Clone BS15951 Report

Search the DGRC for BS15951

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptwun-RB
Protein status:BS15951.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15951.3prime Sequence

800 bp (715 high quality bases) assembled on 2007-04-16

> BS15951.3prime
ATGGTCTAGAAAGCTTTTAGTTTGTAGTAATCGTTATGGCCTGGGCCGGC
GATGCATTCATGTCTTGCACTGTACGCGCCAAATAGGGCTTCGTGTTGGG
CTTTTGAAACAAGTCGGAGACATAGTTGGCCACGACCAGTGCGCTTATGG
AGCCAATAAGCGATCCTGCCAGCACATCGGACCAGTGGTGCTTGTAGTCC
GATACGCGACTTAGGGCTGTGTACCAGGCCACCATGATGAACAGGAACTG
GAGAAGGTGACGCAGCAGCTTGGAGCCCCGCCAGGTCATGCGAGCCTGCA
GGTAGAGCGCCAGATAGACCATGGCGAAGAAGGTGAAGCTGGAGTGGCCA
CTGGGGAAGGAGAGGCGCATCTCTTTGAGCATGCGCGCCGACGATCCAAC
TCCCTTGCATGTGAACTCCTGGATGTATTTTCCCGCATTGATCGCATCGT
CGCAGGTGCTGCCGTCGGCCATTTGAGGCTGGCACACCGCGATGAAATGG
GGACGCAGTCGGCCGATGGAGTACTTGGCTATATCCGTGGTCAGCTGGCT
GAGCACAGCGCCGAAGGCATAGATGCCGATCTTCTTGTAGCACTCGATCA
TCCAGTCGGGCAGTTCGTAGTTCATAAAGACGTACCTTCGACTGGTTGCA
TTGCCATTATCCTGCTTGGCCTTGTTCTGTGAAATGATGACCTCCACGAT
GAATATCACGCCGACTGGTATCACAGCTCCGATGAAGTATAGCATCCAAT
TCCGGACCGTAAAATCGTGGAACGGGTGCTTTAGTGACTCGTCATCGCAA

BS15951.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG8804-PB 1140 wun-RB 358..1140 799..17 3865 99.7 Minus
CG8804-PA 903 wun-RA 121..903 799..17 3865 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:29:13
Subject Length Description Subject Range Query Range Score Percent Strand
wun-RA 1626 CG8804-RA 340..1122 799..17 3885 99.7 Minus
wun-RB 2026 CG8804-RB 740..1522 799..17 3885 99.7 Minus
wun-RC 1563 CG8804-RC 740..1408 799..131 3315 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:29:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9403705..9403926 486..707 1110 100 Plus
2R 25286936 2R 9402656..9402836 308..488 905 100 Plus
2R 25286936 2R 9402408..9402586 130..308 895 100 Plus
2R 25286936 2R 9401035..9401149 17..131 575 100 Plus
2R 25286936 2R 9404307..9404399 707..799 435 97.8 Plus
3L 28110227 3L 22472833..22473048 367..152 210 73.1 Minus
2R 25286936 2R 9417435..9417540 267..162 200 79.2 Minus
Blast to na_te.dros performed on 2015-02-10 23:29:11 has no hits.

BS15951.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:38 Download gff for BS15951.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8804-PA 122..903 17..798 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:58:37 Download gff for BS15951.3prime
Subject Subject Range Query Range Percent Splice Strand
wun-RB 741..1522 17..798 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:55:52 Download gff for BS15951.3prime
Subject Subject Range Query Range Percent Splice Strand
wun-RB 741..1522 17..798 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:55:52 Download gff for BS15951.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 9402656..9402835 308..487 100 <- Plus
2R 9403707..9403925 488..706 100 <- Plus
2R 9404307..9404398 707..798 97   Plus
2R 9401035..9401148 17..130 100 <- Plus
2R 9402409..9402585 131..307 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:58:37 Download gff for BS15951.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5288540..5288653 17..130 100 <- Plus
arm_2R 5289914..5290090 131..307 100 <- Plus
arm_2R 5290161..5290340 308..487 100 <- Plus
arm_2R 5291212..5291430 488..706 100 <- Plus
arm_2R 5291812..5291903 707..798 97   Plus

BS15951.5prime Sequence

928 bp (748 high quality bases) assembled on 2007-04-16

> BS15951.5prime
GAAGTTATCAGTCGACATGCCAGCCGTGAAAATAATAATGAGTACCGAAA
CGTCGGCGAGCGAGACAACACCGCTGCGGCGGTCGGAAAACGAAACACCT
GACCATAAAGAACTGGCCCAAAGTAACAGCAACAGTCGACAAACAACAGT
TAATAGCAACAACAATAACTACAGTAACTCGGTGCAAGTGCGTCTGCAGG
AACAGGACAGAGATAGCGACAGCGAGCAACAACAACATACTGCCACCATC
ACCATGGATACCAACAAAAGAATCCTCTGCCGCGTGGGCTTGGATGTTTT
AATCTTGCTCTGCGCTGGATTTCCCATACTGCTGTTTTTCCTGCTGGGCG
AGCCGTACAAGCGGGGCTTCTTCTGCGATGACGAGTCACTGAAGCACCCG
TTCCACGATTCTACGGTCCGGAATTGGATGCTATACTTCATCGGAGCTGT
GATACCAGTCGGCGTGATATTCATCGTGGAGGTCATCATTTCACAGAACA
AGGCCAAGCAGGATAATGGCAATGCAACCAGTCGAAGGTACGTCTTTATG
AACTACGAACTGCCCGACTGGATGATCGAGTGCTACAAGAAGATCGGCAT
CTATGCCTTCGGCGCTGTGCTCAGCCAGCTGACCACGGATATAGCCAAGT
ACTCCATCGGCCGACTGCGTCCCCATTTCATCGCGGTGTGCCAGCCTCAA
ATGGCCGACGGCAGCACCTGCGACGATGCGATCAATGCGGGAAAATACAT
CCAGGAGTTCACATGCAAGGGAGTTGGATCGTCGGCGCGCATGCTCAAAG
AGATGCGCCTCTCCTTCCCCAGTGGCCACTCCAGCTTCACCTTCTTCGCC
ATGGTCTATCTGGCGCTCTACCTGCAGGCTCGCATGACCTGGCGGGGGCT
CCAAGCTGCTGCGTCACCTTTCCCAGTT

BS15951.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:09:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG8804-PB 1140 wun-RB 1..903 17..920 4480 99.8 Plus
CG8804-PA 903 wun-RA 1..666 254..920 3295 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
wun-RC 1563 CG8804-RC 383..1293 17..928 4505 99.7 Plus
wun-RB 2026 CG8804-RB 383..1293 17..928 4505 99.7 Plus
wun-RA 1626 CG8804-RA 1..893 35..928 4415 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9409213..9409510 314..17 1490 100 Minus
2R 25286936 2R 9403705..9403926 687..466 1110 100 Minus
2R 25286936 2R 9402656..9402836 865..685 905 100 Minus
2R 25286936 2R 9404307..9404459 466..314 765 100 Minus
2R 25286936 2R 9402524..9402586 928..865 240 95.3 Minus
Blast to na_te.dros performed on 2015-02-10 20:58:03 has no hits.

BS15951.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:38 Download gff for BS15951.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8804-PB 1..911 17..928 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:58:40 Download gff for BS15951.5prime
Subject Subject Range Query Range Percent Splice Strand
wun-RB 377..1293 9..928 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:38:40 Download gff for BS15951.5prime
Subject Subject Range Query Range Percent Splice Strand
wun-RB 377..1293 9..928 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:38:40 Download gff for BS15951.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9402656..9402835 686..865 100 <- Minus
2R 9402524..9402585 866..928 95 <- Minus
2R 9403707..9403925 467..685 100 <- Minus
2R 9404307..9404458 315..466 100 <- Minus
2R 9409213..9409516 9..314 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:58:40 Download gff for BS15951.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5290029..5290090 866..928 95 <- Minus
arm_2R 5291212..5291430 467..685 100 <- Minus
arm_2R 5290161..5290340 686..865 100 <- Minus
arm_2R 5291812..5291963 315..466 100 <- Minus
arm_2R 5296718..5297021 9..314 98   Minus

BS15951.complete Sequence

1172 bp assembled on 2007-05-07

GenBank Submission: FJ637992

> BS15951.complete
GAAGTTATCAGTCGACATGCCAGCCGTGAAAATAATAATGAGTACCGAAA
CGTCGGCGAGCGAGACAACACCGCTGCGGCGGTCGGAAAACGAAACACCT
GACCATAAAGAACTGGCCCAAAGTAACAGCAACAGTCGACAAACAACAGT
TAATAGCAACAACAATAACTACAGTAACTCGGTGCAAGTGCGTCTGCAGG
AACAGGACAGAGATAGCGACAGCGAGCAACAACAACATACTGCCACCATC
ACCATGGATACCAACAAAAGAATCCTCTGCCGCGTGGGCTTGGATGTTTT
AATCTTGCTCTGCGCTGGATTTCCCATACTGCTGTTTTTCCTGCTGGGCG
AGCCGTACAAGCGGGGCTTCTTCTGCGATGACGAGTCACTGAAGCACCCG
TTCCACGATTCTACGGTCCGGAATTGGATGCTATACTTCATCGGAGCTGT
GATACCAGTCGGCGTGATATTCATCGTGGAGGTCATCATTTCACAGAACA
AGGCCAAGCAGGATAATGGCAATGCAACCAGTCGAAGGTACGTCTTTATG
AACTACGAACTGCCCGACTGGATGATCGAGTGCTACAAGAAGATCGGCAT
CTATGCCTTCGGCGCTGTGCTCAGCCAGCTGACCACGGATATAGCCAAGT
ACTCCATCGGCCGACTGCGTCCCCATTTCATCGCGGTGTGCCAGCCTCAA
ATGGCCGACGGCAGCACCTGCGACGATGCGATCAATGCGGGAAAATACAT
CCAGGAGTTCACATGCAAGGGAGTTGGATCGTCGGCGCGCATGCTCAAAG
AGATGCGCCTCTCCTTCCCCAGTGGCCACTCCAGCTTCACCTTCTTCGCC
ATGGTCTATCTGGCGCTCTACCTGCAGGCTCGCATGACCTGGCGGGGCTC
CAAGCTGCTGCGTCACCTTCTCCAGTTCCTGTTCATCATGGTGGCCTGGT
ACACAGCCCTAAGTCGCGTATCGGACTACAAGCACCACTGGTCCGATGTG
CTGGCAGGATCGCTTATTGGCTCCATAAGCGCACTGGTCGTGGCCAACTA
TGTCTCCGACTTGTTTCAAAAGCCCAACACGAAGCCCTATTTGGCGCGTA
CAGTGCAAGACATGAATGCATCGCCGGCCCAGGCCATAACGATTACTACA
AACTAAAAGCTTTCTAGACCAT

BS15951.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
wun-RB 1140 CG8804-PB 1..1140 17..1156 5700 100 Plus
wun-RC 1095 CG8804-PC 1..1026 17..1042 5130 100 Plus
wun-RA 903 CG8804-PA 1..903 254..1156 4515 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
wun-RB 2026 CG8804-RB 383..1522 17..1156 5700 100 Plus
wun-RA 1626 CG8804-RA 1..1122 35..1156 5610 100 Plus
wun-RC 1563 CG8804-RC 383..1408 17..1042 5130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9409213..9409510 314..17 1490 100 Minus
2R 25286936 2R 9403705..9403926 687..466 1110 100 Minus
2R 25286936 2R 9402656..9402836 865..685 905 100 Minus
2R 25286936 2R 9402408..9402586 1043..865 895 100 Minus
2R 25286936 2R 9404307..9404459 466..314 765 100 Minus
2R 25286936 2R 9401035..9401149 1156..1042 575 100 Minus
3L 28110227 3L 22472833..22473048 806..1021 210 73.1 Plus
2R 25286936 2R 9417435..9417540 906..1011 200 79.2 Plus
Blast to na_te.dros performed on 2014-11-27 01:57:02 has no hits.

BS15951.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:38 Download gff for BS15951.complete
Subject Subject Range Query Range Percent Splice Strand
wun-RB 1..1140 17..1156 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:30:39 Download gff for BS15951.complete
Subject Subject Range Query Range Percent Splice Strand
wun-RB 374..1519 9..1156 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:41 Download gff for BS15951.complete
Subject Subject Range Query Range Percent Splice Strand
wun-RB 383..1520 17..1154 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:38 Download gff for BS15951.complete
Subject Subject Range Query Range Percent Splice Strand
wun-RB 374..1519 9..1156 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:34:50 Download gff for BS15951.complete
Subject Subject Range Query Range Percent Splice Strand
wun-RB 383..1520 17..1154 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:34:50 Download gff for BS15951.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9401037..9401148 1043..1154 100 <- Minus
2R 9402409..9402585 866..1042 100 <- Minus
2R 9402656..9402835 686..865 100 <- Minus
2R 9403707..9403925 467..685 100 <- Minus
2R 9404307..9404458 315..466 100 <- Minus
2R 9409213..9409510 17..314 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:41 Download gff for BS15951.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5291212..5291430 467..685 100 <- Minus
arm_2R 5291812..5291963 315..466 100 <- Minus
arm_2R 5288542..5288653 1043..1154 100 <- Minus
arm_2R 5289914..5290090 866..1042 100 <- Minus
arm_2R 5290161..5290340 686..865 100 <- Minus
arm_2R 5296718..5297015 17..314 100   Minus

BS15951.pep Sequence

Translation from 16 to 1155

> BS15951.pep
MPAVKIIMSTETSASETTPLRRSENETPDHKELAQSNSNSRQTTVNSNNN
NYSNSVQVRLQEQDRDSDSEQQQHTATITMDTNKRILCRVGLDVLILLCA
GFPILLFFLLGEPYKRGFFCDDESLKHPFHDSTVRNWMLYFIGAVIPVGV
IFIVEVIISQNKAKQDNGNATSRRYVFMNYELPDWMIECYKKIGIYAFGA
VLSQLTTDIAKYSIGRLRPHFIAVCQPQMADGSTCDDAINAGKYIQEFTC
KGVGSSARMLKEMRLSFPSGHSSFTFFAMVYLALYLQARMTWRGSKLLRH
LLQFLFIMVAWYTALSRVSDYKHHWSDVLAGSLIGSISALVVANYVSDLF
QKPNTKPYLARTVQDMNASPAQAITITTN*

BS15951.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
wun-PB 379 CG8804-PB 1..379 1..379 1969 100 Plus
wun-PC 364 CG8804-PC 1..343 1..343 1781 99.7 Plus
wun-PA 300 CG8804-PA 1..300 80..379 1573 100 Plus
wun2-PA 350 CG8805-PA 8..347 13..344 799 45.6 Plus
wun2-PB 246 CG8805-PB 1..243 104..344 716 54.3 Plus