Clone Sequence Records
BS16114.5prime Sequence
270 bp (270 high quality bases) assembled on 2007-04-16
> BS16114.5prime
GAAGTTATCCCTCGACATGCGATCTGTACTGCCGTCGGTGGGATTTCTGC
TGCTCCTGGCTCTGCTGCTCGGCTCCTCGTGCACTGAATCCGGCAGGGTG
ATCTACTTCAATCAACTGAACACCACCCAAGCCCTAGAGGCGGCCAAAAA
CAACAGCGATGCCCTGGGCAAGGGAATGCTCCTTGATGTGCGCGGAAATC
GCTGCCCACGCGGATTCGTTCGCGATCATCATGGGCGTTGCAGAAGGCGT
GTCTAAAAGCTTTCTAGACC
BS16114.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:42:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32695-PA | 240 | CG32695-RA | 1..240 | 17..256 | 1200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32695-RC | 1613 | CG32695-RC | 90..335 | 13..258 | 1215 | 99.6 | Plus |
CG32695-RB | 512 | CG32695-RB | 22..267 | 13..258 | 1215 | 99.6 | Plus |
CG32695-RA | 385 | CG32695-RA | 22..267 | 13..258 | 1215 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:59:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9873734..9873968 | 247..13 | 1160 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:59:41 has no hits.
BS16114.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:02:15 Download gff for
BS16114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-PA | 1..240 | 17..256 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:49:46 Download gff for
BS16114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 22..269 | 13..261 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:59:16 Download gff for
BS16114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 22..269 | 13..261 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:59:16 Download gff for
BS16114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9873731..9873968 | 13..251 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:49:46 Download gff for
BS16114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9767764..9768001 | 13..251 | 99 | | Minus |
BS16114.3prime Sequence
270 bp (270 high quality bases) assembled on 2007-04-16
> BS16114.3prime
ATGGTCTAGAAAGCTTTTAGACACGCCTTCTGCAACGCCCATGATGATCG
CGAACGAATCCGCGTGGGCAGCGATTTCCGCGCACATCAAGGAGCATTCC
CTTGCCCAGGGCATCGCTGTTGTTTTTGGCCGCCTCTAGGGCTTGGGTGG
TGTTCAGTTGATTGAAGTAGATCACCCTGCCGGATTCAGTGCACGAGGAG
CCGAGCAGCAGAGCCAGGAGCAGCAGAAATCCCACCGACGGCAGTACAGA
TCGCATGTCGACTGATAACT
BS16114.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:42:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32695-PA | 240 | CG32695-RA | 1..240 | 256..17 | 1200 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:40:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32695-RC | 1613 | CG32695-RC | 90..335 | 260..15 | 1215 | 99.6 | Minus |
CG32695-RB | 512 | CG32695-RB | 22..267 | 260..15 | 1215 | 99.6 | Minus |
CG32695-RA | 385 | CG32695-RA | 22..267 | 260..15 | 1215 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:40:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9873734..9873968 | 26..260 | 1160 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:40:05 has no hits.
BS16114.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:02:14 Download gff for
BS16114.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-PA | 1..240 | 17..256 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:11:43 Download gff for
BS16114.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 22..269 | 12..260 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:12:48 Download gff for
BS16114.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 22..269 | 12..260 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:12:48 Download gff for
BS16114.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9873731..9873968 | 22..260 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:11:43 Download gff for
BS16114.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9767764..9768001 | 22..260 | 99 | | Plus |
BS16114.complete Sequence
272 bp assembled on 2007-05-07
GenBank Submission: FJ638064
> BS16114.complete
GAAGTTATCAGTCGACATGCGATCTGTACTGCCGTCGGTGGGATTTCTGC
TGCTCCTGGCTCTGCTGCTCGGCTCCTCGTGCACTGAATCCGGCAGGGTG
ATCTACTTCAATCAACTGAACACCACCCAAGCCCTAGAGGCGGCCAAAAA
CAACAGCGATGCCCTGGGCAAGGGAATGCTCCTTGATGTGCGCGGAAATC
GCTGCCCACGCGGATTCGTTCGCGATCATCATGGGCGTTGCAGAAGGCGT
GTCTAAAAGCTTTCTAGACCAT
BS16114.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:02:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32695-RC | 240 | CG32695-PC | 1..240 | 17..256 | 1200 | 100 | Plus |
CG32695-RB | 240 | CG32695-PB | 1..240 | 17..256 | 1200 | 100 | Plus |
CG32695-RA | 240 | CG32695-PA | 1..240 | 17..256 | 1200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32695-RC | 1613 | CG32695-RC | 90..335 | 13..258 | 1215 | 99.6 | Plus |
CG32695-RB | 512 | CG32695-RB | 22..267 | 13..258 | 1215 | 99.6 | Plus |
CG32695-RA | 385 | CG32695-RA | 22..267 | 13..258 | 1215 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9873734..9873968 | 247..13 | 1160 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:02:02 has no hits.
BS16114.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:49:43 Download gff for
BS16114.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 1..240 | 17..256 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:38:08 Download gff for
BS16114.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 22..269 | 13..261 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:42:48 Download gff for
BS16114.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 26..263 | 17..254 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:49:43 Download gff for
BS16114.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 22..269 | 13..261 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:16:46 Download gff for
BS16114.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32695-RA | 26..263 | 17..254 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:16:46 Download gff for
BS16114.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9873728..9873964 | 17..254 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:42:48 Download gff for
BS16114.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9767761..9767997 | 17..254 | 98 | | Minus |
BS16114.pep Sequence
Translation from 16 to 255
> BS16114.pep
MRSVLPSVGFLLLLALLLGSSCTESGRVIYFNQLNTTQALEAAKNNSDAL
GKGMLLDVRGNRCPRGFVRDHHGRCRRRV*
BS16114.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:38:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32695-PC | 79 | CG32695-PC | 1..79 | 1..79 | 407 | 100 | Plus |
CG32695-PB | 79 | CG32695-PB | 1..79 | 1..79 | 407 | 100 | Plus |
CG32695-PA | 79 | CG32695-PA | 1..79 | 1..79 | 407 | 100 | Plus |