Clone BS16010 Report

Search the DGRC for BS16010

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:160
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG31775-RA
Protein status:BS16010.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16010.3prime Sequence

300 bp (300 high quality bases) assembled on 2007-04-16

> BS16010.3prime
ATGGTCTAGAAAGCTTTTACCAGCCTTGTTGCTGTTGCTGCTGCTGATCA
CCGAATCCACCTCCGAATCCACCTCCAAATCCCCCTTGCTGCTGCTGCTG
CTGATCACCGAATCCACCTCCGAATCCACCGCCAAATCCTCCTTGCTGCT
GCTGCTGATCACCAAATCCACCTCCAAATCCTCCTTGCTGCTGCTGCTGC
TGATCACCGAATCCACCGCCGAATCCAAACTGAGGTAGGGCAGCGGCCGC
GGCGAATAGGGCAATGAAGAGGATCAAAAACTTCATGTCGACTGATAACT

BS16010.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31775-PA 270 CG31775-RA 1..270 286..17 1325 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:56:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG31775-RB 371 CG31775-RB 39..311 287..15 1350 99.6 Minus
CG31775-RA 613 CG31775-RA 39..311 287..15 1350 99.6 Minus
CG42586-RB 613 CG42586-RB 39..311 287..15 1350 99.6 Minus
CG31775-RB 371 CG31775-RB 145..297 226..86 415 85.6 Minus
CG31775-RA 613 CG31775-RA 145..297 226..86 415 85.6 Minus
CG31775-RB 371 CG31775-RB 100..240 181..29 400 85 Minus
CG31775-RA 613 CG31775-RA 100..240 181..29 400 85 Minus
CG31775-RB 371 CG31775-RB 198..260 227..165 300 98.4 Minus
CG31775-RA 613 CG31775-RA 198..260 227..165 300 98.4 Minus
CG31775-RB 371 CG31775-RB 99..161 128..66 285 96.8 Minus
CG31775-RA 613 CG31775-RA 99..161 128..66 285 96.8 Minus
CG31775-RB 371 CG31775-RB 99..141 71..29 185 95.3 Minus
CG31775-RB 371 CG31775-RB 255..297 227..185 185 95.3 Minus
CG31775-RA 613 CG31775-RA 99..141 71..29 185 95.3 Minus
CG31775-RA 613 CG31775-RA 255..297 227..185 185 95.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:56:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14737392..14737652 15..275 1290 99.6 Plus
2L 23513712 2L 14741463..14741723 15..275 1290 99.6 Plus
2L 23513712 2L 14737406..14737558 86..226 365 85.6 Plus
2L 23513712 2L 14741477..14741629 86..226 365 85.6 Plus
2L 23513712 2L 14737463..14737603 29..181 350 85 Plus
2L 23513712 2L 14741534..14741674 29..181 350 85 Plus
2L 23513712 2L 14737443..14737505 165..227 300 98.4 Plus
2L 23513712 2L 14741514..14741576 165..227 300 98.4 Plus
2L 23513712 2L 14737542..14737604 66..128 285 96.8 Plus
2L 23513712 2L 14741613..14741675 66..128 285 96.8 Plus
2L 23513712 2L 14737406..14737448 185..227 185 95.3 Plus
2L 23513712 2L 14737562..14737604 29..71 185 95.3 Plus
2L 23513712 2L 14741477..14741519 185..227 185 95.3 Plus
2L 23513712 2L 14741633..14741675 29..71 185 95.3 Plus
Blast to na_te.dros performed 2015-02-13 07:56:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6830 48..25 111 95.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2347..2429 105..26 110 62.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2374..2396 48..26 106 95.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6754 48..26 106 95.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6775 48..26 106 95.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6774..6796 48..26 106 95.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2453..2489 50..15 101 78.4 Minus

BS16010.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:12 Download gff for BS16010.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31775-PA 1..270 17..286 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:49:14 Download gff for BS16010.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42586-RB 28..311 15..300 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:05:11 Download gff for BS16010.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42586-RB 28..311 15..300 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:05:11 Download gff for BS16010.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 14737392..14737651 15..274 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:49:14 Download gff for BS16010.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14737392..14737651 15..274 99 <- Plus

BS16010.5prime Sequence

300 bp (300 high quality bases) assembled on 2007-04-16

> BS16010.5prime
GAAGTTATCAGTCGACATGAAGTTTTTGATCCTCTTCATTGCCCTATTCG
CCGCGGCCGCTGCCCTACCTCAGTTTGGATTCGGCGGTGGATTCGGTGAT
CAGCAGCAGCAGCAGCAAGGAGGATTTGGAGGTGGATTTGGTGATCAGCA
GCAGCAGCAAGGAGGATTTGGCGGTGGATTCGGAGGTGGATTCGGTGATC
AGCAGCAGCAGCAGCAAGGGGGATTTGGAGGTGGATTCGGAGGTGGATTC
GGTGATCAGCAGCAGCAACAGCAACAAGGCTGGTAAAAGCTTTCTAGACC

BS16010.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:21:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG31775-PA 270 CG31775-RA 1..270 17..286 1325 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:09:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG31775-RB 371 CG31775-RB 39..311 16..288 1350 99.6 Plus
CG31775-RA 613 CG31775-RA 39..311 16..288 1350 99.6 Plus
CG42586-RB 613 CG42586-RB 39..311 16..288 1350 99.6 Plus
CG31775-RB 371 CG31775-RB 145..297 77..217 415 85.6 Plus
CG31775-RA 613 CG31775-RA 145..297 77..217 415 85.6 Plus
CG31775-RB 371 CG31775-RB 100..240 122..274 400 85 Plus
CG31775-RA 613 CG31775-RA 100..240 122..274 400 85 Plus
CG31775-RB 371 CG31775-RB 198..260 76..138 300 98.4 Plus
CG31775-RA 613 CG31775-RA 198..260 76..138 300 98.4 Plus
CG31775-RB 371 CG31775-RB 99..161 175..237 285 96.8 Plus
CG31775-RA 613 CG31775-RA 99..161 175..237 285 96.8 Plus
CG31775-RB 371 CG31775-RB 99..141 232..274 185 95.3 Plus
CG31775-RB 371 CG31775-RB 255..297 76..118 185 95.3 Plus
CG31775-RA 613 CG31775-RA 99..141 232..274 185 95.3 Plus
CG31775-RA 613 CG31775-RA 255..297 76..118 185 95.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14737392..14737652 288..28 1290 99.6 Minus
2L 23513712 2L 14741463..14741723 288..28 1290 99.6 Minus
2L 23513712 2L 14737406..14737558 217..77 365 85.6 Minus
2L 23513712 2L 14741477..14741629 217..77 365 85.6 Minus
2L 23513712 2L 14737463..14737603 274..122 350 85 Minus
2L 23513712 2L 14741534..14741674 274..122 350 85 Minus
2L 23513712 2L 14737443..14737505 138..76 300 98.4 Minus
2L 23513712 2L 14741514..14741576 138..76 300 98.4 Minus
2L 23513712 2L 14737542..14737604 237..175 285 96.8 Minus
2L 23513712 2L 14741613..14741675 237..175 285 96.8 Minus
2L 23513712 2L 14737406..14737448 118..76 185 95.3 Minus
2L 23513712 2L 14737562..14737604 274..232 185 95.3 Minus
2L 23513712 2L 14741477..14741519 118..76 185 95.3 Minus
2L 23513712 2L 14741633..14741675 274..232 185 95.3 Minus
Blast to na_te.dros performed 2015-02-11 19:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6830 255..278 111 95.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2347..2429 198..277 110 62.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2374..2396 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6754 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6775 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6774..6796 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2453..2489 253..288 101 78.4 Plus

BS16010.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:12 Download gff for BS16010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31775-PA 1..270 17..286 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 05:11:41 Download gff for BS16010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42586-RB 26..311 1..288 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:05:31 Download gff for BS16010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42586-RB 26..311 1..288 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:05:31 Download gff for BS16010.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 14737392..14737651 29..288 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 05:11:41 Download gff for BS16010.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14737392..14737651 29..288 99 <- Minus

BS16010.complete Sequence

302 bp assembled on 2007-05-07

GenBank Submission: FJ638021

> BS16010.complete
GAAGTTATCAGTCGACATGAAGTTTTTGATCCTCTTCATTGCCCTATTCG
CCGCGGCCGCTGCCCTACCTCAGTTTGGATTCGGCGGTGGATTCGGTGAT
CAGCAGCAGCAGCAGCAAGGAGGATTTGGAGGTGGATTTGGTGATCAGCA
GCAGCAGCAAGGAGGATTTGGCGGTGGATTCGGAGGTGGATTCGGTGATC
AGCAGCAGCAGCAGCAAGGGGGATTTGGAGGTGGATTCGGAGGTGGATTC
GGTGATCAGCAGCAGCAACAGCAACAAGGCTGGTAAAAGCTTTCTAGACC
AT

BS16010.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG31775-RB 270 CG31775-PB 1..270 17..286 1335 99.6 Plus
CG31775-RA 270 CG31775-PA 1..270 17..286 1335 99.6 Plus
CG42586-RB 270 CG42586-PB 1..270 17..286 1335 99.6 Plus
CG31775-RB 270 CG31775-PB 106..258 77..217 365 85.6 Plus
CG31775-RA 270 CG31775-PA 106..258 77..217 365 85.6 Plus
CG31775-RB 270 CG31775-PB 61..201 122..274 350 85 Plus
CG31775-RA 270 CG31775-PA 61..201 122..274 350 85 Plus
CG31775-RB 270 CG31775-PB 159..221 76..138 300 98.4 Plus
CG31775-RA 270 CG31775-PA 159..221 76..138 300 98.4 Plus
CG31775-RB 270 CG31775-PB 60..122 175..237 285 96.8 Plus
CG31775-RA 270 CG31775-PA 60..122 175..237 285 96.8 Plus
CG31775-RB 270 CG31775-PB 60..102 232..274 185 95.3 Plus
CG31775-RB 270 CG31775-PB 216..258 76..118 185 95.3 Plus
CG31775-RA 270 CG31775-PA 60..102 232..274 185 95.3 Plus
CG31775-RA 270 CG31775-PA 216..258 76..118 185 95.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG31775-RB 371 CG31775-RB 39..311 16..288 1350 99.6 Plus
CG31775-RA 613 CG31775-RA 39..311 16..288 1350 99.6 Plus
CG42586-RB 613 CG42586-RB 39..311 16..288 1350 99.6 Plus
CG31775-RB 371 CG31775-RB 145..297 77..217 365 85.6 Plus
CG31775-RA 613 CG31775-RA 145..297 77..217 365 85.6 Plus
CG31775-RB 371 CG31775-RB 100..240 122..274 350 85 Plus
CG31775-RA 613 CG31775-RA 100..240 122..274 350 85 Plus
CG31775-RB 371 CG31775-RB 198..260 76..138 300 98.4 Plus
CG31775-RA 613 CG31775-RA 198..260 76..138 300 98.4 Plus
CG31775-RB 371 CG31775-RB 99..161 175..237 285 96.8 Plus
CG31775-RA 613 CG31775-RA 99..161 175..237 285 96.8 Plus
CG31775-RB 371 CG31775-RB 99..141 232..274 185 95.3 Plus
CG31775-RB 371 CG31775-RB 255..297 76..118 185 95.3 Plus
CG31775-RA 613 CG31775-RA 255..297 76..118 185 95.3 Plus
CG31775-RA 613 CG31775-RA 99..141 232..274 185 95.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14737392..14737652 288..28 1290 99.6 Minus
2L 23513712 2L 14741463..14741723 288..28 1290 99.6 Minus
2L 23513712 2L 14741477..14741629 217..77 365 85.6 Minus
2L 23513712 2L 14737406..14737558 217..77 365 85.6 Minus
2L 23513712 2L 14741534..14741674 274..122 350 85 Minus
2L 23513712 2L 14737463..14737603 274..122 350 85 Minus
2L 23513712 2L 14737443..14737505 138..76 300 98.4 Minus
2L 23513712 2L 14741514..14741576 138..76 300 98.4 Minus
2L 23513712 2L 14737542..14737604 237..175 285 96.8 Minus
2L 23513712 2L 14741613..14741675 237..175 285 96.8 Minus
2L 23513712 2L 14737406..14737448 118..76 185 95.3 Minus
2L 23513712 2L 14737562..14737604 274..232 185 95.3 Minus
2L 23513712 2L 14741477..14741519 118..76 185 95.3 Minus
2L 23513712 2L 14741633..14741675 274..232 185 95.3 Minus
Blast to na_te.dros performed 2014-11-27 13:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6830 255..278 111 95.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2347..2429 198..277 110 62.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2374..2396 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6754 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6775 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6774..6796 255..277 106 95.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2453..2489 253..288 101 78.4 Plus

BS16010.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-22 00:45:58 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:33:24 Download gff for BS16010.complete
Subject Subject Range Query Range Percent Splice Strand
CG31775-RA 23..308 1..288 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:45 Download gff for BS16010.complete
Subject Subject Range Query Range Percent Splice Strand
CG42586-RB 40..307 17..284 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-22 00:45:58 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:48 Download gff for BS16010.complete
Subject Subject Range Query Range Percent Splice Strand
CG42586-RB 40..307 17..284 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:48 Download gff for BS16010.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14737396..14737658 22..284 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:45 Download gff for BS16010.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14737396..14737658 22..284 98   Minus

BS16010.pep Sequence

Translation from 16 to 285

> BS16010.pep
MKFLILFIALFAAAAALPQFGFGGGFGDQQQQQQGGFGGGFGDQQQQQGG
FGGGFGGGFGDQQQQQQGGFGGGFGGGFGDQQQQQQQGW*

BS16010.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG31775-PB 89 CG31775-PB 1..89 1..89 489 100 Plus
CG31775-PA 89 CG31775-PA 1..89 1..89 489 100 Plus
CG42586-PB 89 CG42586-PB 1..89 1..89 489 100 Plus
CG42586-PA 89 CG42586-PA 1..89 1..89 489 100 Plus
CG15282-PB 79 CG15282-PB 1..76 1..88 225 63.7 Plus