Clone BS15986 Report

Search the DGRC for BS15986

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptGlut4EF-RE
Protein status:BS15986.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15986.5prime Sequence

444 bp (444 high quality bases) assembled on 2007-04-16

> BS15986.5prime
GAAGTTATCAGTCGACATGAGTGGCGAACGCCGCAGAACCACCACACACA
GTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTCCCGGAAACGT
CCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAACATGCCGTGC
CGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCATGGCTCAATGG
CCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCTGGAGCTCC
GGTTCCCCGTCGCCGCCATTGAGTGACGACGGCCACGCCCACCACAGCCC
ACACAATATCATGTCGCCCCACGATGCGGACAACGCACGCACACGCACAG
CATCCGTGTCCACGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAG
CGCAAGAAAAAGGTGGGTGATTCGATCTAAAAGCTTTCTAGACC

BS15986.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:17:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG33975-PA 1566 CG33975-RA 1..396 17..412 1980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RE 2589 CG34360-RE 918..1335 13..430 2090 100 Plus
Glut4EF-RD 4787 CG34360-RD 1651..2060 13..422 2020 99.5 Plus
Glut4EF-RH 10796 CG34360-RH 1651..2050 13..412 2000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9943677..9943912 195..430 1180 100 Plus
3R 32079331 3R 9943481..9943587 88..194 535 100 Plus
3R 32079331 3R 9930471..9930545 13..87 375 100 Plus
Blast to na_te.dros performed on 2015-02-13 13:06:50 has no hits.

BS15986.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:02 Download gff for BS15986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33975-PA 1..396 17..412 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:53:18 Download gff for BS15986.5prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 914..1338 8..434 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:27:19 Download gff for BS15986.5prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 914..1338 8..434 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:27:19 Download gff for BS15986.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9943677..9943915 195..434 99   Plus
3R 9930467..9930545 8..87 97 -> Plus
3R 9943481..9943587 88..194 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:53:18 Download gff for BS15986.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5756189..5756267 8..87 97 -> Plus
arm_3R 5769203..5769309 88..194 100 -> Plus
arm_3R 5769399..5769637 195..434 99   Plus

BS15986.3prime Sequence

444 bp (444 high quality bases) assembled on 2007-04-16

> BS15986.3prime
ATGGTCTAGAAAGCTTTTAGATCGAATCACCCACCTTTTTCTTGCGCTCC
TCCTTGTAGTCGATGACAATGCCCTCGTCCGACGTGGACACGGATGCTGT
GCGTGTGCGTGCGTTGTCCGCATCGTGGGGCGACATGATATTGTGTGGGC
TGTGGTGGGCGTGGCCGTCGTCACTCAATGGCGGCGACGGGGAACCGGAG
CTCCAGGAAGCCGAAGAGCTGCTGCCGGGACTCGAGCACTTGTCGGCCAT
TGAGCCATGCGGACTCTGCAACTTCATCGATGACAGAATCTCGGCGGCAC
GGCATGTTTCCAGATAGTTGCCGTAGTCCTGGTGATCGCTGGGCGGACGT
TTCCGGGAATTGTGCTGCGCCGTCAGCTGCGATGGCACCTCAATACTGTG
TGTGGTGGTTCTGCGGCGTTCGCCACTCATGTCGACTGATAACT

BS15986.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:17:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG33975-PA 1566 CG33975-RA 1..396 430..35 1980 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RE 2589 CG34360-RE 918..1335 434..17 2090 100 Minus
Glut4EF-RD 4787 CG34360-RD 1651..2060 434..25 2020 99.5 Minus
Glut4EF-RH 10796 CG34360-RH 1651..2050 434..35 2000 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9943677..9943912 252..17 1180 100 Minus
3R 32079331 3R 9943481..9943587 359..253 535 100 Minus
3R 32079331 3R 9930471..9930545 434..360 375 100 Minus
Blast to na_te.dros performed on 2015-02-10 20:58:52 has no hits.

BS15986.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:01 Download gff for BS15986.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33975-PA 1..396 35..430 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 13:58:57 Download gff for BS15986.3prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 914..1338 13..439 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:38:51 Download gff for BS15986.3prime
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 914..1338 13..439 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:38:51 Download gff for BS15986.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9930467..9930545 360..439 97 -> Minus
3R 9943481..9943587 253..359 100 -> Minus
3R 9943677..9943915 13..252 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 13:58:57 Download gff for BS15986.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5756189..5756267 360..439 97 -> Minus
arm_3R 5769203..5769309 253..359 100 -> Minus
arm_3R 5769399..5769637 13..252 99   Minus

BS15986.complete Sequence

446 bp assembled on 2007-05-07

GenBank Submission: FJ638011

> BS15986.complete
GAAGTTATCAGTCGACATGAGTGGCGAACGCCGCAGAACCACCACACACA
GTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTCCCGGAAACGT
CCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAACATGCCGTGC
CGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCATGGCTCAATGG
CCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCTGGAGCTCC
GGTTCCCCGTCGCCGCCATTGAGTGACGACGGCCACGCCCACCACAGCCC
ACACAATATCATGTCGCCCCACGATGCGGACAACGCACGCACACGCACAG
CATCCGTGTCCACGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAG
CGCAAGAAAAAGGTGGGTGATTCGATCTAAAAGCTTTCTAGACCAT

BS15986.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RE 414 CG34360-PE 1..414 17..430 2070 100 Plus
Glut4EF-RD 1086 CG34360-PD 657..1066 13..422 2020 99.5 Plus
Glut4EF-RH 2226 CG34360-PH 657..1056 13..412 2000 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:13:16
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-RE 2589 CG34360-RE 918..1335 13..430 2090 100 Plus
Glut4EF-RD 4787 CG34360-RD 1651..2060 13..422 2020 99.5 Plus
Glut4EF-RH 10796 CG34360-RH 1651..2050 13..412 2000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:13:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9943677..9943912 195..430 1180 100 Plus
3R 32079331 3R 9943481..9943587 88..194 535 100 Plus
3R 32079331 3R 9930471..9930545 13..87 375 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:13:14 has no hits.

BS15986.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:53:22 Download gff for BS15986.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RE 1..414 17..430 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:41:35 Download gff for BS15986.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RE 922..1333 17..428 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:32 Download gff for BS15986.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 922..1333 17..428 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:53:22 Download gff for BS15986.complete
Subject Subject Range Query Range Percent Splice Strand
CG34360-RE 914..1338 8..434 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:06:25 Download gff for BS15986.complete
Subject Subject Range Query Range Percent Splice Strand
Glut4EF-RE 922..1333 17..428 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:06:25 Download gff for BS15986.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9930475..9930545 17..87 100 -> Plus
3R 9943481..9943587 88..194 100 -> Plus
3R 9943677..9943910 195..428 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:32 Download gff for BS15986.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5756197..5756267 17..87 100 -> Plus
arm_3R 5769203..5769309 88..194 100 -> Plus
arm_3R 5769399..5769632 195..428 100   Plus

BS15986.pep Sequence

Translation from 16 to 429

> BS15986.pep
MSGERRRTTTHSIEVPSQLTAQHNSRKRPPSDHQDYGNYLETCRAAEILS
SMKLQSPHGSMADKCSSPGSSSSASWSSGSPSPPLSDDGHAHHSPHNIMS
PHDADNARTRTASVSTSDEGIVIDYKEERKKKVGDSI*

BS15986.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:49:33
Subject Length Description Subject Range Query Range Score Percent Strand
Glut4EF-PE 137 CG34360-PE 1..137 1..137 723 100 Plus
Glut4EF-PD 361 CG34360-PD 221..355 1..135 704 98.5 Plus
Glut4EF-PF 521 CG34360-PF 1..132 1..132 699 100 Plus
Glut4EF-PB 521 CG34360-PB 1..132 1..132 699 100 Plus
Glut4EF-PH 741 CG34360-PH 221..352 1..132 699 100 Plus