Clone BS16205 Report

Search the DGRC for BS16205

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:162
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCG11790-RB
Protein status:BS16205.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16205.3prime Sequence

768 bp (768 high quality bases) assembled on 2007-05-15

> BS16205.3prime
ATGGTCTAGAAAGCTTTTATTTCGACTTATTTTTTGTTTTCGCAGGCTCT
GAACTGAATATTTTGGCAACCTTTTTGCCAACGAATAAGAGAGCAACTAA
GGCGAAAATACTCAAAGTCGCCAGCGATGTTATGTTTTCAGCTGCAAAAT
AACTTTGCAGTGGGCCCAAAAATTCGTTTACGGCACTTGGGATTGCGGGC
ACTGGTTGAGGATGGCTCTGGGTATATCCCTTCTCAGCAAACTGGACAAA
GGCTTCGGGACTGTATTGCTTGGCTGAATATTTGTACATCTTTCCTTGCC
TCAAGAAAATAAAAGCCGGTGCTTCCAATACTCCCAGTCGCGTAGCAGTT
GAGATTCCAGACTCCAAACTGTTCATGCGGGCAATATTCAGCTTTCGCTT
TAGCTTTCCGCCCACAGACTCCCAAACGGCATAGAGTCGCTGACAGACGG
TACATTCGGCCGAAGAGAAGAAGATAAACCAGTCCCCGGTAGTGGCACCC
GACGAGGCTTGAGTCAGGTGCTCGAAGTTGTCGTCGGAAAGCTCTTTGAC
CGCCGGCTCTAAGTTGTCATTGAAGAAGTCTAGGATTTCGTCATCGTTGA
TCTCGCCATGGTATAGAATGGGTATTCCTCGCCTGAAGAACACCAAAGCG
GGCTCCTTGCTGGGGTCATAGATGGATACCAGGTTGCTGTCCACCGACTG
GACCACAATGGCCGACAAGGTCTCCTCCAGCTGGGCACGTATCTTGGTCA
CCATGTCGACTGATAACT

BS16205.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG11790-PA 909 CG11790-RA 170..909 756..17 3675 99.8 Minus
CG11790-PB 738 CG11790-RB 1..738 754..17 3665 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11790-RB 1116 CG11790-RB 356..1097 756..15 3695 99.9 Minus
CG11790-RA 1010 CG11790-RA 250..991 756..15 3695 99.9 Minus
CG11790-RC 1040 CG11790-RC 250..826 756..180 2870 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25048061..25048349 756..468 1430 99.7 Minus
3R 32079331 3R 25049272..25049436 179..15 825 100 Minus
3R 32079331 3R 25048442..25048603 467..306 810 100 Minus
3R 32079331 3R 25048665..25048790 305..180 630 100 Minus
Blast to na_te.dros performed on 2015-02-12 05:35:51 has no hits.

BS16205.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:23:42 Download gff for BS16205.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11790-PA 163..909 17..765 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:44:27 Download gff for BS16205.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11790-RA 243..997 7..765 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:38:30 Download gff for BS16205.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11790-RA 243..997 7..765 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:38:30 Download gff for BS16205.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25048054..25048349 468..765 98 -> Minus
3R 25048442..25048603 306..467 100 -> Minus
3R 25048665..25048790 180..305 100 -> Minus
3R 25049272..25049442 7..179 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:44:27 Download gff for BS16205.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20874994..20875164 7..179 97   Minus
arm_3R 20873776..20874071 468..765 98 -> Minus
arm_3R 20874164..20874325 306..467 100 -> Minus
arm_3R 20874387..20874512 180..305 100 -> Minus

BS16205.5prime Sequence

768 bp (768 high quality bases) assembled on 2007-05-15

> BS16205.5prime
GAAGTTATCAGTCGACATGGTGACCAAGATACGTGCCCAGCTGGAGGAGA
CCTTGTCGGCCATTGTGGTCCAGTCGGTGGACAGCAACCTGGTATCCATC
TATGACCCCAGCAAGGAGCCCGCTTTGGTGTTCTTCAGGCGAGGAATACC
CATTCTATACCATGGCGAGATCAACGATGACGAAATCCTAGACTTCTTCA
ATGACAACTTAGAGCCGGCGGTCAAAGAGCTTTCCGACGACAACTTCGAG
CACCTGACTCAAGCCTCGTCGGGTGCCACTACCGGGGACTGGTTTATCTT
CTTCTCTTCGGCCGAATGTACCGTCTGTCAGCGACTCTATGCCGTTTGGG
AGTCTGTGGGCGGAAAGCTAAAGCGAAAGCTGAATATTGCCCGCATGAAC
AGTTTGGAGTCTGGAATCTCAACTGCTACGCGACTGGGAGTATTGGAAGC
ACCGGCTTTTATTTTCTTGAGGCAAGGAAAGATGTACAAATATTCAGCCA
AGCAATACAGTCCCGAAGCCTTTGTCCAGTTTGCTGAGAAGGGATATACC
CAGAGCCATCCTCAACCAGTGCCCGCAATCCCAAGTGCCGTAAACGAATT
TTTGGGCCCACTGCAAAGTTATTTTGCAGCTGAAAACATAACATCGCTGG
CGACTTTGAGTATTTTCGCCTTAGTTGCTCTCTTATTCGTTGGCAAAAAG
GTTGCCAAAATATTCAGTTCAGAGCCTGCGAAAACAAAAAATAAGTCGAA
ATAAAAGCTTTCTAGACC

BS16205.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:18:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11790-PA 909 CG11790-RA 170..909 15..754 3675 99.8 Plus
CG11790-PB 738 CG11790-RB 1..738 17..754 3665 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:57:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11790-RB 1116 CG11790-RB 356..1097 15..756 3695 99.9 Plus
CG11790-RA 1010 CG11790-RA 250..991 15..756 3695 99.9 Plus
CG11790-RC 1040 CG11790-RC 250..826 15..591 2870 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25048061..25048349 15..303 1430 99.7 Plus
3R 32079331 3R 25049272..25049436 592..756 825 100 Plus
3R 32079331 3R 25048442..25048603 304..465 810 100 Plus
3R 32079331 3R 25048665..25048790 466..591 630 100 Plus
Blast to na_te.dros performed on 2015-02-11 23:57:49 has no hits.

BS16205.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:18:29 Download gff for BS16205.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11790-PA 163..909 6..754 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:31:06 Download gff for BS16205.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11790-RA 243..997 6..764 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:54 Download gff for BS16205.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11790-RA 243..997 6..764 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:54 Download gff for BS16205.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25048442..25048603 304..465 100 -> Plus
3R 25048665..25048790 466..591 100 -> Plus
3R 25049272..25049442 592..764 97   Plus
3R 25048054..25048349 6..303 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:31:06 Download gff for BS16205.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20873776..20874071 6..303 98 -> Plus
arm_3R 20874164..20874325 304..465 100 -> Plus
arm_3R 20874387..20874512 466..591 100 -> Plus
arm_3R 20874994..20875164 592..764 97   Plus

BS16205.complete Sequence

770 bp assembled on 2007-05-07

GenBank Submission: FJ638089

> BS16205.complete
GAAGTTATCAGTCGACATGGTGACCAAGATACGTGCCCAGCTGGAGGAGA
CCTTGTCGGCCATTGTGGTCCAGTCGGTGGACAGCAACCTGGTATCCATC
TATGACCCCAGCAAGGAGCCCGCTTTGGTGTTCTTCAGGCGAGGAATACC
CATTCTATACCATGGCGAGATCAACGATGACGAAATCCTAGACTTCTTCA
ATGACAACTTAGAGCCGGCGGTCAAAGAGCTTTCCGACGACAACTTCGAG
CACCTGACTCAAGCCTCGTCGGGTGCCACTACCGGGGACTGGTTTATCTT
CTTCTCTTCGGCCGAATGTACCGTCTGTCAGCGACTCTATGCCGTTTGGG
AGTCTGTGGGCGGAAAGCTAAAGCGAAAGCTGAATATTGCCCGCATGAAC
AGTTTGGAGTCTGGAATCTCAACTGCTACGCGACTGGGAGTATTGGAAGC
ACCGGCTTTTATTTTCTTGAGGCAAGGAAAGATGTACAAATATTCAGCCA
AGCAATACAGTCCCGAAGCCTTTGTCCAGTTTGCTGAGAAGGGATATACC
CAGAGCCATCCTCAACCAGTGCCCGCAATCCCAAGTGCCGTAAACGAATT
TTTGGGCCCACTGCAAAGTTATTTTGCAGCTGAAAACATAACATCGCTGG
CGACTTTGAGTATTTTCGCCTTAGTTGCTCTCTTATTCGTTGGCAAAAAG
GTTGCCAAAATATTCAGTTCAGAGCCTGCGAAAACAAAAAATAAGTCGAA
ATAAAAGCTTTCTAGACCAT

BS16205.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG11790-RA 909 CG11790-PA 170..909 15..754 3685 99.9 Plus
CG11790-RB 738 CG11790-PB 1..738 17..754 3675 99.9 Plus
CG11790-RC 756 CG11790-PC 170..746 15..591 2870 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG11790-RB 1116 CG11790-RB 356..1097 15..756 3695 99.9 Plus
CG11790-RA 1010 CG11790-RA 250..991 15..756 3695 99.9 Plus
CG11790-RC 1040 CG11790-RC 250..826 15..591 2870 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:23:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25048061..25048349 15..303 1430 99.7 Plus
3R 32079331 3R 25049272..25049436 592..756 825 100 Plus
3R 32079331 3R 25048442..25048603 304..465 810 100 Plus
3R 32079331 3R 25048665..25048790 466..591 630 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:23:32 has no hits.

BS16205.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:16:55 Download gff for BS16205.complete
Subject Subject Range Query Range Percent Splice Strand
CG11790-RA 163..909 6..754 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:57:29 Download gff for BS16205.complete
Subject Subject Range Query Range Percent Splice Strand
CG11790-RB 355..1109 6..764 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:48:28 Download gff for BS16205.complete
Subject Subject Range Query Range Percent Splice Strand
CG11790-RA 252..987 17..752 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:16:55 Download gff for BS16205.complete
Subject Subject Range Query Range Percent Splice Strand
CG11790-RB 355..1109 6..764 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:54 Download gff for BS16205.complete
Subject Subject Range Query Range Percent Splice Strand
CG11790-RA 252..987 17..752 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:54 Download gff for BS16205.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25048063..25048349 17..303 99 -> Plus
3R 25048442..25048603 304..465 100 -> Plus
3R 25048665..25048790 466..591 100 -> Plus
3R 25049272..25049432 592..752 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:48:28 Download gff for BS16205.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20874387..20874512 466..591 100 -> Plus
arm_3R 20874994..20875154 592..752 100   Plus
arm_3R 20873785..20874071 17..303 99 -> Plus
arm_3R 20874164..20874325 304..465 100 -> Plus

BS16205.pep Sequence

Translation from 16 to 753

> BS16205.pep
MVTKIRAQLEETLSAIVVQSVDSNLVSIYDPSKEPALVFFRRGIPILYHG
EINDDEILDFFNDNLEPAVKELSDDNFEHLTQASSGATTGDWFIFFSSAE
CTVCQRLYAVWESVGGKLKRKLNIARMNSLESGISTATRLGVLEAPAFIF
LRQGKMYKYSAKQYSPEAFVQFAEKGYTQSHPQPVPAIPSAVNEFLGPLQ
SYFAAENITSLATLSIFALVALLFVGKKVAKIFSSEPAKTKNKSK*

BS16205.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11790-PB 245 CG11790-PB 1..245 1..245 1239 100 Plus
CG11790-PA 302 CG11790-PA 58..302 1..245 1239 100 Plus
CG11790-PC 251 CG11790-PC 58..250 1..193 985 99.5 Plus