Clone BS16032 Report

Search the DGRC for BS16032

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:160
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG14818-RA
Protein status:BS16032.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16032.3prime Sequence

321 bp (321 high quality bases) assembled on 2007-04-16

> BS16032.3prime
ATGGTCTAGAAAGCTTCTACTTGGGTGCCGCTTCGCTGCCCGCCTGCCCG
TCCATGTTGTCATCTCCCGATTCGGGAGCGTTGTCATTTTCCTCGGCAAT
CAGGCGACGGATCTCTCGGTTGGAGTTCAGCAGCTCCCGTAGTTGGGACA
TAATGTCGTCTGTGCGCTGCTCCACGGCGTCCAGGGCACAGCTGAGAGCG
TCCAGACTGTTGTTCACGTCCTCCATCTCTTGGAGGTCCGCCTCCTGGAC
ATTGGTGTTGCCAGAGTCGCCGGACGACGAGGGATCATGATTGTTTTTGG
GTGACATGTCGACTGATAACT

BS16032.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-PA 291 CG14818-RA 1..291 307..17 1455 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 598 CG14818-RB 188..479 307..16 1460 100 Minus
CG14818-RA 501 CG14818-RA 91..382 307..16 1460 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:38:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1879138..1879352 16..230 1075 100 Plus
X 23542271 X 1879412..1879490 229..307 395 100 Plus
Blast to na_te.dros performed on 2015-02-11 04:38:58 has no hits.

BS16032.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:26 Download gff for BS16032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-PA 1..291 17..307 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:11:23 Download gff for BS16032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..390 7..315 97   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:09:06 Download gff for BS16032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..390 7..315 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:09:06 Download gff for BS16032.3prime
Subject Subject Range Query Range Percent Splice Strand
X 1879130..1879350 7..228 98 <- Plus
X 1879412..1879498 229..315 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:11:23 Download gff for BS16032.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1773163..1773383 7..228 98 <- Plus
arm_X 1773445..1773531 229..315 95   Plus

BS16032.5prime Sequence

321 bp (321 high quality bases) assembled on 2007-04-16

> BS16032.5prime
GAAGTTATCAGTCGACATGTCACCCAAAAACAATCATGATCCCTCGTCGT
CCGGCGACTCTGGCAACACCAATGTCCAGGAGGCGGACCTCCAAGAGATG
GAGGACGTGAACAACAGTCTGGACGCTCTCAGCTGTGCCCTGGACGCCGT
GGAGCAGCGCACAGACGACATTATGTCCCAACTACGGGAGCTGCTGAACT
CCAACCGAGAGATCCGTCGCCTGATTGCCGAGGAAAATGACAACGCTCCC
GAATCGGGAGATGACAACATGGACGGGCAGGCGGGCAGCGAAGCGGCACC
CAAGTAGAAGCTTTCTAGACC

BS16032.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-PA 291 CG14818-RA 1..291 17..307 1455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 598 CG14818-RB 188..479 17..308 1460 100 Plus
CG14818-RA 501 CG14818-RA 91..382 17..308 1460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:57:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1879138..1879352 308..94 1075 100 Minus
X 23542271 X 1879412..1879490 95..17 395 100 Minus
Blast to na_te.dros performed on 2015-02-13 07:57:36 has no hits.

BS16032.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:26 Download gff for BS16032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-PA 1..291 17..307 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:49:23 Download gff for BS16032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..390 9..317 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:53:24 Download gff for BS16032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..390 9..317 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:53:24 Download gff for BS16032.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1879130..1879350 96..317 98 <- Minus
X 1879412..1879498 9..95 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:49:23 Download gff for BS16032.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1773445..1773531 9..95 95   Minus
arm_X 1773163..1773383 96..317 98 <- Minus

BS16032.complete Sequence

323 bp assembled on 2007-05-07

GenBank Submission: FJ638028

> BS16032.complete
GAAGTTATCAGTCGACATGTCACCCAAAAACAATCATGATCCCTCGTCGT
CCGGCGACTCTGGCAACACCAATGTCCAGGAGGCGGACCTCCAAGAGATG
GAGGACGTGAACAACAGTCTGGACGCTCTCAGCTGTGCCCTGGACGCCGT
GGAGCAGCGCACAGACGACATTATGTCCCAACTACGGGAGCTGCTGAACT
CCAACCGAGAGATCCGTCGCCTGATTGCCGAGGAAAATGACAACGCTCCC
GAATCGGGAGATGACAACATGGACGGGCAGGCGGGCAGCGAAGCGGCACC
CAAGTAGAAGCTTTCTAGACCAT

BS16032.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:22:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 291 CG14818-PB 1..291 17..307 1455 100 Plus
CG14818-RA 291 CG14818-PA 1..291 17..307 1455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 598 CG14818-RB 188..479 17..308 1460 100 Plus
CG14818-RA 501 CG14818-RA 91..382 17..308 1460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1879138..1879352 308..94 1075 100 Minus
X 23542271 X 1879412..1879490 95..17 395 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:22:26 has no hits.

BS16032.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:20:23 Download gff for BS16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 1..291 17..307 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:57:24 Download gff for BS16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 85..392 9..317 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:52 Download gff for BS16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 91..381 17..307 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:20:24 Download gff for BS16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 85..392 9..317 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:20 Download gff for BS16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 91..381 17..307 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:20 Download gff for BS16032.complete
Subject Subject Range Query Range Percent Splice Strand
X 1879139..1879350 96..307 100 <- Minus
X 1879412..1879490 17..95 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:52 Download gff for BS16032.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1773172..1773383 96..307 100 <- Minus
arm_X 1773445..1773523 17..95 100   Minus

BS16032.pep Sequence

Translation from 16 to 306

> BS16032.pep
MSPKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDALSCALDAVEQRTD
DIMSQLRELLNSNREIRRLIAEENDNAPESGDDNMDGQAGSEAAPK*

BS16032.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-PB 96 CG14818-PB 1..96 1..96 489 100 Plus
CG14818-PA 96 CG14818-PA 1..96 1..96 489 100 Plus