Clone BS15979 Report

Search the DGRC for BS15979

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG14823-RA
Protein status:BS15979.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15979.3prime Sequence

822 bp (815 high quality bases) assembled on 2007-04-16

> BS15979.3prime
ATGGTCTAGAAAGCTTTTAAGTAATCCCCCTGTATTTCAAGCAGTTTTCC
AATCTCCTCTCAGACAGGCTCCCCAGTGGCTCCTGCCTGCGGCAGCCGCC
GGGTCCTCTCATGTGCAGCCTCACATGATCCCGACACTCGATCCGTCCGT
CTCCATTGCAATCCTCGCCACCATATCGCTGCACATAGCTACGCACAATA
CGCTCGGCGCACTGGACATCCACCACGCATCTTCCGTAGTCCCGGGCGAG
TGAGTCGTCCGGGTCAATTATCCGGAGTGCGTCCTGCCAGTAGACGTGGG
AGATGCGATAAATGCCGCACGGCTCCTCTGGTCGTCCTCGGTGCCTGCAG
ATTGCCGGAATATTATCCGTGGCAGTGGTGGCCATGCAGTCCAGGCACTT
GGCACTGGGCTCTGGGGAGGATGTCGGAGGCGGCTGGAATGTTGTTATCG
TCGAGGTCTGGGCATCCACTCCCGCAGCGGTGACCATGGGAAAGTCCTCC
TCCAGGACCTCCACTTGCCCCCGATCCTTGAGATTGATGTGCAGTCGGCC
CAGATGATGCTTCTGTCTTAAGTGCATGTAAATGGCGCCGATGATGAGCA
GAAGGGCGATGAAAATGGCGCCCGTACTCAGGACTTGGCGAGTGCAGCAG
GACCTTCGAGTCCATCGTTTCCGCTTACGACTTTCCCCGGACATTGACAG
CGCTTCGGCATATTCCTGATGCTCCACCACCTTGGACTCATCCGTTTCCA
CATCATCCTCACTGTATTTGGCCAATTCCGCCACACTGCTGCTGCATGTG
GGCTCCATGTCGACTGATAACT

BS15979.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-PA 792 CG14823-RA 1..792 808..17 3960 100 Minus
CG14823-PB 351 CG14823-RB 1..343 808..466 1715 100 Minus
CG14823-PC 351 CG14823-RC 1..343 808..466 1715 100 Minus
CG14823-PD 390 CG14823-RD 1..343 808..466 1715 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-RA 2098 CG14823-RA 66..864 813..15 3980 99.9 Minus
CG14823-RD 1108 CG14823-RD 655..1105 465..15 2255 100 Minus
CG14823-RB 974 CG14823-RB 521..971 465..15 2255 100 Minus
CG14823-RD 1108 CG14823-RD 66..413 813..466 1725 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7066379..7066726 813..466 1725 99.7 Minus
3L 28110227 3L 7068003..7068229 241..15 1135 100 Minus
3L 28110227 3L 7067554..7067779 466..241 1130 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:30:05 has no hits.

BS15979.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:58 Download gff for BS15979.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-PA 1..792 17..808 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 06:54:02 Download gff for BS15979.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 62..867 12..816 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:01:05 Download gff for BS15979.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 62..864 15..816 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:01:05 Download gff for BS15979.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 7066375..7066726 466..816 99 -> Minus
3L 7067555..7067779 241..465 100 -> Minus
3L 7068004..7068229 15..240 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 06:54:02 Download gff for BS15979.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7059475..7059826 466..816 99 -> Minus
arm_3L 7060655..7060879 241..465 100 -> Minus
arm_3L 7061104..7061329 15..240 100   Minus

BS15979.5prime Sequence

822 bp (763 high quality bases) assembled on 2007-04-16

> BS15979.5prime
GAAGTTATCAGTCGACATGGAGCCCACATGCAGCAGCAGTGTGGCGGAAT
TGGCCAAATACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTGGTG
GAGCATCAGGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCGTAA
GCGGAAACGATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGAGTA
CGGGCGCCATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTACATG
CACTTAAGACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAAGGA
TCGGGGGCAAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCGCTG
CGGGAGTGGATGCCCAGACCTCGACGATAACAACATTCCAGCCGCCTCCG
ACATCCTCCCCAGAGCCCAGTGCCAAGTGCCTGGACTGCATGGCCACCAC
TGCCACGGATAATATTCCGGCAATCTGCAGGCACCGAGGACGACCAGAGG
AGCCGTGCGGCATTTATCGCATCTCCCACGTCTACTGGCAGGACGCACTC
CGGATAATTGACCCGGACGACTCACTCGCCCGGGACTACGGAAGATGCGT
GGTGGATGTCCAGTGCGCCGAGCGTATTGTGCGTAGCTATGTGCAGCGAT
ATGGTGGCGAGGATTGCAATGGAGACGGACGGATCGAGTGTCGGGATCAT
GTGAGGCTGCACATGAGAGGACCCGGCGGCTGCCGCAGGCAGGAGCCACT
GGGGAGCCTGTCTGAGAGGAGATTGGAAAACTGCTTGAAATACANGGGGA
TTACTTAAAAGCTTTCTAGACC

BS15979.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-PA 792 CG14823-RA 1..792 17..808 3941 99.8 Plus
CG14823-PB 351 CG14823-RB 1..343 17..359 1715 100 Plus
CG14823-PC 351 CG14823-RC 1..343 17..359 1715 100 Plus
CG14823-PD 390 CG14823-RD 1..343 17..359 1715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-RA 2098 CG14823-RA 66..864 12..810 3969 99.7 Plus
CG14823-RD 1108 CG14823-RD 655..1105 360..810 2244 99.8 Plus
CG14823-RB 974 CG14823-RB 521..971 360..810 2244 99.8 Plus
CG14823-RD 1108 CG14823-RD 66..413 12..359 1725 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:02:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7066379..7066726 12..359 1725 99.7 Plus
3L 28110227 3L 7067554..7067779 359..584 1130 100 Plus
3L 28110227 3L 7068003..7068229 584..810 1124 99.6 Plus
Blast to na_te.dros performed on 2015-02-11 23:02:18 has no hits.

BS15979.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:00:58 Download gff for BS15979.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-PA 1..792 17..808 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 04:43:53 Download gff for BS15979.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 62..867 9..813 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:35:02 Download gff for BS15979.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 62..864 9..810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:35:02 Download gff for BS15979.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7066375..7066726 9..359 99 -> Plus
3L 7067555..7067779 360..584 100 -> Plus
3L 7068004..7068229 585..810 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:43:53 Download gff for BS15979.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7059475..7059826 9..359 99 -> Plus
arm_3L 7060655..7060879 360..584 100 -> Plus
arm_3L 7061104..7061329 585..810 99   Plus

BS15979.complete Sequence

824 bp assembled on 2007-05-07

GenBank Submission: FJ638008

> BS15979.complete
GAAGTTATCAGTCGACATGGAGCCCACATGCAGCAGCAGTGTGGCGGAAT
TGGCCAAATACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTGGTG
GAGCATCAGGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCGTAA
GCGGAAACGATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGAGTA
CGGGCGCCATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTACATG
CACTTAAGACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAAGGA
TCGGGGGCAAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCGCTG
CGGGAGTGGATGCCCAGACCTCGACGATAACAACATTCCAGCCGCCTCCG
ACATCCTCCCCAGAGCCCAGTGCCAAGTGCCTGGACTGCATGGCCACCAC
TGCCACGGATAATATTCCGGCAATCTGCAGGCACCGAGGACGACCAGAGG
AGCCGTGCGGCATTTATCGCATCTCCCACGTCTACTGGCAGGACGCACTC
CGGATAATTGACCCGGACGACTCACTCGCCCGGGACTACGGAAGATGCGT
GGTGGATGTCCAGTGCGCCGAGCGTATTGTGCGTAGCTATGTGCAGCGAT
ATGGTGGCGAGGATTGCAATGGAGACGGACGGATCGAGTGTCGGGATCAT
GTGAGGCTGCACATGAGAGGACCCGGCGGCTGCCGCAGGCAGGAGCCACT
GGGGAGCCTGTCTGAGAGGAGATTGGAAAACTGCTTGAAATACAGGGGGA
TTACTTAAAAGCTTTCTAGACCAT

BS15979.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-RA 792 CG14823-PA 1..792 17..808 3960 100 Plus
CG14823-RD 390 CG14823-PD 1..343 17..359 1715 100 Plus
CG14823-RB 351 CG14823-PB 1..343 17..359 1715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-RA 2098 CG14823-RA 66..864 12..810 3980 99.9 Plus
CG14823-RD 1108 CG14823-RD 655..1105 360..810 2255 100 Plus
CG14823-RB 974 CG14823-RB 521..971 360..810 2255 100 Plus
CG14823-RD 1108 CG14823-RD 66..413 12..359 1725 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:33:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7066379..7066726 12..359 1725 99.7 Plus
3L 28110227 3L 7068003..7068229 584..810 1135 100 Plus
3L 28110227 3L 7067554..7067779 359..584 1130 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:33:27 has no hits.

BS15979.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:48 Download gff for BS15979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 1..792 17..808 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:41 Download gff for BS15979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 62..870 9..815 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:31:44 Download gff for BS15979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 71..860 17..806 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:48 Download gff for BS15979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 62..870 9..815 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:11 Download gff for BS15979.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RA 71..860 17..806 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:11 Download gff for BS15979.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7066384..7066726 17..359 100 -> Plus
3L 7067555..7067779 360..584 100 -> Plus
3L 7068004..7068225 585..806 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:31:44 Download gff for BS15979.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7059484..7059826 17..359 100 -> Plus
arm_3L 7060655..7060879 360..584 100 -> Plus
arm_3L 7061104..7061325 585..806 100   Plus

BS15979.pep Sequence

Translation from 16 to 807

> BS15979.pep
MEPTCSSSVAELAKYSEDDVETDESKVVEHQEYAEALSMSGESRKRKRWT
RRSCCTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVE
VLEEDFPMVTAAGVDAQTSTITTFQPPPTSSPEPSAKCLDCMATTATDNI
PAICRHRGRPEEPCGIYRISHVYWQDALRIIDPDDSLARDYGRCVVDVQC
AERIVRSYVQRYGGEDCNGDGRIECRDHVRLHMRGPGGCRRQEPLGSLSE
RRLENCLKYRGIT*

BS15979.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-PA 263 CG14823-PA 1..263 1..263 1405 100 Plus
CG14823-PB 116 CG14823-PB 1..114 1..114 582 100 Plus
CG14823-PD 129 CG14823-PD 1..114 1..114 582 100 Plus
CG6435-PA 163 CG6435-PA 29..144 138..258 170 37.1 Plus
CG6429-PA 159 CG6429-PA 31..151 137..258 166 33.1 Plus