Clone BS16114 Report

Search the DGRC for BS16114

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:161
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG32695-RA
Protein status:BS16114.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16114.5prime Sequence

270 bp (270 high quality bases) assembled on 2007-04-16

> BS16114.5prime
GAAGTTATCCCTCGACATGCGATCTGTACTGCCGTCGGTGGGATTTCTGC
TGCTCCTGGCTCTGCTGCTCGGCTCCTCGTGCACTGAATCCGGCAGGGTG
ATCTACTTCAATCAACTGAACACCACCCAAGCCCTAGAGGCGGCCAAAAA
CAACAGCGATGCCCTGGGCAAGGGAATGCTCCTTGATGTGCGCGGAAATC
GCTGCCCACGCGGATTCGTTCGCGATCATCATGGGCGTTGCAGAAGGCGT
GTCTAAAAGCTTTCTAGACC

BS16114.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG32695-PA 240 CG32695-RA 1..240 17..256 1200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32695-RC 1613 CG32695-RC 90..335 13..258 1215 99.6 Plus
CG32695-RB 512 CG32695-RB 22..267 13..258 1215 99.6 Plus
CG32695-RA 385 CG32695-RA 22..267 13..258 1215 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9873734..9873968 247..13 1160 99.6 Minus
Blast to na_te.dros performed on 2015-02-13 07:59:41 has no hits.

BS16114.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:02:15 Download gff for BS16114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32695-PA 1..240 17..256 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:49:46 Download gff for BS16114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 22..269 13..261 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:59:16 Download gff for BS16114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 22..269 13..261 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:59:16 Download gff for BS16114.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9873731..9873968 13..251 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:49:46 Download gff for BS16114.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9767764..9768001 13..251 99   Minus

BS16114.3prime Sequence

270 bp (270 high quality bases) assembled on 2007-04-16

> BS16114.3prime
ATGGTCTAGAAAGCTTTTAGACACGCCTTCTGCAACGCCCATGATGATCG
CGAACGAATCCGCGTGGGCAGCGATTTCCGCGCACATCAAGGAGCATTCC
CTTGCCCAGGGCATCGCTGTTGTTTTTGGCCGCCTCTAGGGCTTGGGTGG
TGTTCAGTTGATTGAAGTAGATCACCCTGCCGGATTCAGTGCACGAGGAG
CCGAGCAGCAGAGCCAGGAGCAGCAGAAATCCCACCGACGGCAGTACAGA
TCGCATGTCGACTGATAACT

BS16114.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:42:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32695-PA 240 CG32695-RA 1..240 256..17 1200 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:40:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32695-RC 1613 CG32695-RC 90..335 260..15 1215 99.6 Minus
CG32695-RB 512 CG32695-RB 22..267 260..15 1215 99.6 Minus
CG32695-RA 385 CG32695-RA 22..267 260..15 1215 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9873734..9873968 26..260 1160 99.6 Plus
Blast to na_te.dros performed on 2015-02-11 04:40:05 has no hits.

BS16114.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:02:14 Download gff for BS16114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32695-PA 1..240 17..256 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:11:43 Download gff for BS16114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 22..269 12..260 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:12:48 Download gff for BS16114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 22..269 12..260 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:12:48 Download gff for BS16114.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9873731..9873968 22..260 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:11:43 Download gff for BS16114.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9767764..9768001 22..260 99   Plus

BS16114.complete Sequence

272 bp assembled on 2007-05-07

GenBank Submission: FJ638064

> BS16114.complete
GAAGTTATCAGTCGACATGCGATCTGTACTGCCGTCGGTGGGATTTCTGC
TGCTCCTGGCTCTGCTGCTCGGCTCCTCGTGCACTGAATCCGGCAGGGTG
ATCTACTTCAATCAACTGAACACCACCCAAGCCCTAGAGGCGGCCAAAAA
CAACAGCGATGCCCTGGGCAAGGGAATGCTCCTTGATGTGCGCGGAAATC
GCTGCCCACGCGGATTCGTTCGCGATCATCATGGGCGTTGCAGAAGGCGT
GTCTAAAAGCTTTCTAGACCAT

BS16114.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:02:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32695-RC 240 CG32695-PC 1..240 17..256 1200 100 Plus
CG32695-RB 240 CG32695-PB 1..240 17..256 1200 100 Plus
CG32695-RA 240 CG32695-PA 1..240 17..256 1200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32695-RC 1613 CG32695-RC 90..335 13..258 1215 99.6 Plus
CG32695-RB 512 CG32695-RB 22..267 13..258 1215 99.6 Plus
CG32695-RA 385 CG32695-RA 22..267 13..258 1215 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9873734..9873968 247..13 1160 99.6 Minus
Blast to na_te.dros performed on 2014-11-27 01:02:02 has no hits.

BS16114.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:49:43 Download gff for BS16114.complete
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 1..240 17..256 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:38:08 Download gff for BS16114.complete
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 22..269 13..261 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:42:48 Download gff for BS16114.complete
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 26..263 17..254 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:49:43 Download gff for BS16114.complete
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 22..269 13..261 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:16:46 Download gff for BS16114.complete
Subject Subject Range Query Range Percent Splice Strand
CG32695-RA 26..263 17..254 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:16:46 Download gff for BS16114.complete
Subject Subject Range Query Range Percent Splice Strand
X 9873728..9873964 17..254 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:42:48 Download gff for BS16114.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9767761..9767997 17..254 98   Minus

BS16114.pep Sequence

Translation from 16 to 255

> BS16114.pep
MRSVLPSVGFLLLLALLLGSSCTESGRVIYFNQLNTTQALEAAKNNSDAL
GKGMLLDVRGNRCPRGFVRDHHGRCRRRV*

BS16114.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:38:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG32695-PC 79 CG32695-PC 1..79 1..79 407 100 Plus
CG32695-PB 79 CG32695-PB 1..79 1..79 407 100 Plus
CG32695-PA 79 CG32695-PA 1..79 1..79 407 100 Plus