Clone BS15929 Report

Search the DGRC for BS15929

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG2765-RC
Protein status:BS15929.pep: full length peptide match
Sequenced Size:872

Clone Sequence Records

BS15929.complete Sequence

872 bp assembled on 2010-02-09

GenBank Submission: KX805801

> BS15929.complete
GAAGTTATCAGTCGACATGAGTGGATACACGGACCTCACCAAGCTGGAGA
CAAGTCGAAACTGCCTGCGCCGCATCGCCCGTCACGATGAGCAGCAGTTC
TCCAAAGACAGCATTGTCAATGTGATGGAAAAGTTTGTAAAGACTGTCAA
CATTATGGACGACACCATACTGGTGCCATGCAGGCTCATGGATCGGCAGA
TCGGCGACAGCACTGACATCATCCCAGCAACCGGCAAGGACTCGACCGCC
AACCAGCTGACACAGACCTCCAGTGCCCACGGCAAGCGGGGAGCGGCGCA
TTCAAAAAATGTCCAAGACTTTCTCAGCGCCTCCGAGCTGTTCAATCTGT
ACAACATGCTGAACTCCCTGAAAAAAGATCTGCTTTGGACCGCCAACCAG
GAGGACGACGACCAGCAGCACTCCGAACAGCAGCTCAACGCCAGTACCAG
TTCCACTTCGAGCTGCAATCCCAGCGAGAGCAAGACTGAATTCAACAGCG
GCAGTCCAAGCACAACCGCATCCGGAAGTGTCAAGGGTCATGTGCGCCGT
ACCTCTACCGCATCCATGATGTCCACCAACTCGGTGAGCAACATGAGTGA
CTCTGACTCGGACATATCGCAGGAAAACGACTCGGGGCTAGAGTCCGATG
GCAACAAGAGCGACAACGCCCAAAGCAGCGACGGCAGCGACATTGTAGAC
GTCGCCAAATCGAAGCCGGGCTCGGGGGACAAGGCCACGGAGCTGGCCAA
GCGCTGCCGGAGGCATCTTAACGGTCTGTACCAGTGCCTGGAACAAATGA
CAGAGGCGGCCAACTACCTGACCGCCAGATACCAAAGTGATATTGGGCCC
GTCTAGAAGCTTTCTAGACCAT

BS15929.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG2765-RF 732 CG2765-PF 1..732 125..856 3660 100 Plus
CG2765-RD 732 CG2765-PD 1..732 125..856 3660 100 Plus
CG2765-RE 732 CG2765-PE 1..732 125..856 3660 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG2765-RF 2310 CG2765-RF 457..1304 9..856 4210 99.8 Plus
CG2765-RD 2648 CG2765-RD 843..1642 57..856 4000 100 Plus
CG2765-RE 2072 CG2765-RE 267..1066 57..856 4000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24960847..24961506 856..197 3300 100 Minus
2R 25286936 2R 24961606..24961748 199..57 715 100 Minus
2R 25286936 2R 24964572..24964620 57..9 215 95.9 Minus
Blast to na_te.dros performed on 2014-11-28 04:29:23 has no hits.

BS15929.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:38 Download gff for BS15929.complete
Subject Subject Range Query Range Percent Splice Strand
CG2765-RA 472..1311 17..856 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:12 Download gff for BS15929.complete
Subject Subject Range Query Range Percent Splice Strand
CG2765-RF 465..1304 17..856 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:11:05 Download gff for BS15929.complete
Subject Subject Range Query Range Percent Splice Strand
CG2765-RA 472..1311 17..856 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:04 Download gff for BS15929.complete
Subject Subject Range Query Range Percent Splice Strand
CG2765-RF 465..1304 17..856 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:04 Download gff for BS15929.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24960847..24961503 200..856 100 <- Minus
2R 24961606..24961747 58..199 100 <- Minus
2R 24964572..24964612 17..57 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:12 Download gff for BS15929.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20848370..20849026 200..856 100 <- Minus
arm_2R 20849129..20849270 58..199 100 <- Minus
arm_2R 20852095..20852135 17..57 100   Minus

BS15929.3prime Sequence

870 bp (770 high quality bases) assembled on 2007-04-16

> BS15929.3prime
ATGGTCTAGAAAGCTTCTACCCTGGCGGGATATCACTTTGGTATCTGGCG
GTCAGGTAGTTGGCCGCCTCTGTCATTTGTTCCAGGCACTGGTACAGACC
GTTAAGATGCCTCCGGCAGCGCTTGGCCAGCTCCGTGGCCTTGTCCCCCG
AGCCCGGCTTCGATTTGGCGACGTCTACAATGTCGCTGCCGTCGCTGCTT
TGGGCGTTGTCGCTCTTGTTGCCATCGGACTCTAGCCCCGAGTCGTTTTC
CTGCGATATGTCCGAGTCAGAGTCACTCATGTTGCTCACCGAGTTGGTGG
ACATCATGGATGCGGTAGAGGTACGGCGCACATGACCCTTGACACTTCCG
GATGCGGTTGTGCTTGGACTGCCGCTGTTGAATTCAGTCTTGCTCTCGCT
GGGATTGCAGCTCGAAGTGGAACTGGTACTGGCGTTGAGCTGCTGTTCGG
AGTGCTGCTGGTCGTCGTCCTCCTGGTTGGCGGTCCAAAGCAGATCTTTT
TTCAGGGAGTTCAGCATGTTGTACAGATTGAACAGCTCGGAGGCGCTGAG
AAAGTCTTGGACATTTTTTGAATGCGCCGCTCCCCGCTTGCCGTGGGCAC
TGGAGGTCTGTGTCAGCTGGTTGGCGGTCGAGTCCTTGCCGGTTGCTGGG
ATGATGTCAGTGCTGTCGCCGATCTGCCGATCCATGAGCCTGCATGGCAC
CAGTATGGTGTCGTCCATAATGTTGACAGTCTTTACAAACTTTTCCATCA
CATTGACAATGCTGTCTTTGGAGAACTGCTGCTCATCGTGACGGGCGATG
CGGCGCAGGCAGTTTCGACTTGTCTCCAGCTTGGTGAGGTCCGTGTATCC
ACTCATGTCGACTGATAACT

BS15929.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG2765-PA 840 CG2765-RA 1..827 856..30 4135 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG2765-RF 2310 CG2765-RF 457..1291 864..30 4145 99.8 Minus
CG2765-RD 2648 CG2765-RD 843..1629 816..30 3935 100 Minus
CG2765-RE 2072 CG2765-RE 267..1053 816..30 3935 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:22:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24960860..24961506 30..676 3235 100 Plus
2R 25286936 2R 24961606..24961748 674..816 715 100 Plus
2R 25286936 2R 24964572..24964620 816..864 215 95.9 Plus
Blast to na_te.dros performed on 2015-02-13 06:22:27 has no hits.

BS15929.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:23 Download gff for BS15929.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2765-PA 1..833 24..856 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:48:08 Download gff for BS15929.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2765-RF 457..1297 24..864 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:27:21 Download gff for BS15929.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2765-RF 457..1297 24..864 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:27:21 Download gff for BS15929.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 24960854..24961503 24..673 99 <- Plus
2R 24961606..24961747 674..815 100 <- Plus
2R 24964572..24964620 816..864 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:48:08 Download gff for BS15929.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20848377..20849026 24..673 99 <- Plus
arm_2R 20849129..20849270 674..815 100 <- Plus
arm_2R 20852095..20852143 816..864 96   Plus

BS15929.5prime Sequence

870 bp (788 high quality bases) assembled on 2007-04-16

> BS15929.5prime
GAAGTTATCCGTCGAGGTGAGTGGATACACGGACCTCACCAAGCTGGAGA
CAAGTCGAAACTGCCTGCGCCGCATCGCCCGTCACGATGAGCAGCAGTTC
TCCAAAGACAGCATTGTCAATGTGATGGAAAAGTTTGTAAAGACTGTCAA
CATTATGGACGACACCATACTGGTGCCATGCAGGCTCATGGATCGGCAGA
TCGGCGACAGCACTGACATCATCCCAGCAACCGGCAAGGACTCGACCGCC
AACCAGCTGACACAGACCTCCAGTGCCCACGGCAAGCGGGGAGCGGCGCA
TTCAAAAAATGTCCAAGACTTTCTCAGCGCCTCCGAGCTGTTCAATCTGT
ACAACATGCTGAACTCCCTGAAAAAAGATCTGCTTTGGACCGCCAACCAG
GAGGACGACGACCAGCAGCACTCCGAACAGCAGCTCAACGCCAGTACCAG
TTCCACTTCGAGCTGCAATCCCAGCGAGAGCAAGACTGAATTCAACAGCG
GCAGTCCAAGCACAACCGCATCCGGAAGTGTCAAGGGTCATGTGCGCCGT
ACCTCTACCGCATCCATGATGTCCACCAACTCGGTGAGCAACATGAGTGA
CTCTGACTCGGACATATCGCAGGAAAACGACTCGGGGCTAGAGTCCGATG
GCAACAAGAGCGACAACGCCCAAAGCAGCGACGGCAGCGACATTGTAGAC
GTCGCCAAATCGAAGCCGGGCTCGGGGGACAAGGCCACGGAGCTGGCCAA
GCGCTGCCGGAGGCATCTTAACGGTCTGTACCAGTGCCTGGAACAAATGA
CAGAGGCGGCCAACTACCTGACCGCCAGATACCAAAGTGATATTGGGCCC
GTCTAGAAGCTTTCTAGACC

BS15929.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG2765-PA 840 CG2765-RA 2..840 18..856 4195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG2765-RF 2310 CG2765-RF 466..1304 18..856 4195 100 Plus
CG2765-RD 2648 CG2765-RD 843..1642 57..856 4000 100 Plus
CG2765-RE 2072 CG2765-RE 267..1066 57..856 4000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:37:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24960847..24961506 856..197 3300 100 Minus
2R 25286936 2R 24961606..24961748 199..57 715 100 Minus
2R 25286936 2R 24964572..24964611 57..18 200 100 Minus
Blast to na_te.dros performed on 2015-02-11 04:37:45 has no hits.

BS15929.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:23 Download gff for BS15929.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2765-PA 2..840 18..856 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:11:07 Download gff for BS15929.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2765-RF 463..1304 12..856 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:50:45 Download gff for BS15929.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2765-RF 463..1304 12..856 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:50:45 Download gff for BS15929.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24960847..24961503 200..856 100 <- Minus
2R 24961606..24961747 58..199 100 <- Minus
2R 24964572..24964614 12..57 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:11:07 Download gff for BS15929.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20848370..20849026 200..856 100 <- Minus
arm_2R 20849129..20849270 58..199 100 <- Minus
arm_2R 20852095..20852137 12..57 93   Minus

BS15929.pep Sequence

Translation from 16 to 855

> BS15929.pep
MSGYTDLTKLETSRNCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDT
ILVPCRLMDRQIGDSTDIIPATGKDSTANQLTQTSSAHGKRGAAHSKNVQ
DFLSASELFNLYNMLNSLKKDLLWTANQEDDDQQHSEQQLNASTSSTSSC
NPSESKTEFNSGSPSTTASGSVKGHVRRTSTASMMSTNSVSNMSDSDSDI
SQENDSGLESDGNKSDNAQSSDGSDIVDVAKSKPGSGDKATELAKRCRRH
LNGLYQCLEQMTEAANYLTARYQSDIGPV*

BS15929.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:09:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG2765-PF 243 CG2765-PF 1..243 37..279 1238 100 Plus
CG2765-PD 243 CG2765-PD 1..243 37..279 1238 100 Plus
CG2765-PE 243 CG2765-PE 1..243 37..279 1238 100 Plus
CG2765-PC 243 CG2765-PC 1..243 37..279 1238 100 Plus