Clone BS16192 Report

Search the DGRC for BS16192

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:161
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptDesi-RA
Protein status:BS16192.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16192.3prime Sequence

816 bp (761 high quality bases) assembled on 2007-04-16

> BS16192.3prime
ATGGTCTAGAAAGCTTCTAAACCTTCTTTTCTCGGGAAATTCCAGATGAT
TTTCCTTTTCCTTGTGGGTTTTTCTTTGGCATCAGCTTCATTAGAATATC
CGTAGCTGATTTACTGTCCAGCGGACAATTGGAGTACACCTCTTCACAGG
CTCGATCATTGGCTCGCTTTCCATGCTCCAATGCCTCCTTAATAGCCGTT
CCATCGAGGAGGTAATCCACCAGGGCATTTTCCGCTAGCATATGAATAAA
TTCGTCCATCTGGTCTGAGGAACCGATCTTCATATTATACTCCGTAGAGC
GAACATAACCGCACACAGCACGTTGCATGCAACTCGTCGAGTCAATATTA
TTCTGGCCCAGAACATCGTCAATCTTATTGATCATGCTGCTCAGTGGTGT
TAGGTCACTGTCCTCGCTGCGGCCGTAGCCTCCATAACCACCATGGAAGG
CGGATAGAATCTTAGGAATCAGTATAATGGCACCTATGCCCACAAGAGTT
CCTAAGACAACGCCACCCAGGTCCAGTTTTATGGGATTGTAGGCGGATAG
TCCAGTACCGCCAGGATAACCATTTAGGGATCCGTAGCCAGTGGTATAGC
CCAGTCGTTCCAGTCTATCCTTCGTGGAAGCTGTCTGCGGTTCACTAGGC
TGGGTCTTGTTTTCATTAAAGTACGACCTATCCCGCTGCGCCTTATCCGC
ATAGAACTTATGGCTATCTTCGTATTTGGGGATTGCACTGGCGTAGGTCA
GCACAACCAACACTCCCAGCAGCTGCAGTATGACAATGTAATTTCGGTTC
ATGTCGACTGATAACT

BS16192.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:56:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14686-PA 786 CG14686-RA 1..786 802..17 3930 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-RA 1005 CG14686-RA 124..909 802..17 3930 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:35:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10780516..10780729 230..17 1070 100 Minus
3R 32079331 3R 10780261..10780447 417..231 935 100 Minus
3R 32079331 3R 10780049..10780207 571..413 780 99.4 Minus
3R 32079331 3R 10779838..10779974 707..571 685 100 Minus
3R 32079331 3R 10779692..10779788 802..706 485 100 Minus
Blast to na_te.dros performed on 2015-02-13 06:35:16 has no hits.

BS16192.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:02:57 Download gff for BS16192.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14686-PA 1..786 17..802 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:50:44 Download gff for BS16192.3prime
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 118..911 11..809 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:09:45 Download gff for BS16192.3prime
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 118..911 11..809 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:09:45 Download gff for BS16192.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10779686..10779786 708..809 97 -> Minus
3R 10779838..10779973 572..707 100 -> Minus
3R 10780049..10780202 418..571 100 -> Minus
3R 10780261..10780447 231..417 100 -> Minus
3R 10780516..10780731 11..230 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:50:44 Download gff for BS16192.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6605408..6605508 708..809 97 -> Minus
arm_3R 6605560..6605695 572..707 100 -> Minus
arm_3R 6605771..6605924 418..571 100 -> Minus
arm_3R 6605983..6606169 231..417 100 -> Minus
arm_3R 6606238..6606453 11..230 98   Minus

BS16192.5prime Sequence

816 bp (762 high quality bases) assembled on 2007-04-16

> BS16192.5prime
GAAGTTATCAGTCGACATGAACCGAAATTACATTGTCATACTGCAGCTGC
TGGGAGTGTTGGTTGTGCTGACCTACGCCAGTGCAATCCCCAAATACGAA
GATAGCCATAAGTTCTATGCGGATAAGGCGCAGCGGGATAGGTCGTACTT
TAATGAAAACAAGACCCAGCCTAGTGAACCGCAGACAGCTTCCACGAAGG
ATAGACTGGAACGACTGGGCTATACCACTGGCTACGGATCCCTAAATGGT
TATCCTGGCGGTACTGGACTATCCGCCTACAATCCCATAAAACTGGACCT
GGGTGGCGTTGTCTTAGGAACTCTTGTGGGCATAGGTGCCATTATACTGA
TTCCTAAGATTCTATCCGCCTTCCATGGTGGTTATGGAGGCTACGGCCGC
AGCGAGGACAGTGACCTAACACCACTGAGCAGCATGATCAATAAGATTGA
CGATGTTCTGGGCCAGAATAATATTGACTCGACGAGTTGCATGCAACGTG
CTGTGTGCGGTTATGTTCGCTCTACGGAGTATAATATGAAGATCGGTTCC
TCAGACCAGATGGACGAATTTATTCATATGCTAGCGGAAAATGCCCTGGT
GGATTACCTCCTCGATGGAACGGCTATTAAGGAGGCATTGGAGCATGGAA
AGCGAGCCAATGATCGAGCCTGTGAAGAGGTGTACTCCAATTGTCCGCTG
GACAGTAAATCAGCTACGGATATTCTAATGAAGCTGATGCCAAAGAAAAA
CCCACAAGGAAAAGGAAAATCATCTGGAATTTCCCGAGAAAAGAANGTTT
AGAAGCTTTCTAGAAC

BS16192.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14686-PA 786 CG14686-RA 1..786 17..802 3911 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:11:21
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-RA 1005 CG14686-RA 124..909 17..802 3919 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:11:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10780516..10780729 589..802 1059 99.5 Plus
3R 32079331 3R 10780261..10780447 402..588 935 100 Plus
3R 32079331 3R 10780049..10780207 248..406 780 99.4 Plus
3R 32079331 3R 10779838..10779974 112..248 685 100 Plus
3R 32079331 3R 10779692..10779788 17..113 485 100 Plus
Blast to na_te.dros performed on 2015-02-11 19:11:20 has no hits.

BS16192.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 14:02:58 Download gff for BS16192.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14686-PA 1..786 17..802 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-27 05:12:26 Download gff for BS16192.5prime
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 118..911 10..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:09:21 Download gff for BS16192.5prime
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 118..911 10..808 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:09:21 Download gff for BS16192.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10780516..10780731 589..808 97   Plus
3R 10780049..10780202 248..401 100 -> Plus
3R 10780261..10780447 402..588 100 -> Plus
3R 10779686..10779786 10..111 97 -> Plus
3R 10779838..10779973 112..247 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-27 05:12:26 Download gff for BS16192.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6605408..6605508 10..111 97 -> Plus
arm_3R 6605560..6605695 112..247 100 -> Plus
arm_3R 6605771..6605924 248..401 100 -> Plus
arm_3R 6605983..6606169 402..588 100 -> Plus
arm_3R 6606238..6606453 589..808 97   Plus

BS16192.complete Sequence

818 bp assembled on 2007-05-07

GenBank Submission: FJ638085

> BS16192.complete
GAAGTTATCAGTCGACATGAACCGAAATTACATTGTCATACTGCAGCTGC
TGGGAGTGTTGGTTGTGCTGACCTACGCCAGTGCAATCCCCAAATACGAA
GATAGCCATAAGTTCTATGCGGATAAGGCGCAGCGGGATAGGTCGTACTT
TAATGAAAACAAGACCCAGCCTAGTGAACCGCAGACAGCTTCCACGAAGG
ATAGACTGGAACGACTGGGCTATACCACTGGCTACGGATCCCTAAATGGT
TATCCTGGCGGTACTGGACTATCCGCCTACAATCCCATAAAACTGGACCT
GGGTGGCGTTGTCTTAGGAACTCTTGTGGGCATAGGTGCCATTATACTGA
TTCCTAAGATTCTATCCGCCTTCCATGGTGGTTATGGAGGCTACGGCCGC
AGCGAGGACAGTGACCTAACACCACTGAGCAGCATGATCAATAAGATTGA
CGATGTTCTGGGCCAGAATAATATTGACTCGACGAGTTGCATGCAACGTG
CTGTGTGCGGTTATGTTCGCTCTACGGAGTATAATATGAAGATCGGTTCC
TCAGACCAGATGGACGAATTTATTCATATGCTAGCGGAAAATGCCCTGGT
GGATTACCTCCTCGATGGAACGGCTATTAAGGAGGCATTGGAGCATGGAA
AGCGAGCCAATGATCGAGCCTGTGAAGAGGTGTACTCCAATTGTCCGCTG
GACAGTAAATCAGCTACGGATATTCTAATGAAGCTGATGCCAAAGAAAAA
CCCACAAGGAAAAGGAAAATCATCTGGAATTTCCCGAGAAAAGAAGGTTT
AGAAGCTTTCTAGACCAT

BS16192.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-RA 786 CG14686-PA 1..786 17..802 3930 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-RA 1005 CG14686-RA 124..909 17..802 3930 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10780516..10780729 589..802 1070 100 Plus
3R 32079331 3R 10780261..10780447 402..588 935 100 Plus
3R 32079331 3R 10780049..10780207 248..406 780 99.4 Plus
3R 32079331 3R 10779838..10779974 112..248 685 100 Plus
3R 32079331 3R 10779692..10779788 17..113 485 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:03:03 has no hits.

BS16192.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:19:52 Download gff for BS16192.complete
Subject Subject Range Query Range Percent Splice Strand
CG14686-RA 1..786 17..802 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:00:57 Download gff for BS16192.complete
Subject Subject Range Query Range Percent Splice Strand
CG14686-RA 112..905 10..808 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:48:08 Download gff for BS16192.complete
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 124..909 17..802 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:19:52 Download gff for BS16192.complete
Subject Subject Range Query Range Percent Splice Strand
CG14686-RA 112..905 10..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:09:57 Download gff for BS16192.complete
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 124..909 17..802 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:09:57 Download gff for BS16192.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10779692..10779786 17..111 100 -> Plus
3R 10779838..10779973 112..247 100 -> Plus
3R 10780049..10780202 248..401 100 -> Plus
3R 10780261..10780447 402..588 100 -> Plus
3R 10780516..10780729 589..802 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:48:08 Download gff for BS16192.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6605414..6605508 17..111 100 -> Plus
arm_3R 6605560..6605695 112..247 100 -> Plus
arm_3R 6605771..6605924 248..401 100 -> Plus
arm_3R 6605983..6606169 402..588 100 -> Plus
arm_3R 6606238..6606451 589..802 100   Plus

BS16192.pep Sequence

Translation from 16 to 801

> BS16192.pep
MNRNYIVILQLLGVLVVLTYASAIPKYEDSHKFYADKAQRDRSYFNENKT
QPSEPQTASTKDRLERLGYTTGYGSLNGYPGGTGLSAYNPIKLDLGGVVL
GTLVGIGAIILIPKILSAFHGGYGGYGRSEDSDLTPLSSMINKIDDVLGQ
NNIDSTSCMQRAVCGYVRSTEYNMKIGSSDQMDEFIHMLAENALVDYLLD
GTAIKEALEHGKRANDRACEEVYSNCPLDSKSATDILMKLMPKKNPQGKG
KSSGISREKKV*

BS16192.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:52:19
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-PA 261 CG14686-PA 1..261 1..261 1349 100 Plus