Clone BS16207 Report

Search the DGRC for BS16207

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:162
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG4019-RA
Protein status:BS16207.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16207.3prime Sequence

780 bp (780 high quality bases) assembled on 2007-05-15

> BS16207.3prime
ATGGTCTAGAAAGCTTTTACGACAGCTGGACGTCCTCCAGTTGCCGCAGC
TTCTCATTGGAGGTGATCTCCGCCTCAACCACCTCGCGGCGGAAGACGAC
CTTGTAGGCGTAGGCGGTGATGGCGGAGGAGCTCAGCGGGGCCAGCCAGT
AGATCCAGTTGCTCTCGAAGTGCTTGTTCCACAGGGCGGGGGCGAACGAC
CTGGCCGGGTTCATGCTGCCGCCGGTGAAGGGACCGGCAGCGCAGGCGAG
ACAGGCGATGGCCAGGCCAAATCGAATGCCCACGGAGTCATGGAACTTGG
AGTTGCGCGGATCCCACACTCCGCAGCAGACGATGACCAGGATGGAGGTG
ATTACGAACTCGATGCCGAGGGCCTGGCCCGTGGTTACGCTGGTGTGGGG
CAAGGTCACGCAGAGCCCAGCGCCCACCGTAAGTGTGGGCGAGGGAAGCA
GGACCATGAGCAGGCCGTAGCCGATGAAGGCGCCCAGCATCTGGGCGGCG
AAGTAGGCAAATGCCATGCGCAGGGTGACCATCTCGTAGATGTAGGCGGC
CACGGTCACGGCGGGATTCAGATGGGCACCGGAGACGCAGCCAAAGCACT
GGATGGCGATGAGGACGGCGAAGCCGAAGTTCAGCACAATCTGCAGATGG
TTGTTGGGAAAGAGGTCCGTCTTCACGCAACCCATGCAGCCCAGGAAGAC
CAGGATGCCGGTGCCGATGAGCTCGCCGAGGAAGGCGGAGATTTTGTCCA
GCGTCGATCCCTTCATGTCGACTGATAACT

BS16207.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-PA 750 CG4019-RA 1..750 766..17 3750 100 Minus
CG4019-PD 750 CG4019-RD 1..750 766..17 3750 100 Minus
CG4019-PB 750 CG4019-RB 1..750 766..17 3750 100 Minus
CG4019-PC 786 CG4019-RC 37..786 766..17 3750 100 Minus
CG17664-PA 798 CG17664-RA 307..344 496..459 140 94.7 Minus
CG17664-PB 798 CG17664-RB 307..344 496..459 140 94.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-RF 1271 CG4019-RF 281..1030 766..17 3750 100 Minus
CG4019-RE 1183 CG4019-RE 193..942 766..17 3750 100 Minus
CG4019-RC 1138 CG4019-RC 148..897 766..17 3750 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23608131..23608662 235..766 2660 100 Plus
2R 25286936 2R 23607833..23608051 17..235 1095 100 Plus
2R 25286936 2R 23604625..23604800 459..634 400 81.8 Plus
2R 25286936 2R 23606358..23606443 544..629 205 82.6 Plus
Blast to na_te.dros performed on 2015-02-13 06:57:05 has no hits.

BS16207.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:20:37 Download gff for BS16207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4019-PC 29..786 17..775 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:24:56 Download gff for BS16207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 140..900 13..775 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:23:58 Download gff for BS16207.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 140..900 13..775 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:23:58 Download gff for BS16207.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23607830..23608051 13..235 99 <- Plus
2R 23608132..23608670 236..775 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:24:56 Download gff for BS16207.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19495353..19495574 13..235 99 <- Plus
arm_2R 19495655..19496193 236..775 99   Plus

BS16207.5prime Sequence

780 bp (762 high quality bases) assembled on 2007-05-15

> BS16207.5prime
GAAGTTATCAGTCGACATGAAGGGATCGACGCTGGACAAAATCTCCGCCT
TCCTCGGCGAGCTCATCGGCACCGGCATCCTGGTCTTCCTGGGCTGCATG
GGTTGCGTGAAGACGGACCTCTTTCCCAACAACCATCTGCAGATTGTGCT
GAACTTCGGCTTCGCCGTCCTCATCGCCATCCAGTGCTTTGGCTGCGTCT
CCGGTGCCCATCTGAATCCCGCCGTGACCGTGGCCGCCTACATCTACGAG
ATGGTCACCCTGCGCATGGCATTTGCCTACTTCGCCGCCCAGATGCTGGG
CGCCTTCATCGGCTACGGCCTGCTCATGGTCCTGCTTCCCTCGCCCACAC
TTACGGTGGGCGCTGGGCTCTGCGTGACCTTGCCCCACACCAGCGTAACC
ACGGGCCAGGCCCTCGGCATCGAGTTCGTAATCACCTCCATCCTGGTCAT
CGTCTGCTGCGGAGTGTGGGATCCGCGCAACTCCAAGTTCCATGACTCCG
TGGGCATTCGATTTGGCCTGGCCATCGCCTGTCTCGCCTGCGCTGCCGGT
CCCTTCACCGGCGGCAGCATGAACCCGGCCAGGTCGTTCGCCCCCGCCCT
GTGGAACAAGCACTTCGAGAGCAACTGGATCTACTGGCTGGCCCCGCTGA
GCTCCTCCGCCATCACCGCCTACGCCTACAAGGTCGTCTTCCGCCGCGAG
GTGGTTGAGGCGGAGATCACCTCCAATGAGAAGCTGCGGCAACTGGAGGA
CGTCCAGCTGTCGTAAAAGCTTTCTAGACC

BS16207.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-PA 750 CG4019-RA 1..750 17..766 3750 100 Plus
CG4019-PD 750 CG4019-RD 1..750 17..766 3750 100 Plus
CG4019-PB 750 CG4019-RB 1..750 17..766 3750 100 Plus
CG4019-PC 786 CG4019-RC 37..786 17..766 3750 100 Plus
CG17664-PA 798 CG17664-RA 307..344 287..324 140 94.7 Plus
CG17664-PB 798 CG17664-RB 307..344 287..324 140 94.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-RF 1271 CG4019-RF 281..1030 17..766 3750 100 Plus
CG4019-RE 1183 CG4019-RE 193..942 17..766 3750 100 Plus
CG4019-RC 1138 CG4019-RC 148..897 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23608131..23608662 548..17 2660 100 Minus
2R 25286936 2R 23607833..23608051 766..548 1095 100 Minus
2R 25286936 2R 23604625..23604800 324..149 400 81.8 Minus
2R 25286936 2R 23606358..23606443 239..154 205 82.6 Minus
Blast to na_te.dros performed on 2015-02-13 06:54:47 has no hits.

BS16207.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:15:35 Download gff for BS16207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4019-PC 29..786 8..766 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:23:46 Download gff for BS16207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 140..900 8..770 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:15:53 Download gff for BS16207.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 140..900 8..770 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:15:53 Download gff for BS16207.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23607830..23608051 548..770 99 <- Minus
2R 23608132..23608670 8..547 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:23:46 Download gff for BS16207.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19495353..19495574 548..770 99 <- Minus
arm_2R 19495655..19496193 8..547 99   Minus

BS16207.complete Sequence

782 bp assembled on 2007-05-07

GenBank Submission: FJ638091

> BS16207.complete
GAAGTTATCAGTCGACATGAAGGGATCGACGCTGGACAAAATCTCCGCCT
TCCTCGGCGAGCTCATCGGCACCGGCATCCTGGTCTTCCTGGGCTGCATG
GGTTGCGTGAAGACGGACCTCTTTCCCAACAACCATCTGCAGATTGTGCT
GAACTTCGGCTTCGCCGTCCTCATCGCCATCCAGTGCTTTGGCTGCGTCT
CCGGTGCCCATCTGAATCCCGCCGTGACCGTGGCCGCCTACATCTACGAG
ATGGTCACCCTGCGCATGGCATTTGCCTACTTCGCCGCCCAGATGCTGGG
CGCCTTCATCGGCTACGGCCTGCTCATGGTCCTGCTTCCCTCGCCCACAC
TTACGGTGGGCGCTGGGCTCTGCGTGACCTTGCCCCACACCAGCGTAACC
ACGGGCCAGGCCCTCGGCATCGAGTTCGTAATCACCTCCATCCTGGTCAT
CGTCTGCTGCGGAGTGTGGGATCCGCGCAACTCCAAGTTCCATGACTCCG
TGGGCATTCGATTTGGCCTGGCCATCGCCTGTCTCGCCTGCGCTGCCGGT
CCCTTCACCGGCGGCAGCATGAACCCGGCCAGGTCGTTCGCCCCCGCCCT
GTGGAACAAGCACTTCGAGAGCAACTGGATCTACTGGCTGGCCCCGCTGA
GCTCCTCCGCCATCACCGCCTACGCCTACAAGGTCGTCTTCCGCCGCGAG
GTGGTTGAGGCGGAGATCACCTCCAATGAGAAGCTGCGGCAACTGGAGGA
CGTCCAGCTGTCGTAAAAGCTTTCTAGACCAT

BS16207.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:13:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-RF 894 CG4019-PF 145..894 17..766 3750 100 Plus
CG4019-RE 861 CG4019-PE 112..861 17..766 3750 100 Plus
CG4019-RC 786 CG4019-PC 37..786 17..766 3750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-RF 1271 CG4019-RF 281..1030 17..766 3750 100 Plus
CG4019-RE 1183 CG4019-RE 193..942 17..766 3750 100 Plus
CG4019-RC 1138 CG4019-RC 148..897 17..766 3750 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:13:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23608131..23608662 548..17 2660 100 Minus
2R 25286936 2R 23607833..23608051 766..548 1095 100 Minus
2R 25286936 2R 23604625..23604800 324..149 400 81.8 Minus
2R 25286936 2R 23606358..23606443 239..154 205 82.6 Minus
Blast to na_te.dros performed on 2014-11-28 00:13:19 has no hits.

BS16207.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:49:40 Download gff for BS16207.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RB 1..750 17..766 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:38:02 Download gff for BS16207.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RB 90..850 8..770 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:47:49 Download gff for BS16207.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 148..895 17..764 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:49:40 Download gff for BS16207.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RB 90..850 8..770 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:16:31 Download gff for BS16207.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 148..895 17..764 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:16:31 Download gff for BS16207.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23607835..23608051 548..764 100 <- Minus
2R 23608132..23608662 17..547 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:47:49 Download gff for BS16207.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19495358..19495574 548..764 100 <- Minus
arm_2R 19495655..19496185 17..547 100   Minus

BS16207.pep Sequence

Translation from 16 to 765

> BS16207.pep
MKGSTLDKISAFLGELIGTGILVFLGCMGCVKTDLFPNNHLQIVLNFGFA
VLIAIQCFGCVSGAHLNPAVTVAAYIYEMVTLRMAFAYFAAQMLGAFIGY
GLLMVLLPSPTLTVGAGLCVTLPHTSVTTGQALGIEFVITSILVIVCCGV
WDPRNSKFHDSVGIRFGLAIACLACAAGPFTGGSMNPARSFAPALWNKHF
ESNWIYWLAPLSSSAITAYAYKVVFRREVVEAEITSNEKLRQLEDVQLS*

BS16207.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-PB 249 CG4019-PB 1..249 1..249 1295 100 Plus
CG4019-PD 249 CG4019-PD 1..249 1..249 1295 100 Plus
CG4019-PA 249 CG4019-PA 1..249 1..249 1295 100 Plus
CG4019-PC 261 CG4019-PC 13..261 1..249 1295 100 Plus
CG4019-PE 286 CG4019-PE 38..286 1..249 1295 100 Plus