Clone Sequence Records
BS16226.3prime Sequence
726 bp (726 high quality bases) assembled on 2007-05-15
> BS16226.3prime
ATGGTCTAGAAAGCTTCTACAGCTCGTCGTGTTTGGGTCCCGAGAACTCA
TCGTGCGAGATGAAACCGTTCTTATCCTTATCCTCGTGCTGAAAGATCTC
CTCCACCAGCTTGTCGTTCTCAGCCAGCATGTTCTTCAGCTCCTCGGAAT
CCTGTCCCTCCACGGCGGTCATCTGCTTCTTTAGATACTCGCTGACCTCT
TCGCGACTCAGCTGCTTGTCGGCATTATCGTCGATCTCCTTGAACACATT
GGTGGTGGGCGGGGCATTGCCGATGTTGATCAGCTCCACATCGAAGAGGA
GGGTGGCCTTGGGCGGTATCACGTTGCCGGCACCCTGGTCACCATAGCCC
AGCTGGGGAGGAATGGTCAGCTTGCGCTTCTCACCCACGCACATGTTGAG
CAGACCCTGATCCCAACCCTTAATCACCTGGCCGGCGCCCAATTGGAATG
TGAAGGGCTGGTCGCGGTCGAAGCTCGAGTCGAATTTCTTGCCATCGGCC
TGCAGAGTTCCAGTGTAGTGCATGGTGAGGGAATCGCCGTTCTTGGACTT
TTGTTCGCACACCTCCGGCGTGCTGATCACCTCCACTTTCAGATCCTGAG
CCCGGACCAGGCTGTTGCTGATGGCCACCAGCAGAAGGCACGAGATAACG
AGATTGGATTTCGACATGGAGGAACAATGTAATACCGAAATGTATTCCAA
AAAGTTATTCATGTCGACTGATAACT
BS16226.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:21:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9847-PB | 696 | Fkbp13-RB | 1..696 | 712..17 | 3480 | 100 | Minus |
CG9847-PA | 651 | Fkbp13-RA | 1..651 | 667..17 | 3255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:07:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RC | 1301 | CG9847-RC | 107..802 | 712..17 | 3480 | 100 | Minus |
Fkbp14-RF | 1350 | CG9847-RF | 199..851 | 669..17 | 3265 | 100 | Minus |
Fkbp14-RE | 1294 | CG9847-RE | 143..795 | 669..17 | 3265 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:07:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21495131..21495326 | 474..669 | 980 | 100 | Plus |
2R | 25286936 | 2R | 21488017..21488207 | 195..385 | 955 | 100 | Plus |
2R | 25286936 | 2R | 21487666..21487847 | 17..198 | 910 | 100 | Plus |
2R | 25286936 | 2R | 21488271..21488363 | 383..475 | 465 | 100 | Plus |
2R | 25286936 | 2R | 21497781..21497823 | 670..712 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:07:58 has no hits.
BS16226.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:21:25 Download gff for
BS16226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9847-PB | 1..696 | 17..712 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:50:01 Download gff for
BS16226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 107..806 | 12..712 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:07:22 Download gff for
BS16226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 107..806 | 12..712 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:07:22 Download gff for
BS16226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21487662..21487845 | 12..196 | 98 | <- | Plus |
2R | 21488019..21488206 | 197..384 | 100 | <- | Plus |
2R | 21488273..21488361 | 385..473 | 100 | <- | Plus |
2R | 21495131..21495326 | 474..669 | 100 | <- | Plus |
2R | 21497781..21497823 | 670..712 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:50:01 Download gff for
BS16226.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17385286..17385328 | 670..712 | 100 | | Plus |
arm_2R | 17375167..17375350 | 12..196 | 98 | <- | Plus |
arm_2R | 17375524..17375711 | 197..384 | 100 | <- | Plus |
arm_2R | 17375778..17375866 | 385..473 | 100 | <- | Plus |
arm_2R | 17382636..17382831 | 474..669 | 100 | <- | Plus |
BS16226.5prime Sequence
726 bp (726 high quality bases) assembled on 2007-05-15
> BS16226.5prime
GAAGTTATCAGTCGACATGAATAACTTTTTGGAATACATTTCGGTATTAC
ATTGTTCCTCCATGTCGAAATCCAATCTCGTTATCTCGTGCCTTCTGCTG
GTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTGGAGGT
GATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGATTCCC
TCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAATTCGAC
TCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCCGGCCA
GGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGGTGAGA
AGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGGGTGCC
GGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAGCTGAT
CAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGATCGACG
ATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATCTAAAG
AAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAGAACAT
GCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGAGGATA
AGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCAAACAC
GACGAGCTGTAGAAGCTTTCTAGACC
BS16226.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:16:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9847-PB | 696 | Fkbp13-RB | 1..696 | 17..712 | 3480 | 100 | Plus |
CG9847-PA | 651 | Fkbp13-RA | 1..651 | 62..712 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:04:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RC | 1301 | CG9847-RC | 107..802 | 17..712 | 3480 | 100 | Plus |
Fkbp14-RF | 1350 | CG9847-RF | 199..851 | 60..712 | 3265 | 100 | Plus |
Fkbp14-RE | 1294 | CG9847-RE | 143..795 | 60..712 | 3265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:04:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21495131..21495326 | 255..60 | 980 | 100 | Minus |
2R | 25286936 | 2R | 21488017..21488207 | 534..344 | 955 | 100 | Minus |
2R | 25286936 | 2R | 21487666..21487847 | 712..531 | 910 | 100 | Minus |
2R | 25286936 | 2R | 21488271..21488363 | 346..254 | 465 | 100 | Minus |
2R | 25286936 | 2R | 21497781..21497823 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 00:04:28 has no hits.
BS16226.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:16:26 Download gff for
BS16226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9847-PB | 1..696 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:52:55 Download gff for
BS16226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 107..806 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:34:26 Download gff for
BS16226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 107..806 | 17..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:34:26 Download gff for
BS16226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21488019..21488206 | 345..532 | 100 | <- | Minus |
2R | 21488273..21488361 | 256..344 | 100 | <- | Minus |
2R | 21495131..21495326 | 60..255 | 100 | <- | Minus |
2R | 21497781..21497823 | 17..59 | 100 | | Minus |
2R | 21487662..21487845 | 533..717 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:52:55 Download gff for
BS16226.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17375167..17375350 | 533..717 | 98 | <- | Minus |
arm_2R | 17375524..17375711 | 345..532 | 100 | <- | Minus |
arm_2R | 17375778..17375866 | 256..344 | 100 | <- | Minus |
arm_2R | 17382636..17382831 | 60..255 | 100 | <- | Minus |
arm_2R | 17385286..17385328 | 17..59 | 100 | | Minus |
BS16226.complete Sequence
728 bp assembled on 2007-05-07
GenBank Submission: FJ638097
> BS16226.complete
GAAGTTATCAGTCGACATGAATAACTTTTTGGAATACATTTCGGTATTAC
ATTGTTCCTCCATGTCGAAATCCAATCTCGTTATCTCGTGCCTTCTGCTG
GTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTGGAGGT
GATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGATTCCC
TCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAATTCGAC
TCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCCGGCCA
GGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGGTGAGA
AGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGGGTGCC
GGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAGCTGAT
CAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGATCGACG
ATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATCTAAAG
AAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAGAACAT
GCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGAGGATA
AGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCAAACAC
GACGAGCTGTAGAAGCTTTCTAGACCAT
BS16226.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RF | 651 | CG9847-PF | 1..651 | 62..712 | 3255 | 100 | Plus |
Fkbp14-RE | 651 | CG9847-PE | 1..651 | 62..712 | 3255 | 100 | Plus |
Fkbp14-RC | 651 | CG9847-PC | 1..651 | 62..712 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:54:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-RC | 1301 | CG9847-RC | 107..802 | 17..712 | 3480 | 100 | Plus |
Fkbp14-RF | 1350 | CG9847-RF | 199..851 | 60..712 | 3265 | 100 | Plus |
Fkbp14-RE | 1294 | CG9847-RE | 143..795 | 60..712 | 3265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:54:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21495131..21495326 | 255..60 | 980 | 100 | Minus |
2R | 25286936 | 2R | 21488017..21488207 | 534..344 | 955 | 100 | Minus |
2R | 25286936 | 2R | 21487666..21487847 | 712..531 | 910 | 100 | Minus |
2R | 25286936 | 2R | 21488271..21488363 | 346..254 | 465 | 100 | Minus |
2R | 25286936 | 2R | 21497781..21497823 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:54:15 has no hits.
BS16226.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:19:39 Download gff for
BS16226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp13-RB | 1..696 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:38:05 Download gff for
BS16226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp13-RC | 104..799 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:31 Download gff for
BS16226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 107..802 | 17..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:19:39 Download gff for
BS16226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp13-RB | 104..803 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:06:30 Download gff for
BS16226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fkbp14-RC | 107..802 | 17..712 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:06:30 Download gff for
BS16226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21487666..21487845 | 533..712 | 100 | <- | Minus |
2R | 21488019..21488206 | 345..532 | 100 | <- | Minus |
2R | 21488273..21488361 | 256..344 | 100 | <- | Minus |
2R | 21495131..21495326 | 60..255 | 100 | <- | Minus |
2R | 21497781..21497823 | 17..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:31 Download gff for
BS16226.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17375524..17375711 | 345..532 | 100 | <- | Minus |
arm_2R | 17375778..17375866 | 256..344 | 100 | <- | Minus |
arm_2R | 17375171..17375350 | 533..712 | 100 | <- | Minus |
arm_2R | 17382636..17382831 | 60..255 | 100 | <- | Minus |
arm_2R | 17385286..17385328 | 17..59 | 100 | | Minus |
BS16226.pep Sequence
Translation from 16 to 711
> BS16226.pep
MNNFLEYISVLHCSSMSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPE
VCEQKSKNGDSLTMHYTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGW
DQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNA
PPTTNVFKEIDDNADKQLSREEVSEYLKKQMTAVEGQDSEELKNMLAEND
KLVEEIFQHEDKDKNGFISHDEFSGPKHDEL*
BS16226.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:52:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fkbp14-PF | 216 | CG9847-PF | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PE | 216 | CG9847-PE | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PC | 216 | CG9847-PC | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PA | 216 | CG9847-PA | 1..216 | 16..231 | 1117 | 100 | Plus |
Fkbp14-PD | 220 | CG9847-PD | 1..220 | 16..231 | 1102 | 98.2 | Plus |