Clone Sequence Records
BS16206.3prime Sequence
252 bp (252 high quality bases) assembled on 2007-05-15
> BS16206.3prime
ATGGTCTAGAAAGCTTCTATAGAAACGTTAAGCAGCGGCAGTAGCAGCAA
CAAGAACAACAGCAGCAACAACAACTACTACAACGAACAGAGACGACGTC
GAAGGAAAGATTTTTACTCGCGTCGCGGTATACTTCAACTGTTTTTGAAC
TTTTATTGCGTGTTTGCTGCTGCGACAAAACTTGCGCGGCGCCACAAAGC
GGAGAAAACGTTGACCGCGTGTGTGTGGCGGAGAGCATGTCGACTGATAA
CT
BS16206.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:23:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32711-PA | 222 | CG32711-RA | 1..222 | 238..17 | 1110 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:05:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lawc-RA | 1072 | CG32711-RA | 124..346 | 239..17 | 1115 | 100 | Minus |
lawc-RB | 1332 | CG32711-RB | 124..346 | 239..17 | 1115 | 100 | Minus |
lawc-RD | 1870 | CG32711-RD | 124..346 | 239..17 | 1115 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:05:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8409753..8409975 | 17..239 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:05:02 has no hits.
BS16206.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:23:51 Download gff for
BS16206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-PA | 1..222 | 17..238 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:57:11 Download gff for
BS16206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 120..353 | 9..245 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:24:22 Download gff for
BS16206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 120..353 | 9..245 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:24:22 Download gff for
BS16206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8409746..8409979 | 9..245 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:57:11 Download gff for
BS16206.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8303779..8304012 | 9..245 | 97 | | Plus |
BS16206.5prime Sequence
252 bp (252 high quality bases) assembled on 2007-05-15
> BS16206.5prime
GAAGTTATCAGTCGACATGCTCTCCGCCACACACACGCGGTCAACGTTTT
CTCCGCTTTGTGGCGCCGCGCAAGTTTTGTCGCAGCAGCAAACACGCAAT
AAAAGTTCAAAAACAGTTGAAGTATACCGCGACGCGAGTAAAAATCTTTC
CTTCGACGTCGTCTCTGTTCGTTGTAGTAGTTGTTGTTGCTGCTGTTGTT
CTTGTTGCTGCTACTGCCGCTGCTTAACGTTTCTATAGAAGCTTTCTAGA
CC
BS16206.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:18:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32711-PA | 222 | CG32711-RA | 1..222 | 17..238 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:01:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lawc-RA | 1072 | CG32711-RA | 124..346 | 16..238 | 1115 | 100 | Plus |
lawc-RB | 1332 | CG32711-RB | 124..346 | 16..238 | 1115 | 100 | Plus |
lawc-RD | 1870 | CG32711-RD | 124..346 | 16..238 | 1115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:01:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8409753..8409975 | 238..16 | 1115 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:01:35 has no hits.
BS16206.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:18:38 Download gff for
BS16206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-PA | 1..222 | 17..238 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 02:35:54 Download gff for
BS16206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 120..353 | 10..246 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:27:06 Download gff for
BS16206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 120..353 | 10..246 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:27:06 Download gff for
BS16206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8409746..8409979 | 10..246 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 02:35:54 Download gff for
BS16206.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8303779..8304012 | 10..246 | 97 | | Minus |
BS16206.complete Sequence
254 bp assembled on 2007-05-07
GenBank Submission: FJ638090
> BS16206.complete
GAAGTTATCAGTCGACATGCTCTCCGCCACACACACGCGGTCAACGTTTT
CTCCGCTTTGTGGCGCCGCGCAAGTTTTGTCGCAGCAGCAAACACGCAAT
AAAAGTTCAAAAACAGTTGAAGTATACCGCGACGCGAGTAAAAATCTTTC
CTTCGACGTCGTCTCTGTTCGTTGTAGTAGTTGTTGTTGCTGCTGTTGTT
CTTGTTGCTGCTACTGCCGCTGCTTAACGTTTCTATAGAAGCTTTCTAGA
CCAT
BS16206.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:00:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lawc-RA | 222 | CG32711-PA | 1..222 | 17..238 | 1110 | 100 | Plus |
lawc-RB | 222 | CG32711-PB | 1..222 | 17..238 | 1110 | 100 | Plus |
lawc-RD | 222 | CG32711-PD | 1..222 | 17..238 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lawc-RA | 1072 | CG32711-RA | 124..346 | 16..238 | 1115 | 100 | Plus |
lawc-RB | 1332 | CG32711-RB | 124..346 | 16..238 | 1115 | 100 | Plus |
lawc-RD | 1870 | CG32711-RD | 124..346 | 16..238 | 1115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8409753..8409975 | 238..16 | 1115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:00:46 has no hits.
BS16206.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:12:15 Download gff for
BS16206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RA | 1..222 | 17..238 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:13:37 Download gff for
BS16206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RA | 117..350 | 10..246 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:37 Download gff for
BS16206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 125..346 | 17..238 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 14:12:16 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:15 Download gff for
BS16206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 125..346 | 17..238 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:15 Download gff for
BS16206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8409753..8409974 | 17..238 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:37 Download gff for
BS16206.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8303786..8304007 | 17..238 | 100 | | Minus |
BS16206.pep Sequence
Translation from 16 to 237
> BS16206.pep
MLSATHTRSTFSPLCGAAQVLSQQQTRNKSSKTVEVYRDASKNLSFDVVS
VRCSSCCCCCCSCCCYCRCLTFL*
BS16206.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:32:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lawc-PA | 73 | CG32711-PA | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PB | 73 | CG32711-PB | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PD | 73 | CG32711-PD | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PC | 73 | CG32711-PC | 1..73 | 1..73 | 406 | 100 | Plus |