Clone Sequence Records
BS15990.3prime Sequence
741 bp (741 high quality bases) assembled on 2007-04-16
> BS15990.3prime
ATGGTCTAGAAAGCTTTTAGGCCACCTTGTTTGATGGCGCGACAGCTTCC
TTGTTGGCGGCTGTTTTGTTTTTCTGACCCTGTCGCTTGGTTTTCGAGCC
CGTTCGCCGCTTGTGGCCGCTGCGCTTCGAAGGAGTCCGTTTCCGTTGGC
CACGACGGCCGCGCTTTCCCCTGCCGCCGCACCTGCGGTTTCCCCTCCTG
CGTTTACTGCTTCCACGCCCCTTGCGTCGGCCCTTACCGTTCCGCCTGCC
ACCGCGTCGGCGATTGCGTGGCTCAACGCGTGAGAGGTCGATTTCCTGCT
CCAGCTCCTCCTCGGCCTCGTCCTCGGGCTCCTCAAGGTCCTGCAGTTCA
TCGATGGACTCCTGCTCCTTCGCCAGCTTGTGCTTGACTTCAGTCTTCGG
CTTGGCGGGTGTGATGTTAGCGGTCACCTTTTTGGTATGCAGTTTTTTGT
TCTCCTTTTCGTCTTCCTCCTCCTCTCCATCCTTGATATCATCTCCCTCC
TCGTCCTCACTAGCGTCGGCCAGGTCCTCTTCGTGCTCCAGGATGTCATC
GCCATCCTCTTCGTCCTGCTGAATGGCATAGTATTTGGCATTCAAGCGCT
GGAGGCGCATCTGCTGCTCCAGAGCAGGTCTGGCCCGCGTGGCGGGCCAG
CTGGGCTGGGCCAGGGAACCTGTACCAATGCTGAGCAGCGCCACTAGGGC
TATGAAGAAGAGCCACTTCAATGACATGTCGACTGATAACT
BS15990.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:18:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14756-PA | 711 | CG14756-RA | 1..711 | 727..17 | 3555 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14756-RA | 819 | CG14756-RA | 23..734 | 728..17 | 3560 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8204973..8205684 | 17..728 | 3560 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:03:16 has no hits.
BS15990.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:04 Download gff for
BS15990.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-PA | 1..711 | 17..727 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 04:43:59 Download gff for
BS15990.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 19..737 | 13..735 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:36:51 Download gff for
BS15990.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 19..737 | 13..735 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:36:51 Download gff for
BS15990.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8204970..8205688 | 13..735 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:43:59 Download gff for
BS15990.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4092475..4093193 | 13..735 | 99 | | Plus |
BS15990.5prime Sequence
741 bp (725 high quality bases) assembled on 2007-04-16
> BS15990.5prime
GAAGTTATCAGTCGACATGTCATTGAAGTGGCTCTTCTTCATAGCCCTAG
TGGCGCTGCTCAGCATTGGTACAGGTTCCCTGGCCCAGCCCAGCTGGCCC
GCCACGCGGGCCAGACCTGCTCTGGAGCAGCAGATGCGCCTCCAGCGCTT
GAATGCCAAATACTATGCCATTCAGCAGGACGAAGAGGATGGCGATGACA
TCCTGGAGCACGAAGAGGACCTGGCCGACGCTAGTGAGGACGAGGAGGGA
GATGATATCAAGGATGGAGAGGAGGAGGAAGACGAAAAGGAGAACAAAAA
ACTGCATACCAAAAAGGTGACCGCTAACATCACACCCGCCAAGCCGAAGA
CTGAAGTCAAGCACAAGCTGGCGAAGGAGCAGGAGTCCATCGATGAACTG
CAGGACCTTGAGGAGCCCGAGGACGAGGCCGAGGAGGAGCTGGAGCAGGA
AATCGACCTCTCACGCGTTGAGCCACGCAATCGCCGACGCGGTGGCAGGC
GGAACGGTAAGGGCCGACGCAAGGGGCGTGGAAGCAGTAAACGCAGGAGG
GGAAACCGCAGGTGCGGCGGCAGGGGAAAGCGCGGCCGTCGTGGCCAACG
GAAACGGACTCCTTCGAAGCGCAGCGGCCACAAGCGGCGAACGGGCTCGA
AAACCAAGCGACAGGGTCAGAAAAACAAAACAGCCGCCAACAAGGAAGCT
GTCGCGCCATCAAACAAGGTGGCCTAAAAGCTTTCTAGACC
BS15990.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14756-PA | 711 | CG14756-RA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14756-RA | 819 | CG14756-RA | 23..734 | 16..727 | 3560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8204973..8205684 | 727..16 | 3560 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:24:48 has no hits.
BS15990.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:05 Download gff for
BS15990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-PA | 1..711 | 17..727 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:48:53 Download gff for
BS15990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 19..737 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:32:04 Download gff for
BS15990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 19..737 | 9..731 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:32:04 Download gff for
BS15990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8204970..8205688 | 9..731 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:48:53 Download gff for
BS15990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4092475..4093193 | 9..731 | 99 | | Minus |
BS15990.complete Sequence
743 bp assembled on 2007-05-07
GenBank Submission: FJ638013
> BS15990.complete
GAAGTTATCAGTCGACATGTCATTGAAGTGGCTCTTCTTCATAGCCCTAG
TGGCGCTGCTCAGCATTGGTACAGGTTCCCTGGCCCAGCCCAGCTGGCCC
GCCACGCGGGCCAGACCTGCTCTGGAGCAGCAGATGCGCCTCCAGCGCTT
GAATGCCAAATACTATGCCATTCAGCAGGACGAAGAGGATGGCGATGACA
TCCTGGAGCACGAAGAGGACCTGGCCGACGCTAGTGAGGACGAGGAGGGA
GATGATATCAAGGATGGAGAGGAGGAGGAAGACGAAAAGGAGAACAAAAA
ACTGCATACCAAAAAGGTGACCGCTAACATCACACCCGCCAAGCCGAAGA
CTGAAGTCAAGCACAAGCTGGCGAAGGAGCAGGAGTCCATCGATGAACTG
CAGGACCTTGAGGAGCCCGAGGACGAGGCCGAGGAGGAGCTGGAGCAGGA
AATCGACCTCTCACGCGTTGAGCCACGCAATCGCCGACGCGGTGGCAGGC
GGAACGGTAAGGGCCGACGCAAGGGGCGTGGAAGCAGTAAACGCAGGAGG
GGAAACCGCAGGTGCGGCGGCAGGGGAAAGCGCGGCCGTCGTGGCCAACG
GAAACGGACTCCTTCGAAGCGCAGCGGCCACAAGCGGCGAACGGGCTCGA
AAACCAAGCGACAGGGTCAGAAAAACAAAACAGCCGCCAACAAGGAAGCT
GTCGCGCCATCAAACAAGGTGGCCTAAAAGCTTTCTAGACCAT
BS15990.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14756-RA | 711 | CG14756-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14756-RA | 819 | CG14756-RA | 23..734 | 16..727 | 3560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:56:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8204973..8205684 | 727..16 | 3560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 23:56:22 has no hits.
BS15990.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:27 Download gff for
BS15990.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 1..711 | 17..727 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:29:13 Download gff for
BS15990.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 19..737 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:41:56 Download gff for
BS15990.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 24..732 | 17..725 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:27 Download gff for
BS15990.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 19..737 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:11:17 Download gff for
BS15990.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14756-RA | 24..732 | 17..725 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:11:17 Download gff for
BS15990.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8204975..8205683 | 17..725 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:41:56 Download gff for
BS15990.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4092480..4093188 | 17..725 | 100 | | Minus |
BS15990.pep Sequence
Translation from 16 to 726
> BS15990.pep
MSLKWLFFIALVALLSIGTGSLAQPSWPATRARPALEQQMRLQRLNAKYY
AIQQDEEDGDDILEHEEDLADASEDEEGDDIKDGEEEEDEKENKKLHTKK
VTANITPAKPKTEVKHKLAKEQESIDELQDLEEPEDEAEEELEQEIDLSR
VEPRNRRRGGRRNGKGRRKGRGSSKRRRGNRRCGGRGKRGRRGQRKRTPS
KRSGHKRRTGSKTKRQGQKNKTAANKEAVAPSNKVA*
BS15990.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:45:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14756-PA | 236 | CG14756-PA | 1..236 | 1..236 | 1213 | 100 | Plus |
