Clone Sequence Records
BS15976.3prime Sequence
492 bp (492 high quality bases) assembled on 2007-04-16
> BS15976.3prime
ATGGTCTAGAAAGCTTCTACTTGGCGTTGCCGTCGTCGTCGATCGCCTTG
AAGATGATTCCGTAGACATGGTCCACCAGCTTGGCCCACGTGGCCGCTTG
ACTCTCGTCCAGACTGCAGGCAGCTGTCAGCACATCCAGGATAACTCCTT
TCAGTTGGTTGTAAGACTCCTTGGAAACGGTCCGCGGAATGTGACTAACG
GCAATTTTGGTCCAGATCTCGTCCAGCTTCTCCAGATCGCCATCCTGGCC
CAGGACCTGGATGGACTCGTCAAAGACCCTTATGATTCTGCCGGCATGTG
CTCGGAAGCGAGCATTTCCACTTAGCTCCTCCAAAGGAACATCGCGGAAG
GGGAACTTCTCCAAGTTGGACGGAAAGCGGTTGAAAAACTGCGTCAGTAT
CGCCGCTCCAGAATCTGTTGGTGTTGCCACGGGGATTTCCCAGGTCTTCT
TGATCAGTTGCACCTCATCGCTGTTCATGTCGACTGATAACT
BS15976.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:15:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9734-PC | 462 | glob1-RC | 1..462 | 478..17 | 2310 | 100 | Minus |
CG9734-PB | 462 | glob1-RB | 1..462 | 478..17 | 2310 | 100 | Minus |
CG9734-PA | 462 | glob1-RA | 1..462 | 478..17 | 2310 | 100 | Minus |
CG9734-PD | 462 | glob1-RD | 1..462 | 478..17 | 2310 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:06:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 921 | CG9734-RF | 101..565 | 480..16 | 2325 | 100 | Minus |
glob1-RD | 1143 | CG9734-RD | 323..787 | 480..16 | 2325 | 100 | Minus |
glob1-RA | 1274 | CG9734-RA | 454..918 | 480..16 | 2325 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:06:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15897548..15897709 | 158..319 | 810 | 100 | Plus |
3R | 32079331 | 3R | 15897774..15897935 | 319..480 | 810 | 100 | Plus |
3R | 32079331 | 3R | 15897282..15897423 | 16..157 | 710 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:06:20 has no hits.
BS15976.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:56 Download gff for
BS15976.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9734-PD | 1..462 | 17..478 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:53:13 Download gff for
BS15976.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RB | 230..699 | 16..486 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:26:34 Download gff for
BS15976.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 449..918 | 16..486 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:26:34 Download gff for
BS15976.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15897282..15897423 | 16..157 | 100 | <- | Plus |
3R | 15897548..15897709 | 158..319 | 100 | <- | Plus |
3R | 15897775..15897940 | 320..486 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:53:13 Download gff for
BS15976.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11723004..11723145 | 16..157 | 100 | <- | Plus |
arm_3R | 11723270..11723431 | 158..319 | 100 | <- | Plus |
arm_3R | 11723497..11723662 | 320..486 | 98 | | Plus |
BS15976.5prime Sequence
492 bp (492 high quality bases) assembled on 2007-04-16
> BS15976.5prime
GAAGTTATCAGTCGACATGAACAGCGATGAGGTGCAACTGATCAAGAAGA
CCTGGGAAATCCCCGTGGCAACACCAACAGATTCTGGAGCGGCGATACTG
ACGCAGTTTTTCAACCGCTTTCCGTCCAACTTGGAGAAGTTCCCCTTCCG
CGATGTTCCTTTGGAGGAGCTAAGTGGAAATGCTCGCTTCCGAGCACATG
CCGGCAGAATCATAAGGGTCTTTGACGAGTCCATCCAGGTCCTGGGCCAG
GATGGCGATCTGGAGAAGCTGGACGAGATCTGGACCAAAATTGCCGTTAG
TCACATTCCGCGGACCGTTTCCAAGGAGTCTTACAACCAACTGAAAGGAG
TTATCCTGGATGTGCTGACAGCTGCCTGCAGTCTGGACGAGAGTCAAGCG
GCCACGTGGGCCAAGCTGGTGGACCATGTCTACGGAATCATCTTCAAGGC
GATCGACGACGACGGCAACGCCAAGTAGAAGCTTTCTAGACC
BS15976.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:16:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9734-PC | 462 | glob1-RC | 1..462 | 17..478 | 2310 | 100 | Plus |
CG9734-PB | 462 | glob1-RB | 1..462 | 17..478 | 2310 | 100 | Plus |
CG9734-PA | 462 | glob1-RA | 1..462 | 17..478 | 2310 | 100 | Plus |
CG9734-PD | 462 | glob1-RD | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 921 | CG9734-RF | 101..565 | 15..479 | 2325 | 100 | Plus |
glob1-RD | 1143 | CG9734-RD | 323..787 | 15..479 | 2325 | 100 | Plus |
glob1-RA | 1274 | CG9734-RA | 454..918 | 15..479 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:01:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15897548..15897709 | 337..176 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897774..15897935 | 176..15 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897282..15897423 | 479..338 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:01:08 has no hits.
BS15976.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:56 Download gff for
BS15976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9734-PD | 1..462 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 04:43:44 Download gff for
BS15976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RB | 230..699 | 9..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:32:52 Download gff for
BS15976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 449..918 | 9..479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:32:52 Download gff for
BS15976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15897282..15897423 | 338..479 | 100 | <- | Minus |
3R | 15897548..15897709 | 176..337 | 100 | <- | Minus |
3R | 15897775..15897940 | 9..175 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:43:44 Download gff for
BS15976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11723004..11723145 | 338..479 | 100 | <- | Minus |
arm_3R | 11723270..11723431 | 176..337 | 100 | <- | Minus |
arm_3R | 11723497..11723662 | 9..175 | 98 | | Minus |
BS15976.complete Sequence
494 bp assembled on 2007-05-07
GenBank Submission: FJ638006
> BS15976.complete
GAAGTTATCAGTCGACATGAACAGCGATGAGGTGCAACTGATCAAGAAGA
CCTGGGAAATCCCCGTGGCAACACCAACAGATTCTGGAGCGGCGATACTG
ACGCAGTTTTTCAACCGCTTTCCGTCCAACTTGGAGAAGTTCCCCTTCCG
CGATGTTCCTTTGGAGGAGCTAAGTGGAAATGCTCGCTTCCGAGCACATG
CCGGCAGAATCATAAGGGTCTTTGACGAGTCCATCCAGGTCCTGGGCCAG
GATGGCGATCTGGAGAAGCTGGACGAGATCTGGACCAAAATTGCCGTTAG
TCACATTCCGCGGACCGTTTCCAAGGAGTCTTACAACCAACTGAAAGGAG
TTATCCTGGATGTGCTGACAGCTGCCTGCAGTCTGGACGAGAGTCAAGCG
GCCACGTGGGCCAAGCTGGTGGACCATGTCTACGGAATCATCTTCAAGGC
GATCGACGACGACGGCAACGCCAAGTAGAAGCTTTCTAGACCAT
BS15976.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 462 | CG9734-PF | 1..462 | 17..478 | 2310 | 100 | Plus |
glob1-RD | 462 | CG9734-PD | 1..462 | 17..478 | 2310 | 100 | Plus |
glob1-RA | 462 | CG9734-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-RF | 921 | CG9734-RF | 101..565 | 15..479 | 2325 | 100 | Plus |
glob1-RD | 1143 | CG9734-RD | 323..787 | 15..479 | 2325 | 100 | Plus |
glob1-RA | 1274 | CG9734-RA | 454..918 | 15..479 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15897548..15897709 | 337..176 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897774..15897935 | 176..15 | 810 | 100 | Minus |
3R | 32079331 | 3R | 15897282..15897423 | 479..338 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:09:53 has no hits.
BS15976.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:00 Download gff for
BS15976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 1..462 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:58:37 Download gff for
BS15976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RD | 320..789 | 9..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:41 Download gff for
BS15976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RB | 237..698 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:01 Download gff for
BS15976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RD | 320..789 | 9..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:32 Download gff for
BS15976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glob1-RA | 456..917 | 17..478 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:32 Download gff for
BS15976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15897283..15897423 | 338..478 | 100 | <- | Minus |
3R | 15897548..15897709 | 176..337 | 100 | <- | Minus |
3R | 15897775..15897933 | 17..175 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:41 Download gff for
BS15976.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11723005..11723145 | 338..478 | 100 | <- | Minus |
arm_3R | 11723270..11723431 | 176..337 | 100 | <- | Minus |
arm_3R | 11723497..11723655 | 17..175 | 100 | | Minus |
BS15976.pep Sequence
Translation from 16 to 477
> BS15976.pep
MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDVPLE
ELSGNARFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRT
VSKESYNQLKGVILDVLTAACSLDESQAATWAKLVDHVYGIIFKAIDDDG
NAK*
BS15976.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glob1-PF | 153 | CG9734-PF | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PD | 153 | CG9734-PD | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PA | 153 | CG9734-PA | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PB | 153 | CG9734-PB | 1..153 | 1..153 | 786 | 100 | Plus |
glob1-PC | 153 | CG9734-PC | 1..153 | 1..153 | 786 | 100 | Plus |