Clone Sequence Records
BS16059.3prime Sequence
492 bp (492 high quality bases) assembled on 2007-04-16
> BS16059.3prime
ATGGTCTAGAAAGCTTCTAGTTCTTCTGCAGCTTATCCACGTCCTGAATG
TAATCAGTGCCGACCTTCACGATGGCGGCGCCAGTTCCCAAGCCCGCCAG
GGTCGCCAGCAGTGCATTGTCCTGTGGCAGGGCGGACTTGATGAGCGCCC
AGGCCAGAACGGATCCCATGGAGAATAGGGTGGCGCCCAGCAGGGCGTAC
GCACCTCGCTTGTTGTTCTTCACGTCCTTCAGGTGGGGCCTGCCGTAAAT
GTAGAAGGCACTGCCCACCACCGCGGAGATGAGGAACACGTTCGTCAGGT
CCTTCTTGGGCAGGATTTTGGGCACGATCTGGGGGTTCATAACATTCACC
GCAAGGGCTCCGTAGCTCACCAGGCCGTGCAGCGGTATGTAGTAGTTGAA
CACATTATCCCGGGTGAAGGGCTTGAGGCCCACTTTGTCGCATATGCTGC
AGGCGTCTTTTGACTGTGTCCCGGCCATGTCGACTGATAACT
BS16059.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:31:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13220-PA | 462 | CG13220-RA | 1..462 | 478..17 | 2310 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:38:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13220-RB | 816 | CG13220-RB | 216..678 | 478..16 | 2315 | 100 | Minus |
CG13220-RA | 685 | CG13220-RA | 85..547 | 478..16 | 2315 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:38:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11284498..11284960 | 478..16 | 2315 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:38:05 has no hits.
BS16059.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:44 Download gff for
BS16059.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-PA | 1..462 | 17..478 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 06:55:27 Download gff for
BS16059.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 85..547 | 16..478 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:29 Download gff for
BS16059.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 85..547 | 16..478 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:29 Download gff for
BS16059.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11284498..11284960 | 16..478 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 06:55:27 Download gff for
BS16059.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7172003..7172465 | 16..478 | 100 | | Minus |
BS16059.5prime Sequence
492 bp (492 high quality bases) assembled on 2007-04-16
> BS16059.5prime
GAAGTTATCAGTCGACATGGCCGGGACACAGTCAAAAGACGCCTGCAGCA
TATGCGACAAAGTGGGCCTCAAGCCCTTCACCCGGGATAATGTGTTCAAC
TACTACATACCGCTGCACGGCCTGGTGAGCTACGGAGCCCTTGCGGTGAA
TGTTATGAACCCCCAGATCGTGCCCAAAATCCTGCCCAAGAAGGACCTGA
CGAACGTGTTCCTCATCTCCGCGGTGGTGGGCAGTGCCTTCTACATTTAC
GGCAGGCCCCACCTGAAGGACGTGAAGAACAACAAGCGAGGTGCGTACGC
CCTGCTGGGCGCCACCCTATTCTCCATGGGATCCGTTCTGGCCTGGGCGC
TCATCAAGTCCGCCCTGCCACAGGACAATGCACTGCTGGCGACCCTGGCG
GGCTTGGGAACTGGCGCCGCCATCGTGAAGGTCGGCACTGATTACATTCA
GGACGTGGATAAGCTGCAGAAGAACTAGAAGCTTTCTAGACC
BS16059.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:31:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13220-PA | 462 | CG13220-RA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:41:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13220-RB | 816 | CG13220-RB | 216..678 | 17..479 | 2315 | 100 | Plus |
CG13220-RA | 685 | CG13220-RA | 85..547 | 17..479 | 2315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:40:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11284498..11284960 | 17..479 | 2315 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:40:56 has no hits.
BS16059.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:44 Download gff for
BS16059.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-PA | 1..462 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:13:34 Download gff for
BS16059.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 85..547 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:24:45 Download gff for
BS16059.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 85..547 | 17..479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:24:45 Download gff for
BS16059.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11284498..11284960 | 17..479 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:13:34 Download gff for
BS16059.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7172003..7172465 | 17..479 | 100 | | Plus |
BS16059.complete Sequence
494 bp assembled on 2007-05-07
GenBank Submission: FJ638042
> BS16059.complete
GAAGTTATCAGTCGACATGGCCGGGACACAGTCAAAAGACGCCTGCAGCA
TATGCGACAAAGTGGGCCTCAAGCCCTTCACCCGGGATAATGTGTTCAAC
TACTACATACCGCTGCACGGCCTGGTGAGCTACGGAGCCCTTGCGGTGAA
TGTTATGAACCCCCAGATCGTGCCCAAAATCCTGCCCAAGAAGGACCTGA
CGAACGTGTTCCTCATCTCCGCGGTGGTGGGCAGTGCCTTCTACATTTAC
GGCAGGCCCCACCTGAAGGACGTGAAGAACAACAAGCGAGGTGCGTACGC
CCTGCTGGGCGCCACCCTATTCTCCATGGGATCCGTTCTGGCCTGGGCGC
TCATCAAGTCCGCCCTGCCACAGGACAATGCACTGCTGGCGACCCTGGCG
GGCTTGGGAACTGGCGCCGCCATCGTGAAGGTCGGCACTGATTACATTCA
GGACGTGGATAAGCTGCAGAAGAACTAGAAGCTTTCTAGACCAT
BS16059.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:00:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13220-RB | 462 | CG13220-PB | 1..462 | 17..478 | 2310 | 100 | Plus |
CG13220-RA | 462 | CG13220-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:00:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13220-RB | 816 | CG13220-RB | 216..678 | 17..479 | 2315 | 100 | Plus |
CG13220-RA | 685 | CG13220-RA | 85..547 | 17..479 | 2315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:59:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11284498..11284960 | 17..479 | 2315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 02:00:00 has no hits.
BS16059.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:20:11 Download gff for
BS16059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 1..462 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:01:18 Download gff for
BS16059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 83..545 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:07:00 Download gff for
BS16059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 85..546 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:20:11 Download gff for
BS16059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 83..545 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:35:46 Download gff for
BS16059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13220-RA | 85..546 | 17..478 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:35:46 Download gff for
BS16059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11284498..11284959 | 17..478 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:07:00 Download gff for
BS16059.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7172003..7172464 | 17..478 | 100 | | Plus |
BS16059.pep Sequence
Translation from 16 to 477
> BS16059.pep
MAGTQSKDACSICDKVGLKPFTRDNVFNYYIPLHGLVSYGALAVNVMNPQ
IVPKILPKKDLTNVFLISAVVGSAFYIYGRPHLKDVKNNKRGAYALLGAT
LFSMGSVLAWALIKSALPQDNALLATLAGLGTGAAIVKVGTDYIQDVDKL
QKN*
BS16059.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:51:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13220-PB | 153 | CG13220-PB | 1..153 | 1..153 | 782 | 100 | Plus |
CG13220-PA | 153 | CG13220-PA | 1..153 | 1..153 | 782 | 100 | Plus |