCGCACCGCGTTCAGTCCGTCTCCTCGGCTGTCAATGTGCGC
AACCTTAATCAGGACGAGAAGTTGTATGGTACTATGCCAAATCCCATAAA
ATCAGCGCAAAACTCGTATAAGAATCAGCCAGGTCGCATCGAAAACTATA
CGACAGGTCATTCGTCTGTTTCCGAAAAGGAAAAGAAGGAGTGGTGGGAC
GAAGTGATGGACATCTTTAACGGGAATCTAGAACAATCGAAACTATCGCC
ATTGTACACTGAAGGTAACTTGTCCAGAGCTTTGGCCAAGGAATCCGGCT
ATACTAGCGATTCCAATCTGGTCTTCCGTAAGAAGGAGGTACCCGTGAGC
AGTCCCCTTAGCCCCGTTGAACAAAAGCAGGCTTACAAGAGTCTCCAGGC
AGGGGGAGAGCCACCTCTGCTCGGCTTCCGTAAACAGCGCCCGAGAAACC
CCGTGATCTCGACCCGAACGCGCCCCCCATTCCCCCACAGCCACCAGTCA
AGGGTCTCTCCTCCTACGATTTTCCGTACAGCACCGACACCGT
BS15928.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:04:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18408-PI | 1920 | CAP-RI | 2..878 | 18..893 | 4320 | 99.7 | Plus |
| CG18408-PF | 2436 | CAP-RF | 765..1394 | 265..893 | 3085 | 99.6 | Plus |
| CG18408-PC | 2475 | CAP-RC | 804..1433 | 265..893 | 3085 | 99.6 | Plus |
| CG18408-PA | 7131 | CAP-RA | 5461..6089 | 266..893 | 3080 | 99.6 | Plus |
| CG18408-PJ | 1698 | CAP-RJ | 29..656 | 267..893 | 3075 | 99.6 | Plus |
| CG18408-PH | 1503 | CAP-RH | 1..461 | 434..893 | 2240 | 99.5 | Plus |
| CG18408-PG | 1503 | CAP-RG | 1..461 | 434..893 | 2240 | 99.5 | Plus |
| CG18408-PB | 5205 | CAP-RB | 108..341 | 574..806 | 1130 | 99.5 | Plus |
| CG18408-PB | 5205 | CAP-RB | 1..108 | 434..541 | 540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:50:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CAP-RI | 2663 | CG18408-RI | 34..910 | 18..893 | 4345 | 99.8 | Plus |
| CAP-RV | 8693 | CG18408-RV | 6311..6940 | 265..893 | 3110 | 99.7 | Plus |
| CAP-RU | 2872 | CG18408-RU | 490..1119 | 265..893 | 3110 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:50:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10295866..10296047 | 625..805 | 860 | 99.5 | Plus |
| 2R | 25286936 | 2R | 10294609..10294767 | 264..422 | 795 | 100 | Plus |
| 2R | 25286936 | 2R | 10294846..10294966 | 421..541 | 605 | 100 | Plus |
| 2R | 25286936 | 2R | 10269262..10269362 | 86..186 | 505 | 100 | Plus |
| 2R | 25286936 | 2R | 10300489..10300577 | 805..893 | 430 | 98.9 | Plus |
| 2R | 25286936 | 2R | 10269420..10269501 | 185..266 | 410 | 100 | Plus |
| 2R | 25286936 | 2R | 10269049..10269116 | 18..85 | 340 | 100 | Plus |
| 2R | 25286936 | 2R | 10295741..10295794 | 574..627 | 270 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 15:50:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 6232..6267 | 220..255 | 108 | 77.8 | Plus |
BS15928.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:23 Download gff for
BS15928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18408-PI | 2..878 | 18..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 07:42:53 Download gff for
BS15928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RI | 28..910 | 12..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:16:37 Download gff for
BS15928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RI | 28..910 | 12..893 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:16:37 Download gff for
BS15928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10269043..10269116 | 12..85 | 97 | -> | Plus |
| 2R | 10269262..10269362 | 86..186 | 100 | -> | Plus |
| 2R | 10269422..10269501 | 187..266 | 100 | -> | Plus |
| 2R | 10294612..10294765 | 267..420 | 100 | -> | Plus |
| 2R | 10294846..10294966 | 421..541 | 100 | -> | Plus |
| 2R | 10295291..10295323 | 542..574 | 100 | -> | Plus |
| 2R | 10295742..10295794 | 575..627 | 100 | -> | Plus |
| 2R | 10295869..10296047 | 628..805 | 99 | -> | Plus |
| 2R | 10300490..10300577 | 806..893 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 07:42:53 Download gff for
BS15928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6187995..6188082 | 806..893 | 98 | | Plus |
| arm_2R | 6156548..6156621 | 12..85 | 97 | -> | Plus |
| arm_2R | 6156767..6156867 | 86..186 | 100 | -> | Plus |
| arm_2R | 6156927..6157006 | 187..266 | 100 | -> | Plus |
| arm_2R | 6182117..6182270 | 267..420 | 100 | -> | Plus |
| arm_2R | 6182351..6182471 | 421..541 | 100 | -> | Plus |
| arm_2R | 6182796..6182828 | 542..574 | 100 | -> | Plus |
| arm_2R | 6183247..6183299 | 575..627 | 100 | -> | Plus |
| arm_2R | 6183374..6183552 | 628..805 | 99 | -> | Plus |
BS15928.complete Sequence
1952 bp assembled on 2009-12-07
GenBank Submission: KX800287
> BS15928.complete
GAAGTTATCAGTCGACATGCTGAAGTTCTGCTCGCTGCGAAGGAGCAAGG
AGCCAGCGATTGTGGCTCCCAAAGTGGCCAAGAGTTCATCGCTGCGCCTG
AAGGATGTCCCGCTGAATGACGCCCAACTGCTCCAAGTGCTCCATGCCCA
GCGGGAGCGAGGACCTCTGATTTTGGCCCTGAGCAGTGCGAAAAATTCAG
TGCAAACTTGCCGGAAGTGCGGAACCCCCTACGAAAACCGTCAGGTGGTC
GAAAACGGAACAACAGCCCGTCCGTCGTACAAGAGCAACGGATACGTCTC
AGAGCCCGAGCCCAACTACGATTCGGATTACTCGACGGTGAGGTACCGCA
CCCAGAATCCGCACCGCGTTCAGTCCGTCTCCTCGGCTGTCAATGTGCGC
AACCTTAATCAGGACGAGAAGTTGTATGGTACTATGCCAAATCCCATAAA
ATCAGCGCAAAACTCGTATAAGAATCAGCCAGGTCGCATCGAAAACTATA
CGACAGGTCATTCGTCTGTTTCCGAAAAGGAAAAGAAGGAGTGGTGGGAC
GAAGTGATGGACATCTTTAACGGGAATCTAGAACAATCGAAACTATCGCC
ATTGTACACTGAAGGTAACTTGTCCAGAGCTTTGGCCAAGGAATCCGGCT
ATACTAGCGATTCCAATCTGGTCTTCCGTAAGAAGGAGGTACCCGTGAGC
AGTCCCCTTAGCCCCGTTGAACAAAAGCAGGCTTACAAGAGTCTCCAGGC
AGGGGGAGAGCCACCTCTGCTCGGCTTCCGTAAACCAGCGCCCGAGAAAC
CCCGTGATCTCGACCCGAACGCGCCCCCCATTCCCCCACAGCCACCAGTC
AAGGGTCTCTCCTCCTACGATTTCCCGTACAGCACCGACACCGTCGACGG
ATCAGACGTGAACATCCACTTCAAGACCCCCATCAGGCATGAGCAGCGTC
AGAACTTGTCGGAAGAGGAACTAGCCATTCGCCAAGCGGAGCACATGCAG
AAGCTCTACCACGAGGAGCGCCGTCGCAAGTATCTACAGGAGCTGCAGGA
CATGAATTCGCGCCGCCACACGGACAACTTCACCCCGTCGCAGAAGTCGC
CCATCGCCCTCAATCGCTACGATGACTTCCCCACGGACGTGACCCTCAAG
TCGCTGGTGGGCCCCAAGACGGTGGCCCGGGCTCTCTTTAACTTCCAGGG
ACAGACCTCGAAGGAGCTATCCTTCCGCAAGGGCGACACAATCTACATCA
GGCGGCAGATTGATGCCAACTGGTATGAGGGCGAGCACAATGCCATGATT
GGACTGCTTCCAGCCAGCTATGTTGAGATTGTCAGTCGAGATGGAGCCCG
TACCCCATCCAAACGGCCATCGGAGGGTCAGGCCCGTGCCAAATACAACT
TCCAGGCCCAGTCGGGCATTGAACTCTCCTTGAACAAGGGCGAATTGGTC
ACTTTGACACGCCGAGTGGATGGCAACTGGTTCGAGGGCAAGATTGCCAA
CAGGAAGGGCATCTTCCCGTGCTCCTACGTGGAGGTACTTACTGATATTG
GTGCTGAGGACATTGCGGCCAGGACAACCACCGTGATCACCAGCCAGAGC
ACCACGAATCTGCGGCCCAATCTCGACGTGCTGCGCACAAACATCAACAA
TGAGTTCAATACGCTGACGCAAAATGGAGCACAGCCACCGAACGGAATCC
TCAAGGAAACGCGGACACTTCACAAGACGGACGCCCTCCATGTGGACACC
AGTTCCGAACCATTGGCGTACCGCGCACTGTACAAGTACCGGCCCCAGAA
CTCCGACGAACTGGAACTGCTCGAGGGAGATGTGGTCCATGTGCTGGAGA
AGTGCGACGACGGATGGTTCGTGGGCACCTCGCAGAGGACCGGCTGCTTC
GGCACATTCCCCGGCAACTACGTGGAACGGGCCTAGAAGCTTTCTAGACC
AT
BS15928.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:43:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CAP-RI | 1920 | CG18408-PI | 1..1920 | 17..1936 | 9600 | 100 | Plus |
| CAP-RV | 7377 | CG18408-PV | 5706..7377 | 265..1936 | 8360 | 100 | Plus |
| CAP-RU | 2025 | CG18408-PU | 354..2025 | 265..1936 | 8360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:43:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CAP-RI | 2663 | CG18408-RI | 27..1953 | 11..1937 | 9635 | 100 | Plus |
| CAP-RV | 8693 | CG18408-RV | 6311..7983 | 265..1937 | 8365 | 100 | Plus |
| CAP-RU | 2872 | CG18408-RU | 490..2162 | 265..1937 | 8365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:43:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10304621..10304931 | 903..1213 | 1555 | 100 | Plus |
| 2R | 25286936 | 2R | 10305736..10305972 | 1533..1769 | 1185 | 100 | Plus |
| 2R | 25286936 | 2R | 10305470..10305680 | 1326..1536 | 1055 | 100 | Plus |
| 2R | 25286936 | 2R | 10295866..10296047 | 625..806 | 910 | 100 | Plus |
| 2R | 25286936 | 2R | 10306145..10306314 | 1768..1937 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 10294609..10294767 | 264..422 | 795 | 100 | Plus |
| 2R | 25286936 | 2R | 10294846..10294966 | 421..541 | 605 | 100 | Plus |
| 2R | 25286936 | 2R | 10304988..10305102 | 1213..1327 | 575 | 100 | Plus |
| 2R | 25286936 | 2R | 10269262..10269362 | 86..186 | 505 | 100 | Plus |
| 2R | 25286936 | 2R | 10300489..10300588 | 806..905 | 500 | 100 | Plus |
| 2R | 25286936 | 2R | 10269420..10269501 | 185..266 | 410 | 100 | Plus |
| 2R | 25286936 | 2R | 10269042..10269116 | 11..85 | 375 | 100 | Plus |
| 2R | 25286936 | 2R | 10295741..10295794 | 574..627 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:43:20 has no hits.
BS15928.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:42 Download gff for
BS15928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RI | 1..1920 | 17..1936 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:49 Download gff for
BS15928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RI | 26..1945 | 17..1936 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:55:50 Download gff for
BS15928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RI | 33..1952 | 17..1936 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:35:08 Download gff for
BS15928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RI | 26..1945 | 17..1936 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:18 Download gff for
BS15928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CAP-RI | 33..1952 | 17..1936 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:18 Download gff for
BS15928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10306145..10306313 | 1768..1936 | 100 | | Plus |
| 2R | 10269048..10269116 | 17..85 | 100 | -> | Plus |
| 2R | 10269262..10269362 | 86..186 | 100 | -> | Plus |
| 2R | 10269422..10269501 | 187..266 | 100 | -> | Plus |
| 2R | 10294612..10294765 | 267..420 | 100 | -> | Plus |
| 2R | 10294846..10294966 | 421..541 | 100 | -> | Plus |
| 2R | 10295291..10295323 | 542..574 | 100 | -> | Plus |
| 2R | 10295742..10295794 | 575..627 | 100 | -> | Plus |
| 2R | 10295869..10296047 | 628..806 | 100 | -> | Plus |
| 2R | 10300490..10300588 | 807..905 | 100 | -> | Plus |
| 2R | 10304624..10304930 | 906..1212 | 100 | -> | Plus |
| 2R | 10304988..10305102 | 1213..1327 | 100 | -> | Plus |
| 2R | 10305472..10305678 | 1328..1534 | 100 | -> | Plus |
| 2R | 10305738..10305970 | 1535..1767 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:55:50 Download gff for
BS15928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6193650..6193818 | 1768..1936 | 100 | | Plus |
| arm_2R | 6156553..6156621 | 17..85 | 100 | -> | Plus |
| arm_2R | 6156767..6156867 | 86..186 | 100 | -> | Plus |
| arm_2R | 6156927..6157006 | 187..266 | 100 | -> | Plus |
| arm_2R | 6182117..6182270 | 267..420 | 100 | -> | Plus |
| arm_2R | 6182351..6182471 | 421..541 | 100 | -> | Plus |
| arm_2R | 6182796..6182828 | 542..574 | 100 | -> | Plus |
| arm_2R | 6183247..6183299 | 575..627 | 100 | -> | Plus |
| arm_2R | 6183374..6183552 | 628..806 | 100 | -> | Plus |
| arm_2R | 6187995..6188093 | 807..905 | 100 | -> | Plus |
| arm_2R | 6192129..6192435 | 906..1212 | 100 | -> | Plus |
| arm_2R | 6192493..6192607 | 1213..1327 | 100 | -> | Plus |
| arm_2R | 6192977..6193183 | 1328..1534 | 100 | -> | Plus |
| arm_2R | 6193243..6193475 | 1535..1767 | 100 | -> | Plus |
BS15928.pep Sequence
Translation from 16 to 1935
> BS15928.pep
MLKFCSLRRSKEPAIVAPKVAKSSSLRLKDVPLNDAQLLQVLHAQRERGP
LILALSSAKNSVQTCRKCGTPYENRQVVENGTTARPSYKSNGYVSEPEPN
YDSDYSTVRYRTQNPHRVQSVSSAVNVRNLNQDEKLYGTMPNPIKSAQNS
YKNQPGRIENYTTGHSSVSEKEKKEWWDEVMDIFNGNLEQSKLSPLYTEG
NLSRALAKESGYTSDSNLVFRKKEVPVSSPLSPVEQKQAYKSLQAGGEPP
LLGFRKPAPEKPRDLDPNAPPIPPQPPVKGLSSYDFPYSTDTVDGSDVNI
HFKTPIRHEQRQNLSEEELAIRQAEHMQKLYHEERRRKYLQELQDMNSRR
HTDNFTPSQKSPIALNRYDDFPTDVTLKSLVGPKTVARALFNFQGQTSKE
LSFRKGDTIYIRRQIDANWYEGEHNAMIGLLPASYVEIVSRDGARTPSKR
PSEGQARAKYNFQAQSGIELSLNKGELVTLTRRVDGNWFEGKIANRKGIF
PCSYVEVLTDIGAEDIAARTTTVITSQSTTNLRPNLDVLRTNINNEFNTL
TQNGAQPPNGILKETRTLHKTDALHVDTSSEPLAYRALYKYRPQNSDELE
LLEGDVVHVLEKCDDGWFVGTSQRTGCFGTFPGNYVERA*
BS15928.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CAP-PI | 639 | CG18408-PI | 1..639 | 1..639 | 3343 | 100 | Plus |
| CAP-PV | 2458 | CG18408-PV | 1903..2458 | 84..639 | 2926 | 100 | Plus |
| CAP-PU | 674 | CG18408-PU | 119..674 | 84..639 | 2926 | 100 | Plus |
| CAP-PO | 630 | CG18408-PO | 75..630 | 84..639 | 2926 | 100 | Plus |
| CAP-PK | 630 | CG18408-PK | 75..630 | 84..639 | 2926 | 100 | Plus |
