Clone Sequence Records
BS16052.complete Sequence
329 bp assembled on 2010-02-09
GenBank Submission: KX803639
> BS16052.complete
GAAGTTATCAGTCGACATGATTTTGGAGGAACTGGCTCGTACGCATCCAG
ATGGAAGGCGTGACTATATATATTATCTTGCGTTTGGTAATGCTCGTATC
AAGGAGTATACGTCTGGCTTAAAATACTGCCGAGCTTTTCTTGACATCGA
GTCAAATGATCAAGTTCGCTCCCTAGAGGAATATATTAAAAAAGAAATCG
ATAAGGAAGTGGCAAAGGGTATGGTGGTTGCAGGCGGAGCAGCTTTAGTA
CTTGGCGGAATATTAGGACTTGGCATTGCTATGGCTAGAAATAAACAAAA
ACGGGAGAAATAGAAGCTTTCTAGACCAT
BS16052.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fis1-RG | 297 | CG17510-PG | 1..297 | 17..313 | 1485 | 100 | Plus |
| Fis1-RC | 465 | CG17510-PC | 169..465 | 17..313 | 1485 | 100 | Plus |
| Fis1-RA | 297 | CG17510-PA | 1..297 | 17..313 | 1485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fis1-RG | 557 | CG17510-RG | 108..404 | 17..313 | 1485 | 100 | Plus |
| Fis1-RC | 698 | CG17510-RC | 249..545 | 17..313 | 1485 | 100 | Plus |
| Fis1-RA | 630 | CG17510-RA | 181..477 | 17..313 | 1485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5604243..5604405 | 179..17 | 815 | 100 | Minus |
| 2R | 25286936 | 2R | 5603900..5604014 | 291..177 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:32:12 has no hits.
BS16052.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:04 Download gff for
BS16052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17510-RC | 243..533 | 17..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:22 Download gff for
BS16052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..471 | 17..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:03:07 Download gff for
BS16052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17510-RC | 243..533 | 17..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:31:09 Download gff for
BS16052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..471 | 17..307 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:31:09 Download gff for
BS16052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5603746..5603761 | 292..307 | 100 | <- | Minus |
| 2R | 5603900..5604012 | 179..291 | 100 | <- | Minus |
| 2R | 5604244..5604405 | 17..178 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:22 Download gff for
BS16052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1491251..1491266 | 292..307 | 100 | <- | Minus |
| arm_2R | 1491405..1491517 | 179..291 | 100 | <- | Minus |
| arm_2R | 1491749..1491910 | 17..178 | 100 | | Minus |
BS16052.5prime Sequence
327 bp (327 high quality bases) assembled on 2007-04-16
> BS16052.5prime
GAAGTTATCCGTCGACATGATTTTGGAGGAACTGGCTCGTACGCATCCAG
ATGGAAGGCGTGACTATATATATTATCTTGCGTTTGGTAATGCTCGTATC
AAGGAGTATACGTCTGGCTTAAAATACTGCCGAGCTTTTCTTGACATCGA
GTCAAATGATCAAGTTCGCTCCCTAGAGGAATATATTAAAAAAGAAATCG
ATAAGGAAGTGGCAAAGGGTATGGTGGTTGCAGGCGGAGCAGCTTTAGTA
CTTGGCGGAATATTAGGACTTGGCATTGCTATGGCTAGAAATAAACAAAA
ACGGGAGAAATAGAAGCTTTCTAGACC
BS16052.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17510-PA | 297 | CG17510-RA | 1..297 | 17..313 | 1485 | 100 | Plus |
| CG17510-PB | 279 | CG17510-RB | 1..275 | 17..291 | 1375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fis1-RG | 557 | CG17510-RG | 108..404 | 17..313 | 1485 | 100 | Plus |
| Fis1-RC | 698 | CG17510-RC | 249..545 | 17..313 | 1485 | 100 | Plus |
| Fis1-RA | 630 | CG17510-RA | 181..477 | 17..313 | 1485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:04:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5604243..5604405 | 179..17 | 815 | 100 | Minus |
| 2R | 25286936 | 2R | 5603900..5604014 | 291..177 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:04:39 has no hits.
BS16052.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:38 Download gff for
BS16052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17510-PA | 1..297 | 17..313 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:20:06 Download gff for
BS16052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..477 | 17..313 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:46 Download gff for
BS16052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..477 | 17..313 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:46 Download gff for
BS16052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5603740..5603761 | 292..313 | 100 | <- | Minus |
| 2R | 5603900..5604012 | 179..291 | 100 | <- | Minus |
| 2R | 5604244..5604405 | 17..178 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:20:06 Download gff for
BS16052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1491245..1491266 | 292..313 | 100 | <- | Minus |
| arm_2R | 1491405..1491517 | 179..291 | 100 | <- | Minus |
| arm_2R | 1491749..1491910 | 17..178 | 100 | | Minus |
BS16052.3prime Sequence
336 bp (245 high quality bases) assembled on 2007-04-16
> BS16052.3prime
ATGGTCTAGAAAGCTTCTATCTCTCCCGTTTTTGTTTATTTCTAGCCATA
GCAATGCCAAGTCCTAATATTCCGCCAAGTACTAAAGCTGCTCCGCCTGC
AACCACCATACCCTTTGCCACTTCCTTATCGATTTCTTTTTTAATATATT
CCTCTAGGGAGCGAACTTGATCATTTGACTCGATGTCAAGAAAAGCTCGG
CAGTATTTTAAGCCAGACGTATACTCCTTGATACGAGCATTACCAAACGC
AAGATAATATATATAGTCACGCCTTCCATCTGGATGCGTACGAGCCAGTT
CCTCCAAAAACATGTCGACTGATAACTTCCTAAAAG
BS16052.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17510-PA | 297 | CG17510-RA | 5..292 | 309..22 | 1440 | 100 | Minus |
| CG17510-PB | 279 | CG17510-RB | 5..275 | 309..39 | 1355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:40:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fis1-RG | 557 | CG17510-RG | 108..404 | 313..17 | 1455 | 99.3 | Minus |
| Fis1-RC | 698 | CG17510-RC | 249..545 | 313..17 | 1455 | 99.3 | Minus |
| Fis1-RA | 630 | CG17510-RA | 181..477 | 313..17 | 1455 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:40:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5604243..5604405 | 151..313 | 800 | 99.4 | Plus |
| 2R | 25286936 | 2R | 5603900..5604014 | 39..153 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:40:42 has no hits.
BS16052.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:38 Download gff for
BS16052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17510-PA | 1..297 | 17..313 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:13:31 Download gff for
BS16052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..477 | 17..313 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:24:04 Download gff for
BS16052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..477 | 17..313 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:24:04 Download gff for
BS16052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5603740..5603761 | 17..38 | 95 | <- | Plus |
| 2R | 5603900..5604012 | 39..151 | 100 | <- | Plus |
| 2R | 5604244..5604405 | 152..313 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:13:31 Download gff for
BS16052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1491245..1491266 | 17..38 | 95 | <- | Plus |
| arm_2R | 1491405..1491517 | 39..151 | 100 | <- | Plus |
| arm_2R | 1491749..1491910 | 152..313 | 99 | | Plus |
BS16052.pep Sequence
Translation from 16 to 312
> BS16052.pep
MILEELARTHPDGRRDYIYYLAFGNARIKEYTSGLKYCRAFLDIESNDQV
RSLEEYIKKEIDKEVAKGMVVAGGAALVLGGILGLGIAMARNKQKREK*
BS16052.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fis1-PG | 98 | CG17510-PG | 1..98 | 1..98 | 495 | 100 | Plus |
| Fis1-PA | 98 | CG17510-PA | 1..98 | 1..98 | 495 | 100 | Plus |
| Fis1-PC | 154 | CG17510-PC | 57..154 | 1..98 | 495 | 100 | Plus |
| Fis1-PF | 92 | CG17510-PF | 1..91 | 1..91 | 459 | 100 | Plus |
| Fis1-PD | 92 | CG17510-PD | 1..91 | 1..91 | 459 | 100 | Plus |
