Clone Sequence Records
BS15933.3prime Sequence
549 bp (549 high quality bases) assembled on 2007-04-16
> BS15933.3prime
ATGGTCTAGAAAGCTTTTAGGCCTTGTTGCCCTTGCCGGAACGCCTCTTC
ACGGAGGTGCGACGGCGAGCACCGCCACGACCACGTCGTCCACCGCGCCT
GCGTCCACCTCGTCGTCCGCCACGGCGCACGGATTTGCGTGCACTACGAC
GACCTCCACGGCGACCACCGCGGCGTCCACCACGACGACGACCGGCACGA
ACGATGCGGCGGGCACGGGCGTCATCCTTGTTGGGCTTCACGATGGTGTC
CTTGTTGTTGGTGGCGGTCTCCTTGTCCTCTTTGTTGTCGCTGCCCTCGG
CAACATCATCGCTGCGTCCCTCCAGTCTGTCATTCTGCTCCTCCTGCTCC
TGGCGCTCCAGGTCTTGCTCCTGGGCGGCCAGCTCGGAGTCTTCCTTGTT
GTCCGACGTCTTCTCGACCAGCTCGGAGCCACGGCGAGAGCTGAGAACTC
GGCTGCGCTGGGCCGCCGCCTCGGTGGAGAACACCAGACAGCAGAGAGCC
GCCAGGGCAAAGATCAGTGTATATTTGGCTGACATGTCGACTGATAACT
BS15933.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:05:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-PA | 519 | CG31813-RA | 1..519 | 535..17 | 2595 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:12:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 893 | CG31813-RB | 52..574 | 539..17 | 2600 | 99.8 | Minus |
CG31813-RA | 653 | CG31813-RA | 52..574 | 539..17 | 2600 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:12:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13736189..13736711 | 539..17 | 2600 | 99.8 | Minus |
Blast to na_te.dros performed 2015-02-12 17:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 382..427 | 113 | 71.7 | Plus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 75..207 | 106 | 55.7 | Plus |
BS15933.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:26 Download gff for
BS15933.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-PA | 1..519 | 17..535 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:11:28 Download gff for
BS15933.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..580 | 11..543 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:29:28 Download gff for
BS15933.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..580 | 11..543 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:29:28 Download gff for
BS15933.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13736186..13736717 | 11..543 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:11:28 Download gff for
BS15933.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13736186..13736717 | 11..543 | 99 | | Minus |
BS15933.5prime Sequence
549 bp (549 high quality bases) assembled on 2007-04-16
> BS15933.5prime
GAAGTTATCAGTCGACATGTCAGCCAAATATACACTGATCTTTGCCCTGG
CGGCTCTCTGCTGTCTGGTGTTCTCCACCGAGGCGGCGGCCCAGCGCAGC
CGAGTTCTCAGCTCTCGCCGTGGCTCCGAGCTGGTCGAGAAGACGTCGGA
CAACAAGGAAGACTCCGAGCTGGCCGCCCAGGAGCAAGACCTGGAGCGCC
AGGAGCAGGAGGAGCAGAATGACAGACTGGAGGGACGCAGCGATGATGTT
GCCGAGGGCAGCGACAACAAAGAGGACAAGGAGACCGCCACCAACAACAA
GGACACCATCGTGAAGCCCAACAAGGATGACGCCCGTGCCCGCCGCATCG
TTCGTGCCGGTCGTCGTCGTGGTGGACGCCGCGGTGGTCGCCGTGGAGGT
CGTCGTAGTGCACGCAAATCCGTGCGCCGTGGCGGACGACGAGGTGGACG
CAGGCGCGGTGGACGACGTGGTCGTGGCGGTGCTCGCCGTCGCACCTCCG
TGAAGAGGCGTTCCGGCAAGGGCAACAAGGCCTAAAAGCTTTCTAGACC
BS15933.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:05:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-PA | 519 | CG31813-RA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:36:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 893 | CG31813-RB | 52..574 | 13..535 | 2600 | 99.8 | Plus |
CG31813-RA | 653 | CG31813-RA | 52..574 | 13..535 | 2600 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:36:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13736189..13736711 | 13..535 | 2600 | 99.8 | Plus |
Blast to na_te.dros performed 2015-02-10 15:36:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 170..125 | 113 | 71.7 | Minus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 477..345 | 106 | 55.7 | Minus |
BS15933.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:26 Download gff for
BS15933.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-PA | 1..519 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 06:55:10 Download gff for
BS15933.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..580 | 9..541 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:11 Download gff for
BS15933.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 49..580 | 9..541 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:11 Download gff for
BS15933.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13736186..13736717 | 9..541 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 06:55:10 Download gff for
BS15933.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13736186..13736717 | 9..541 | 99 | | Plus |
BS15933.complete Sequence
551 bp assembled on 2007-05-07
> BS15933.complete
GAAGTTATCAGTCGACATGTCAGCCAAATATACACTGATCTTTGCCCTGG
CGGCTCTCTGCTGTCTGGTGTTCTCCACCGAGGCGGCGGCCCAGCGCAGC
CGAGTTCTCAGCTCTCGCCGTGGCTCCGAGCTGGTCGAGAAGACGTCGGA
CAACAAGGAAGACTCCGAGCTGGCCGCCCAGGAGCAAGACCTGGAGCGCC
AGGAGCAGGAGGAGCAGAATGACAGACTGGAGGGACGCAGCGATGATGTT
GCCGAGGGCAGCGACAACAAAGAGGACAAGGAGACCGCCACCAACAACAA
GGACACCATCGTGAAGCCCAACAAGGATGACGCCCGTGCCCGCCGCATCG
TTCGTGCCGGTCGTCGTCGTGGTGGACGCCGCGGTGGTCGCCGTGGAGGT
CGTCGTAGTGCACGCAAATCCGTGCGCCGTGGCGGACGACGAGGTGGACG
CAGGCGCGGTGGACGACGTGGTCGTGGCGGTGCTCGCCGTCGCACCTCCG
TGAAGAGGCGTTCCGGCAAGGGCAACAAGGCCTAAAAGCTTTCTAGACCA
T
BS15933.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:32:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 519 | CG31813-PB | 1..519 | 17..535 | 2595 | 100 | Plus |
CG31813-RA | 519 | CG31813-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:32:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-RB | 893 | CG31813-RB | 52..574 | 13..535 | 2600 | 99.8 | Plus |
CG31813-RA | 653 | CG31813-RA | 52..574 | 13..535 | 2600 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:32:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13736189..13736711 | 13..535 | 2600 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-27 20:32:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 170..125 | 113 | 71.7 | Minus |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 477..345 | 106 | 55.7 | Minus |
BS15933.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:42 Download gff for
BS15933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 1..519 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:58:45 Download gff for
BS15933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 47..578 | 9..541 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:11:22 Download gff for
BS15933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 56..572 | 17..533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:42 Download gff for
BS15933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 47..578 | 9..541 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:33 Download gff for
BS15933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31813-RA | 56..572 | 17..533 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:33 Download gff for
BS15933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13736193..13736709 | 17..533 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:11:22 Download gff for
BS15933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13736193..13736709 | 17..533 | 100 | | Plus |
BS15933.pep Sequence
Translation from 16 to 534
> BS15933.pep
MSAKYTLIFALAALCCLVFSTEAAAQRSRVLSSRRGSELVEKTSDNKEDS
ELAAQEQDLERQEQEEQNDRLEGRSDDVAEGSDNKEDKETATNNKDTIVK
PNKDDARARRIVRAGRRRGGRRGGRRGGRRSARKSVRRGGRRGGRRRGGR
RGRGGARRRTSVKRRSGKGNKA*
BS15933.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:00:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31813-PB | 172 | CG31813-PB | 1..172 | 1..172 | 862 | 100 | Plus |
CG31813-PA | 172 | CG31813-PA | 1..172 | 1..172 | 862 | 100 | Plus |