Clone Sequence Records
BS16032.3prime Sequence
321 bp (321 high quality bases) assembled on 2007-04-16
> BS16032.3prime
ATGGTCTAGAAAGCTTCTACTTGGGTGCCGCTTCGCTGCCCGCCTGCCCG
TCCATGTTGTCATCTCCCGATTCGGGAGCGTTGTCATTTTCCTCGGCAAT
CAGGCGACGGATCTCTCGGTTGGAGTTCAGCAGCTCCCGTAGTTGGGACA
TAATGTCGTCTGTGCGCTGCTCCACGGCGTCCAGGGCACAGCTGAGAGCG
TCCAGACTGTTGTTCACGTCCTCCATCTCTTGGAGGTCCGCCTCCTGGAC
ATTGGTGTTGCCAGAGTCGCCGGACGACGAGGGATCATGATTGTTTTTGG
GTGACATGTCGACTGATAACT
BS16032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14818-PA | 291 | CG14818-RA | 1..291 | 307..17 | 1455 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:39:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14818-RB | 598 | CG14818-RB | 188..479 | 307..16 | 1460 | 100 | Minus |
CG14818-RA | 501 | CG14818-RA | 91..382 | 307..16 | 1460 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:38:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1879138..1879352 | 16..230 | 1075 | 100 | Plus |
X | 23542271 | X | 1879412..1879490 | 229..307 | 395 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:38:58 has no hits.
BS16032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:26 Download gff for
BS16032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-PA | 1..291 | 17..307 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:11:23 Download gff for
BS16032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 83..390 | 7..315 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:09:06 Download gff for
BS16032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 83..390 | 7..315 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:09:06 Download gff for
BS16032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1879130..1879350 | 7..228 | 98 | <- | Plus |
X | 1879412..1879498 | 229..315 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:11:23 Download gff for
BS16032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1773163..1773383 | 7..228 | 98 | <- | Plus |
arm_X | 1773445..1773531 | 229..315 | 95 | | Plus |
BS16032.5prime Sequence
321 bp (321 high quality bases) assembled on 2007-04-16
> BS16032.5prime
GAAGTTATCAGTCGACATGTCACCCAAAAACAATCATGATCCCTCGTCGT
CCGGCGACTCTGGCAACACCAATGTCCAGGAGGCGGACCTCCAAGAGATG
GAGGACGTGAACAACAGTCTGGACGCTCTCAGCTGTGCCCTGGACGCCGT
GGAGCAGCGCACAGACGACATTATGTCCCAACTACGGGAGCTGCTGAACT
CCAACCGAGAGATCCGTCGCCTGATTGCCGAGGAAAATGACAACGCTCCC
GAATCGGGAGATGACAACATGGACGGGCAGGCGGGCAGCGAAGCGGCACC
CAAGTAGAAGCTTTCTAGACC
BS16032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14818-PA | 291 | CG14818-RA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:57:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14818-RB | 598 | CG14818-RB | 188..479 | 17..308 | 1460 | 100 | Plus |
CG14818-RA | 501 | CG14818-RA | 91..382 | 17..308 | 1460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:57:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1879138..1879352 | 308..94 | 1075 | 100 | Minus |
X | 23542271 | X | 1879412..1879490 | 95..17 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:57:36 has no hits.
BS16032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:26 Download gff for
BS16032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-PA | 1..291 | 17..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:49:23 Download gff for
BS16032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 83..390 | 9..317 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:53:24 Download gff for
BS16032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 83..390 | 9..317 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:53:24 Download gff for
BS16032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1879130..1879350 | 96..317 | 98 | <- | Minus |
X | 1879412..1879498 | 9..95 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:49:23 Download gff for
BS16032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1773445..1773531 | 9..95 | 95 | | Minus |
arm_X | 1773163..1773383 | 96..317 | 98 | <- | Minus |
BS16032.complete Sequence
323 bp assembled on 2007-05-07
GenBank Submission: FJ638028
> BS16032.complete
GAAGTTATCAGTCGACATGTCACCCAAAAACAATCATGATCCCTCGTCGT
CCGGCGACTCTGGCAACACCAATGTCCAGGAGGCGGACCTCCAAGAGATG
GAGGACGTGAACAACAGTCTGGACGCTCTCAGCTGTGCCCTGGACGCCGT
GGAGCAGCGCACAGACGACATTATGTCCCAACTACGGGAGCTGCTGAACT
CCAACCGAGAGATCCGTCGCCTGATTGCCGAGGAAAATGACAACGCTCCC
GAATCGGGAGATGACAACATGGACGGGCAGGCGGGCAGCGAAGCGGCACC
CAAGTAGAAGCTTTCTAGACCAT
BS16032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:22:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14818-RB | 291 | CG14818-PB | 1..291 | 17..307 | 1455 | 100 | Plus |
CG14818-RA | 291 | CG14818-PA | 1..291 | 17..307 | 1455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14818-RB | 598 | CG14818-RB | 188..479 | 17..308 | 1460 | 100 | Plus |
CG14818-RA | 501 | CG14818-RA | 91..382 | 17..308 | 1460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1879138..1879352 | 308..94 | 1075 | 100 | Minus |
X | 23542271 | X | 1879412..1879490 | 95..17 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:22:26 has no hits.
BS16032.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:20:23 Download gff for
BS16032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 1..291 | 17..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:57:24 Download gff for
BS16032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 85..392 | 9..317 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:52 Download gff for
BS16032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 91..381 | 17..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:20:24 Download gff for
BS16032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 85..392 | 9..317 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:20 Download gff for
BS16032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14818-RA | 91..381 | 17..307 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:20 Download gff for
BS16032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1879139..1879350 | 96..307 | 100 | <- | Minus |
X | 1879412..1879490 | 17..95 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:52 Download gff for
BS16032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1773172..1773383 | 96..307 | 100 | <- | Minus |
arm_X | 1773445..1773523 | 17..95 | 100 | | Minus |
BS16032.pep Sequence
Translation from 16 to 306
> BS16032.pep
MSPKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDALSCALDAVEQRTD
DIMSQLRELLNSNREIRRLIAEENDNAPESGDDNMDGQAGSEAAPK*
BS16032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:51:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14818-PB | 96 | CG14818-PB | 1..96 | 1..96 | 489 | 100 | Plus |
CG14818-PA | 96 | CG14818-PA | 1..96 | 1..96 | 489 | 100 | Plus |