Clone Sequence Records
BS16029.3prime Sequence
186 bp (186 high quality bases) assembled on 2007-04-16
> BS16029.3prime
ATGGTCTAGAAAGCTTTCATTGCTCCAGCTCGTTGGTGGGTCCGTGGGTC
AGCTTGGCTCTCATGGAGCCGCAGACCATCATGCAGGCGAACAGGGACAG
CTCCAGGACACGGCACATGCAGTAGGCCACCACATCCACCAGGTGCTCCA
CCACTCCCAAGTACAGACACATGTCGACTGATAACT
BS16029.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:24:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15704-PA | 156 | CG15704-RA | 1..156 | 172..17 | 780 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:06:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15704-RA | 456 | CG15704-RA | 179..334 | 172..17 | 780 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:06:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16280193..16280348 | 172..17 | 780 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:06:57 has no hits.
BS16029.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:24 Download gff for
BS16029.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-PA | 1..156 | 17..172 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:53:20 Download gff for
BS16029.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 170..334 | 17..180 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:27:41 Download gff for
BS16029.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 170..334 | 17..180 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:27:41 Download gff for
BS16029.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16280184..16280348 | 17..180 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:53:20 Download gff for
BS16029.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12167689..12167853 | 17..180 | 97 | | Minus |
BS16029.5prime Sequence
186 bp (186 high quality bases) assembled on 2007-04-16
> BS16029.5prime
GAAGTTATCCCTCGACATGTGTCTGTACTTGGGAGTGGTGGAGCACCTGG
TGGATGTGGTGGCCTACTGCATGTGCCGTGTCCTGGAGCTGTCCCTGTTC
GCCTGCATGATGGTCTGCGGCTCCATGAGAGCCAAGCTGACCCACGGACC
CACCAACGAGCTGGAGCAATGAAAGCTTTCTAGACC
BS16029.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15704-PA | 156 | CG15704-RA | 1..156 | 17..172 | 780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:04:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15704-RA | 456 | CG15704-RA | 179..334 | 17..172 | 780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:04:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16280193..16280348 | 17..172 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:04:05 has no hits.
BS16029.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:24 Download gff for
BS16029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-PA | 1..156 | 17..172 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:20:01 Download gff for
BS16029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 173..334 | 10..172 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:40 Download gff for
BS16029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 173..334 | 10..172 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:40 Download gff for
BS16029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16280187..16280348 | 10..172 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:20:01 Download gff for
BS16029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12167692..12167853 | 10..172 | 98 | | Plus |
BS16029.complete Sequence
188 bp assembled on 2010-02-09
GenBank Submission: KX801313
> BS16029.complete
GAAGTTATCAGTCGACATGTGTCTGTACTTGGGAGTGGTGGAGCACCTGG
TGGATGTGGTGGCCTACTGCATGTGCCGTGTCCTGGAGCTGTCCCTGTTC
GCCTGCATGATGGTCTGCGGCTCCATGAGAGCCAAGCTGACCCACGGACC
CACCAACGAGCTGGAGCAATGAAAGCTTTCTAGACCAT
BS16029.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:23:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15704-RA | 156 | CG15704-PA | 1..156 | 17..172 | 780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:23:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15704-RA | 456 | CG15704-RA | 179..334 | 17..172 | 780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:23:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16280193..16280348 | 17..172 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:23:08 has no hits.
BS16029.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:53 Download gff for
BS16029.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 1..156 | 17..172 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:39 Download gff for
BS16029.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 180..334 | 17..171 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:06 Download gff for
BS16029.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 179..333 | 17..171 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:17:54 Download gff for
BS16029.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 171..335 | 9..172 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:18 Download gff for
BS16029.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15704-RA | 179..333 | 17..171 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:18 Download gff for
BS16029.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16280193..16280347 | 17..171 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:06 Download gff for
BS16029.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12167698..12167852 | 17..171 | 100 | | Plus |
BS16029.pep Sequence
Translation from 168 to 182
> BS16029.pep
MKAF*
Sequence BS16029.pep has no blast hits.