Clone Sequence Records
BS16045.5prime Sequence
297 bp (297 high quality bases) assembled on 2007-04-16
> BS16045.5prime
GAAGTTATCAGTCGACATGTGTAGTTTAGTTGCAGTTTCGATTCACATCG
GATTGCCTTGCCCAGGCAGCACATCAATCATCCATCACGCACCAAAGGCC
GGGAGACAACGACCCAAAACGGGCAGTGCAAACCTGAATGGCAAACGGCC
CATGCCACGCATGCGATTTATACGTGTCCAAGGTTCACTCTGGATCGCAA
TGGATGCAATTTGGCCACTTCACTGCACATTTGACCGGATTAAAATTCCT
TTCAAATGGCTATATGCTACTAAGCTCTTTTAAAAGCTTTCTAGACC
BS16045.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-PA | 267 | CG32102-RA | 1..267 | 17..283 | 1335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:40:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 544 | CG32102-RA | 192..460 | 16..284 | 1345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12469156..12469424 | 284..16 | 1345 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:40:29 has no hits.
BS16045.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:34 Download gff for
BS16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-PA | 1..267 | 17..283 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:13:29 Download gff for
BS16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..460 | 7..284 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:23:34 Download gff for
BS16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..460 | 7..284 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:23:34 Download gff for
BS16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12469156..12469431 | 7..284 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:13:29 Download gff for
BS16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12462256..12462531 | 7..284 | 98 | | Minus |
BS16045.3prime Sequence
297 bp (297 high quality bases) assembled on 2007-04-16
> BS16045.3prime
ATGGTCTAGAAAGCTTTTAAAAGAGCTTAGTAGCATATAGCCATTTGAAA
GGAATTTTAATCCGGTCAAATGTGCAGTGAAGTGGCCAAATTGCATCCAT
TGCGATCCAGAGTGAACCTTGGACACGTATAAATCGCATGCGTGGCATGG
GCCGTTTGCCATTCAGGTTTGCACTGCCCGTTTTGGGTCGTTGTCTCCCG
GCCTTTGGTGCGTGATGGATGATTGATGTGCTGCCTGGGCAAGGCAATCC
GATGTGAATCGAAACTGCAACTAAACTACACATGTCGACTGATAACT
BS16045.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-PA | 267 | CG32102-RA | 1..267 | 283..17 | 1335 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 544 | CG32102-RA | 192..460 | 284..16 | 1345 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12469156..12469424 | 16..284 | 1345 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:40:17 has no hits.
BS16045.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:34 Download gff for
BS16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-PA | 1..267 | 17..283 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:13:27 Download gff for
BS16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..460 | 16..293 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:22:58 Download gff for
BS16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..460 | 16..293 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:22:58 Download gff for
BS16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12469156..12469431 | 16..293 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:13:27 Download gff for
BS16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12462256..12462531 | 16..293 | 98 | | Plus |
BS16045.complete Sequence
299 bp assembled on 2007-05-07
GenBank Submission: FJ638034
> BS16045.complete
GAAGTTATCAGTCGACATGTGTAGTTTAGTTGCAGTTTCGATTCACATCG
GATTGCCTTGCCCAGGCAGCACATCAATCATCCATCACGCACCAAAGGCC
GGGAGACAACGACCCAAAACGGGCAGTGCAAACCTGAATGGCAAACGGCC
CATGCCACGCATGCGATTTATACGTGTCCAAGGTTCACTCTGGATCGCAA
TGGATGCAATTTGGCCACTTCACTGCACATTTGACCGGATTAAAATTCCT
TTCAAATGGCTATATGCTACTAAGCTCTTTTAAAAGCTTTCTAGACCAT
BS16045.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:32:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 267 | CG32102-PA | 1..267 | 17..283 | 1335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:32:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 544 | CG32102-RA | 192..460 | 16..284 | 1345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:32:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12469156..12469424 | 284..16 | 1345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:32:24 has no hits.
BS16045.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:03:43 Download gff for
BS16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 1..267 | 17..283 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:16:06 Download gff for
BS16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..460 | 7..284 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:45:53 Download gff for
BS16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 193..457 | 17..281 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:03:44 Download gff for
BS16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..460 | 7..284 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:13:55 Download gff for
BS16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 193..457 | 17..281 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:13:55 Download gff for
BS16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12469159..12469423 | 17..281 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:45:53 Download gff for
BS16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12462259..12462523 | 17..281 | 100 | | Minus |
BS16045.pep Sequence
Translation from 16 to 282
> BS16045.pep
MCSLVAVSIHIGLPCPGSTSIIHHAPKAGRQRPKTGSANLNGKRPMPRMR
FIRVQGSLWIAMDAIWPLHCTFDRIKIPFKWLYATKLF*
BS16045.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-PA | 88 | CG32102-PA | 1..88 | 1..88 | 482 | 100 | Plus |
