Clone Sequence Records
BS16077.3prime Sequence
756 bp (756 high quality bases) assembled on 2007-04-16
> BS16077.3prime
ATGGTCTAGAAAGCTTTCACGCACTTGCCGCATGAGGTTTTGCATAGCTG
GGGAAGTTCAGTTTCAGACCCTCCTTGGCCTCGAAGAAGGTGTACGAAAG
GGTGATGGTGTCACAGGTCTCCAGCGCCGGATCTGCCGTTATTTCGGGAT
CGATGTAGAAGAAGACGGGCATGTCCACCTCCTCGTGTGGATTCAGTTGC
TGTTCCTCGAAGCAAAAGCATTGGATTTTGTTGAAATACGCGCCCGCCTC
GAAGGGAATCACATTGTACGTGCTGATGCCAATTACCGGCTTATCCGTGG
GATTTCGCGCCGTGTAAAAGGCCAGAGCAGTCTCGCCAGGAGCTACTTTG
ATCTCGTACTGCTGCGGCTTGAAGTTCCAGCGCATCGAGGATCCAATGTC
GGCGTTGAAACGGATCTTCAGCACCCGATCCTCGATCTTTTTCATGTGCT
CCACCTTTTCGGCATCGTGCCCCTGCGTGGTGGTCCCTCCGTAACTGTAG
GCCTGGCAGAAGATGCTGTACAGCGGCACAGCAGCATAGCTCAGGCCCAC
AATCAGCACACCGCCGGCGGTTATGTAGTAGAGTGTGGATTTCGCACGCA
ATTTACGGGCGGCATCCTCCGGAGAATCCGTCGATTTCATGCGCCAAAAT
TGTTGTGACTTATGGACTGAGTTTTGAGGGCGGATGGAGCTCCTGAACAG
TTGCTGGCATTGTCCACGGAGGGCACAAAGGCTGCGCATCATGTCGACTG
ATAACT
BS16077.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:35:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31648-PA | 726 | CG31648-RA | 1..726 | 742..17 | 3630 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31648-RA | 898 | CG31648-RA | 119..845 | 742..16 | 3635 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5527075..5527801 | 742..16 | 3635 | 100 | Minus |
Blast to na_te.dros performed 2015-02-13 07:58:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver | 6112 | diver Tinker 6112bp | 4954..4993 | 386..348 | 116 | 80 | Minus |
BS16077.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:56 Download gff for
BS16077.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-PA | 1..726 | 17..742 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:49:37 Download gff for
BS16077.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 119..845 | 16..742 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:57:04 Download gff for
BS16077.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 119..845 | 16..742 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:57:04 Download gff for
BS16077.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5527075..5527801 | 16..742 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:49:37 Download gff for
BS16077.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5527075..5527801 | 16..742 | 100 | | Minus |
BS16077.5prime Sequence
756 bp (756 high quality bases) assembled on 2007-04-16
> BS16077.5prime
GAAGTTATCAGTCGACATGATGCGCAGCCTTTGTGCCCTCCGTGGACAAT
GCCAGCAACTGTTCAGGAGCTCCATCCGCCCTCAAAACTCAGTCCATAAG
TCACAACAATTTTGGCGCATGAAATCGACGGATTCTCCGGAGGATGCCGC
CCGTAAATTGCGTGCGAAATCCACACTCTACTACATAACCGCCGGCGGTG
TGCTGATTGTGGGCCTGAGCTATGCTGCTGTGCCGCTGTACAGCATCTTC
TGCCAGGCCTACAGTTACGGAGGGACCACCACGCAGGGGCACGATGCCGA
AAAGGTGGAGCACATGAAAAAGATCGAGGATCGGGTGCTGAAGATCCGTT
TCAACGCCGACATTGGATCCTCGATGCGCTGGAACTTCAAGCCGCAGCAG
TACGAGATCAAAGTAGCTCCTGGCGAGACTGCTCTGGCCTTTTACACGGC
GCGAAATCCCACGGATAAGCCGGTAATTGGCATCAGCACGTACAATGTGA
TTCCCTTCGAGGCGGGCGCGTATTTCAACAAAATCCAATGCTTTTGCTTC
GAGGAACAGCAACTGAATCCACACGAGGAGGTGGACATGCCCGTCTTCTT
CTACATCGATCCCGAAATAACGGCAGATCCGGCGCTGGAGACCTGTGACA
CCATCACCCTTTCGTACACCTTCTTCGAGGCCAAGGAGGGTCTGAAACTG
AACTTCCCCAGCTATGCAAAACCTCATGCGGCAAGTGCGTGAAAGCTTTC
TAGACC
BS16077.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:35:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31648-PA | 726 | CG31648-RA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:05:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31648-RA | 898 | CG31648-RA | 119..845 | 17..743 | 3635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:05:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5527075..5527801 | 17..743 | 3635 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 05:05:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver | 6112 | diver Tinker 6112bp | 4954..4993 | 373..411 | 116 | 80 | Plus |
BS16077.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:01:56 Download gff for
BS16077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-PA | 1..726 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:20:11 Download gff for
BS16077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 119..845 | 17..743 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:31:55 Download gff for
BS16077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 119..845 | 17..743 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:31:55 Download gff for
BS16077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5527075..5527801 | 17..743 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:20:11 Download gff for
BS16077.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5527075..5527801 | 17..743 | 100 | | Plus |
BS16077.complete Sequence
758 bp assembled on 2007-05-07
GenBank Submission: FJ638051
> BS16077.complete
GAAGTTATCAGTCGACATGATGCGCAGCCTTTGTGCCCTCCGTGGACAAT
GCCAGCAACTGTTCAGGAGCTCCATCCGCCCTCAAAACTCAGTCCATAAG
TCACAACAATTTTGGCGCATGAAATCGACGGATTCTCCGGAGGATGCCGC
CCGTAAATTGCGTGCGAAATCCACACTCTACTACATAACCGCCGGCGGTG
TGCTGATTGTGGGCCTGAGCTATGCTGCTGTGCCGCTGTACAGCATCTTC
TGCCAGGCCTACAGTTACGGAGGGACCACCACGCAGGGGCACGATGCCGA
AAAGGTGGAGCACATGAAAAAGATCGAGGATCGGGTGCTGAAGATCCGTT
TCAACGCCGACATTGGATCCTCGATGCGCTGGAACTTCAAGCCGCAGCAG
TACGAGATCAAAGTAGCTCCTGGCGAGACTGCTCTGGCCTTTTACACGGC
GCGAAATCCCACGGATAAGCCGGTAATTGGCATCAGCACGTACAATGTGA
TTCCCTTCGAGGCGGGCGCGTATTTCAACAAAATCCAATGCTTTTGCTTC
GAGGAACAGCAACTGAATCCACACGAGGAGGTGGACATGCCCGTCTTCTT
CTACATCGATCCCGAAATAACGGCAGATCCGGCGCTGGAGACCTGTGACA
CCATCACCCTTTCGTACACCTTCTTCGAGGCCAAGGAGGGTCTGAAACTG
AACTTCCCCAGCTATGCAAAACCTCATGCGGCAAGTGCGTGAAAGCTTTC
TAGACCAT
BS16077.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:20:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31648-RA | 726 | CG31648-PA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:20:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31648-RA | 898 | CG31648-RA | 119..845 | 17..743 | 3635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5527075..5527801 | 17..743 | 3635 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 14:20:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver | 6112 | diver Tinker 6112bp | 4954..4993 | 373..411 | 116 | 80 | Plus |
BS16077.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:19:07 Download gff for
BS16077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 1..726 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:00:10 Download gff for
BS16077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 113..838 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:32 Download gff for
BS16077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 119..843 | 17..741 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:19:07 Download gff for
BS16077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 113..838 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:09:16 Download gff for
BS16077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31648-RA | 119..843 | 17..741 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:09:16 Download gff for
BS16077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5527075..5527799 | 17..741 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:32 Download gff for
BS16077.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5527075..5527799 | 17..741 | 100 | | Plus |
BS16077.pep Sequence
Translation from 16 to 741
> BS16077.pep
MMRSLCALRGQCQQLFRSSIRPQNSVHKSQQFWRMKSTDSPEDAARKLRA
KSTLYYITAGGVLIVGLSYAAVPLYSIFCQAYSYGGTTTQGHDAEKVEHM
KKIEDRVLKIRFNADIGSSMRWNFKPQQYEIKVAPGETALAFYTARNPTD
KPVIGISTYNVIPFEAGAYFNKIQCFCFEEQQLNPHEEVDMPVFFYIDPE
ITADPALETCDTITLSYTFFEAKEGLKLNFPSYAKPHAASA*
BS16077.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:53:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31648-PA | 241 | CG31648-PA | 1..241 | 1..241 | 1274 | 100 | Plus |