Clone BS15992 Report

Search the DGRC for BS15992

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:159
Well:92
Vector:pDNR-Dual
Associated Gene/Transcriptsosie-RA
Protein status:BS15992.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15992.3prime Sequence

591 bp (591 high quality bases) assembled on 2007-04-16

> BS15992.3prime
ATGGTCTAGAAAGCTTCTAGAAATGCTTTCGCATGTGGGCGGATACCAAA
AAGGGCGCCAGAAGTGAGCAGATCGAGACCAAGAAGCTGACCAGGCCCTG
AAGATTAGCTCCACTGCAGATGTCGTGCAGGATGTCCTCCACATATCCGT
TGTCGTTGTCGCAGAGACACAGCTTGGTCTTGCTGGACATGAACTTGGCC
ACTCCGATGGTGCGGTTGCTGTTCTCGTACTGGCACACCATTCCATCCTC
GCAGTCGTTGTTGCTGTTGCACTTGTGACGCAGGCCTTTCAGGACATCTG
GACAGCTGCCAGCCGAAGGAGGCGAGTCGTCGCCGCATAGGCAACGCAGC
TTGTAGTCATTGGGATCCTTGACGCAGCTGGTGCGATCTATCGCCGTGCA
ATCATCGTGGGCACTGCACTCTCGTCCTTTAACAATTGGGACGTGCGTGG
GAGGCGGCTGATTGTTGGTCTTGCCAAAAGTGGTCAGAGCCGTGGAGCTG
ACCCCGAAGAGGATGATGAAGATGCCGAAGAGCATGGTCAGACTGCCGCA
TTGTGTGAAGCGCTTCAGGGGCTGCATGTCGACTGATAACT

BS15992.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13636-PA 561 CG13636-RA 1..561 577..17 2805 100 Minus
CG13636-PB 225 CG13636-RB 1..225 241..17 1125 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:02:34
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 1738 CG13636-RA 393..956 577..14 2820 100 Minus
sosie-RC 635 CG13636-RC 86..505 433..14 2100 100 Minus
sosie-RB 1528 CG13636-RB 328..746 432..14 2095 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24839311..24839489 287..109 895 100 Minus
3R 32079331 3R 24838050..24838198 433..285 745 100 Minus
3R 32079331 3R 24837073..24837221 577..429 730 99.3 Minus
3R 32079331 3R 24839610..24839706 110..14 485 100 Minus
Blast to na_te.dros performed on 2015-02-12 05:02:31 has no hits.

BS15992.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:05 Download gff for BS15992.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13636-PA 1..561 17..577 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:19:51 Download gff for BS15992.3prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..962 9..577 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:24 Download gff for BS15992.3prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..962 9..577 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:24 Download gff for BS15992.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24837073..24837217 433..577 100 -> Minus
3R 24838051..24838197 286..432 100 -> Minus
3R 24839313..24839489 109..285 100 -> Minus
3R 24839612..24839712 9..108 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:19:51 Download gff for BS15992.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20662795..20662939 433..577 100 -> Minus
arm_3R 20663773..20663919 286..432 100 -> Minus
arm_3R 20665035..20665211 109..285 100 -> Minus
arm_3R 20665334..20665434 9..108 97   Minus

BS15992.5prime Sequence

591 bp (591 high quality bases) assembled on 2007-04-16

> BS15992.5prime
GAAGTTATCAGTCGACATGCAGCCCCTGAAGCGCTTCACACAATGCGGCA
GTCTGACCATGCTCTTCGGCATCTTCATCATCCTCTTCGGGGTCAGCTCC
ACGGCTCTGACCACTTTTGGCAAGACCAACAATCAGCCGCCTCCCACGCA
CGTCCCAATTGTTAAAGGACGAGAGTGCAGTGCCCACGATGATTGCACGG
CGATAGATCGCACCAGCTGCGTCAAGGATCCCAATGACTACAAGCTGCGT
TGCCTATGCGGCGACGACTCGCCTCCTTCGGCTGGCAGCTGTCCAGATGT
CCTGAAAGGCCTGCGTCACAAGTGCAACAGCAACAACGACTGCGAGGATG
GAATGGTGTGCCAGTACGAGAACAGCAACCGCACCATCGGAGTGGCCAAG
TTCATGTCCAGCAAGACCAAGCTGTGTCTCTGCGACAACGACAACGGATA
TGTGGAGGACATCCTGCACGACATCTGCAGTGGAGCTAATCTTCAGGGCC
TGGTCAGCTTCTTGGTCTCGATCTGCTCACTTCTGGCGCCCTTTTTGGTA
TCCGCCCACATGCGAAAGCATTTCTAGAAGCTTTCTAGACC

BS15992.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG13636-PA 561 CG13636-RA 1..561 17..577 2805 100 Plus
CG13636-PB 225 CG13636-RB 1..225 353..577 1125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:04:19
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 1738 CG13636-RA 393..956 17..580 2820 100 Plus
sosie-RC 635 CG13636-RC 86..505 161..580 2100 100 Plus
sosie-RB 1528 CG13636-RB 328..746 162..580 2095 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24839311..24839489 307..485 895 100 Plus
3R 32079331 3R 24838050..24838198 161..309 745 100 Plus
3R 32079331 3R 24837073..24837221 17..165 730 99.3 Plus
3R 32079331 3R 24839610..24839706 484..580 485 100 Plus
Blast to na_te.dros performed on 2015-02-11 23:04:15 has no hits.

BS15992.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:06 Download gff for BS15992.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13636-PA 1..561 17..577 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 04:44:01 Download gff for BS15992.5prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..962 17..585 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:25:23 Download gff for BS15992.5prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..962 17..585 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:25:23 Download gff for BS15992.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24837073..24837217 17..161 100 -> Plus
3R 24838051..24838197 162..308 100 -> Plus
3R 24839313..24839489 309..485 100 -> Plus
3R 24839612..24839712 486..585 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 04:44:01 Download gff for BS15992.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20662795..20662939 17..161 100 -> Plus
arm_3R 20663773..20663919 162..308 100 -> Plus
arm_3R 20665035..20665211 309..485 100 -> Plus
arm_3R 20665334..20665434 486..585 97   Plus

BS15992.complete Sequence

593 bp assembled on 2007-05-07

GenBank Submission: FJ638015

> BS15992.complete
GAAGTTATCAGTCGACATGCAGCCCCTGAAGCGCTTCACACAATGCGGCA
GTCTGACCATGCTCTTCGGCATCTTCATCATCCTCTTCGGGGTCAGCTCC
ACGGCTCTGACCACTTTTGGCAAGACCAACAATCAGCCGCCTCCCACGCA
CGTCCCAATTGTTAAAGGACGAGAGTGCAGTGCCCACGATGATTGCACGG
CGATAGATCGCACCAGCTGCGTCAAGGATCCCAATGACTACAAGCTGCGT
TGCCTATGCGGCGACGACTCGCCTCCTTCGGCTGGCAGCTGTCCAGATGT
CCTGAAAGGCCTGCGTCACAAGTGCAACAGCAACAACGACTGCGAGGATG
GAATGGTGTGCCAGTACGAGAACAGCAACCGCACCATCGGAGTGGCCAAG
TTCATGTCCAGCAAGACCAAGCTGTGTCTCTGCGACAACGACAACGGATA
TGTGGAGGACATCCTGCACGACATCTGCAGTGGAGCTAATCTTCAGGGCC
TGGTCAGCTTCTTGGTCTCGATCTGCTCACTTCTGGCGCCCTTTTTGGTA
TCCGCCCACATGCGAAAGCATTTCTAGAAGCTTTCTAGACCAT

BS15992.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 561 CG13636-PA 1..561 17..577 2805 100 Plus
sosie-RC 225 CG13636-PC 1..225 353..577 1125 100 Plus
sosie-RB 225 CG13636-PB 1..225 353..577 1125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 1738 CG13636-RA 393..956 17..580 2820 100 Plus
sosie-RC 635 CG13636-RC 86..505 161..580 2100 100 Plus
sosie-RB 1528 CG13636-RB 328..746 162..580 2095 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24839311..24839489 307..485 895 100 Plus
3R 32079331 3R 24838050..24838198 161..309 745 100 Plus
3R 32079331 3R 24837073..24837221 17..165 730 99.3 Plus
3R 32079331 3R 24839610..24839706 484..580 485 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:43:30 has no hits.

BS15992.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:40:47 Download gff for BS15992.complete
Subject Subject Range Query Range Percent Splice Strand
CG13636-RA 1..561 17..577 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:27:01 Download gff for BS15992.complete
Subject Subject Range Query Range Percent Splice Strand
CG13636-RA 394..963 17..585 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:36:23 Download gff for BS15992.complete
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..953 17..577 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:40:47 Download gff for BS15992.complete
Subject Subject Range Query Range Percent Splice Strand
CG13636-RA 394..963 17..585 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:55 Download gff for BS15992.complete
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..953 17..577 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:55 Download gff for BS15992.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24837073..24837217 17..161 100 -> Plus
3R 24838051..24838197 162..308 100 -> Plus
3R 24839313..24839489 309..485 100 -> Plus
3R 24839612..24839703 486..577 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:36:23 Download gff for BS15992.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20665334..20665425 486..577 100   Plus
arm_3R 20662795..20662939 17..161 100 -> Plus
arm_3R 20663773..20663919 162..308 100 -> Plus
arm_3R 20665035..20665211 309..485 100 -> Plus

BS15992.pep Sequence

Translation from 16 to 576

> BS15992.pep
MQPLKRFTQCGSLTMLFGIFIILFGVSSTALTTFGKTNNQPPPTHVPIVK
GRECSAHDDCTAIDRTSCVKDPNDYKLRCLCGDDSPPSAGSCPDVLKGLR
HKCNSNNDCEDGMVCQYENSNRTIGVAKFMSSKTKLCLCDNDNGYVEDIL
HDICSGANLQGLVSFLVSICSLLAPFLVSAHMRKHF*

BS15992.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:45:12
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-PA 186 CG13636-PA 1..186 1..186 1014 100 Plus
sosie-PC 74 CG13636-PC 1..74 113..186 391 100 Plus
sosie-PB 74 CG13636-PB 1..74 113..186 391 100 Plus