Clone Sequence Records
BS15929.complete Sequence
872 bp assembled on 2010-02-09
GenBank Submission: KX805801
> BS15929.complete
GAAGTTATCAGTCGACATGAGTGGATACACGGACCTCACCAAGCTGGAGA
CAAGTCGAAACTGCCTGCGCCGCATCGCCCGTCACGATGAGCAGCAGTTC
TCCAAAGACAGCATTGTCAATGTGATGGAAAAGTTTGTAAAGACTGTCAA
CATTATGGACGACACCATACTGGTGCCATGCAGGCTCATGGATCGGCAGA
TCGGCGACAGCACTGACATCATCCCAGCAACCGGCAAGGACTCGACCGCC
AACCAGCTGACACAGACCTCCAGTGCCCACGGCAAGCGGGGAGCGGCGCA
TTCAAAAAATGTCCAAGACTTTCTCAGCGCCTCCGAGCTGTTCAATCTGT
ACAACATGCTGAACTCCCTGAAAAAAGATCTGCTTTGGACCGCCAACCAG
GAGGACGACGACCAGCAGCACTCCGAACAGCAGCTCAACGCCAGTACCAG
TTCCACTTCGAGCTGCAATCCCAGCGAGAGCAAGACTGAATTCAACAGCG
GCAGTCCAAGCACAACCGCATCCGGAAGTGTCAAGGGTCATGTGCGCCGT
ACCTCTACCGCATCCATGATGTCCACCAACTCGGTGAGCAACATGAGTGA
CTCTGACTCGGACATATCGCAGGAAAACGACTCGGGGCTAGAGTCCGATG
GCAACAAGAGCGACAACGCCCAAAGCAGCGACGGCAGCGACATTGTAGAC
GTCGCCAAATCGAAGCCGGGCTCGGGGGACAAGGCCACGGAGCTGGCCAA
GCGCTGCCGGAGGCATCTTAACGGTCTGTACCAGTGCCTGGAACAAATGA
CAGAGGCGGCCAACTACCTGACCGCCAGATACCAAAGTGATATTGGGCCC
GTCTAGAAGCTTTCTAGACCAT
BS15929.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:29:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2765-RF | 732 | CG2765-PF | 1..732 | 125..856 | 3660 | 100 | Plus |
CG2765-RD | 732 | CG2765-PD | 1..732 | 125..856 | 3660 | 100 | Plus |
CG2765-RE | 732 | CG2765-PE | 1..732 | 125..856 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:29:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2765-RF | 2310 | CG2765-RF | 457..1304 | 9..856 | 4210 | 99.8 | Plus |
CG2765-RD | 2648 | CG2765-RD | 843..1642 | 57..856 | 4000 | 100 | Plus |
CG2765-RE | 2072 | CG2765-RE | 267..1066 | 57..856 | 4000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:29:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24960847..24961506 | 856..197 | 3300 | 100 | Minus |
2R | 25286936 | 2R | 24961606..24961748 | 199..57 | 715 | 100 | Minus |
2R | 25286936 | 2R | 24964572..24964620 | 57..9 | 215 | 95.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:29:23 has no hits.
BS15929.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:38 Download gff for
BS15929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RA | 472..1311 | 17..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:12 Download gff for
BS15929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RF | 465..1304 | 17..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:11:05 Download gff for
BS15929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RA | 472..1311 | 17..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:04 Download gff for
BS15929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RF | 465..1304 | 17..856 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:04 Download gff for
BS15929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24960847..24961503 | 200..856 | 100 | <- | Minus |
2R | 24961606..24961747 | 58..199 | 100 | <- | Minus |
2R | 24964572..24964612 | 17..57 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:12 Download gff for
BS15929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20848370..20849026 | 200..856 | 100 | <- | Minus |
arm_2R | 20849129..20849270 | 58..199 | 100 | <- | Minus |
arm_2R | 20852095..20852135 | 17..57 | 100 | | Minus |
BS15929.3prime Sequence
870 bp (770 high quality bases) assembled on 2007-04-16
> BS15929.3prime
ATGGTCTAGAAAGCTTCTACCCTGGCGGGATATCACTTTGGTATCTGGCG
GTCAGGTAGTTGGCCGCCTCTGTCATTTGTTCCAGGCACTGGTACAGACC
GTTAAGATGCCTCCGGCAGCGCTTGGCCAGCTCCGTGGCCTTGTCCCCCG
AGCCCGGCTTCGATTTGGCGACGTCTACAATGTCGCTGCCGTCGCTGCTT
TGGGCGTTGTCGCTCTTGTTGCCATCGGACTCTAGCCCCGAGTCGTTTTC
CTGCGATATGTCCGAGTCAGAGTCACTCATGTTGCTCACCGAGTTGGTGG
ACATCATGGATGCGGTAGAGGTACGGCGCACATGACCCTTGACACTTCCG
GATGCGGTTGTGCTTGGACTGCCGCTGTTGAATTCAGTCTTGCTCTCGCT
GGGATTGCAGCTCGAAGTGGAACTGGTACTGGCGTTGAGCTGCTGTTCGG
AGTGCTGCTGGTCGTCGTCCTCCTGGTTGGCGGTCCAAAGCAGATCTTTT
TTCAGGGAGTTCAGCATGTTGTACAGATTGAACAGCTCGGAGGCGCTGAG
AAAGTCTTGGACATTTTTTGAATGCGCCGCTCCCCGCTTGCCGTGGGCAC
TGGAGGTCTGTGTCAGCTGGTTGGCGGTCGAGTCCTTGCCGGTTGCTGGG
ATGATGTCAGTGCTGTCGCCGATCTGCCGATCCATGAGCCTGCATGGCAC
CAGTATGGTGTCGTCCATAATGTTGACAGTCTTTACAAACTTTTCCATCA
CATTGACAATGCTGTCTTTGGAGAACTGCTGCTCATCGTGACGGGCGATG
CGGCGCAGGCAGTTTCGACTTGTCTCCAGCTTGGTGAGGTCCGTGTATCC
ACTCATGTCGACTGATAACT
BS15929.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:04:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2765-PA | 840 | CG2765-RA | 1..827 | 856..30 | 4135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2765-RF | 2310 | CG2765-RF | 457..1291 | 864..30 | 4145 | 99.8 | Minus |
CG2765-RD | 2648 | CG2765-RD | 843..1629 | 816..30 | 3935 | 100 | Minus |
CG2765-RE | 2072 | CG2765-RE | 267..1053 | 816..30 | 3935 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:22:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24960860..24961506 | 30..676 | 3235 | 100 | Plus |
2R | 25286936 | 2R | 24961606..24961748 | 674..816 | 715 | 100 | Plus |
2R | 25286936 | 2R | 24964572..24964620 | 816..864 | 215 | 95.9 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:22:27 has no hits.
BS15929.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:23 Download gff for
BS15929.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-PA | 1..833 | 24..856 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:48:08 Download gff for
BS15929.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RF | 457..1297 | 24..864 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:27:21 Download gff for
BS15929.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RF | 457..1297 | 24..864 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:27:21 Download gff for
BS15929.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24960854..24961503 | 24..673 | 99 | <- | Plus |
2R | 24961606..24961747 | 674..815 | 100 | <- | Plus |
2R | 24964572..24964620 | 816..864 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:48:08 Download gff for
BS15929.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20848377..20849026 | 24..673 | 99 | <- | Plus |
arm_2R | 20849129..20849270 | 674..815 | 100 | <- | Plus |
arm_2R | 20852095..20852143 | 816..864 | 96 | | Plus |
BS15929.5prime Sequence
870 bp (788 high quality bases) assembled on 2007-04-16
> BS15929.5prime
GAAGTTATCCGTCGAGGTGAGTGGATACACGGACCTCACCAAGCTGGAGA
CAAGTCGAAACTGCCTGCGCCGCATCGCCCGTCACGATGAGCAGCAGTTC
TCCAAAGACAGCATTGTCAATGTGATGGAAAAGTTTGTAAAGACTGTCAA
CATTATGGACGACACCATACTGGTGCCATGCAGGCTCATGGATCGGCAGA
TCGGCGACAGCACTGACATCATCCCAGCAACCGGCAAGGACTCGACCGCC
AACCAGCTGACACAGACCTCCAGTGCCCACGGCAAGCGGGGAGCGGCGCA
TTCAAAAAATGTCCAAGACTTTCTCAGCGCCTCCGAGCTGTTCAATCTGT
ACAACATGCTGAACTCCCTGAAAAAAGATCTGCTTTGGACCGCCAACCAG
GAGGACGACGACCAGCAGCACTCCGAACAGCAGCTCAACGCCAGTACCAG
TTCCACTTCGAGCTGCAATCCCAGCGAGAGCAAGACTGAATTCAACAGCG
GCAGTCCAAGCACAACCGCATCCGGAAGTGTCAAGGGTCATGTGCGCCGT
ACCTCTACCGCATCCATGATGTCCACCAACTCGGTGAGCAACATGAGTGA
CTCTGACTCGGACATATCGCAGGAAAACGACTCGGGGCTAGAGTCCGATG
GCAACAAGAGCGACAACGCCCAAAGCAGCGACGGCAGCGACATTGTAGAC
GTCGCCAAATCGAAGCCGGGCTCGGGGGACAAGGCCACGGAGCTGGCCAA
GCGCTGCCGGAGGCATCTTAACGGTCTGTACCAGTGCCTGGAACAAATGA
CAGAGGCGGCCAACTACCTGACCGCCAGATACCAAAGTGATATTGGGCCC
GTCTAGAAGCTTTCTAGACC
BS15929.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:04:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2765-PA | 840 | CG2765-RA | 2..840 | 18..856 | 4195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:37:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2765-RF | 2310 | CG2765-RF | 466..1304 | 18..856 | 4195 | 100 | Plus |
CG2765-RD | 2648 | CG2765-RD | 843..1642 | 57..856 | 4000 | 100 | Plus |
CG2765-RE | 2072 | CG2765-RE | 267..1066 | 57..856 | 4000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:37:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24960847..24961506 | 856..197 | 3300 | 100 | Minus |
2R | 25286936 | 2R | 24961606..24961748 | 199..57 | 715 | 100 | Minus |
2R | 25286936 | 2R | 24964572..24964611 | 57..18 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:37:45 has no hits.
BS15929.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:23 Download gff for
BS15929.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-PA | 2..840 | 18..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:11:07 Download gff for
BS15929.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RF | 463..1304 | 12..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:50:45 Download gff for
BS15929.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2765-RF | 463..1304 | 12..856 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:50:45 Download gff for
BS15929.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24960847..24961503 | 200..856 | 100 | <- | Minus |
2R | 24961606..24961747 | 58..199 | 100 | <- | Minus |
2R | 24964572..24964614 | 12..57 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:11:07 Download gff for
BS15929.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20848370..20849026 | 200..856 | 100 | <- | Minus |
arm_2R | 20849129..20849270 | 58..199 | 100 | <- | Minus |
arm_2R | 20852095..20852137 | 12..57 | 93 | | Minus |
BS15929.pep Sequence
Translation from 16 to 855
> BS15929.pep
MSGYTDLTKLETSRNCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDT
ILVPCRLMDRQIGDSTDIIPATGKDSTANQLTQTSSAHGKRGAAHSKNVQ
DFLSASELFNLYNMLNSLKKDLLWTANQEDDDQQHSEQQLNASTSSTSSC
NPSESKTEFNSGSPSTTASGSVKGHVRRTSTASMMSTNSVSNMSDSDSDI
SQENDSGLESDGNKSDNAQSSDGSDIVDVAKSKPGSGDKATELAKRCRRH
LNGLYQCLEQMTEAANYLTARYQSDIGPV*
BS15929.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:09:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2765-PF | 243 | CG2765-PF | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PD | 243 | CG2765-PD | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PE | 243 | CG2765-PE | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PC | 243 | CG2765-PC | 1..243 | 37..279 | 1238 | 100 | Plus |