Clone Sequence Records
BS16262.3prime Sequence
345 bp (345 high quality bases) assembled on 2007-05-15
> BS16262.3prime
ATGGTCTAGAAAGCTTTTAGTCGAGATTATGATTGCATTTCCCGCGAGAG
GAAGTGAGTGCAAATCGGAAATTAGCCCCATCCACACTATTCACATTTAT
GTACATTGAACTTTTAGCCAAATCACAGCCGGTAAAATGGCTCAATTCAA
ACGAGGCAAACAACAAAATCATTTTAGCCCACAAACCATTTCTTTGCTGT
TTGTAAACAGCTGAAAAACGCTGGAAATTGTTTATGGCTGTTACTGTTCT
CGAACATTTCATCGGTTGGCCATAAAAGGGCATGACAAATGAATGAAATT
CGTTGGCAATTTTCGTTTTCAGTGCCCTCATGTCGACTGATAACT
BS16262.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:22:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30477-PA | 315 | CG30477-RA | 1..315 | 331..17 | 1575 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 15:58:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:58:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14642724..14643039 | 331..16 | 1580 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 15:58:09 has no hits.
BS16262.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:22:37 Download gff for
BS16262.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30477-PA | 1..315 | 17..331 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:31:17 Download gff for
BS16262.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14642724..14643041 | 11..331 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:31:17 Download gff for
BS16262.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14642724..14643041 | 11..331 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:20:09 Download gff for
BS16262.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10530229..10530546 | 11..331 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:20:09 Download gff for
BS16262.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10530229..10530546 | 11..331 | 99 | | Minus |
BS16262.5prime Sequence
345 bp (345 high quality bases) assembled on 2007-05-15
> BS16262.5prime
GAAGTTATCAGTCGACATGAGGGCACTGAAAACGAAAATTGCCAACGAAT
TTCATTCATTTGTCATGCCCTTTTATGGCCAACCGATGAAATGTTCGAGA
ACAGTAACAGCCATAAACAATTTCCAGCGTTTTTCAGCTGTTTACAAACA
GCAAAGAAATGGTTTGTGGGCTAAAATGATTTTGTTGTTTGCCTCGTTTG
AATTGAGCCATTTTACCGGCTGTGATTTGGCTAAAAGTTCAATGTACATA
AATGTGAATAGTGTGGATGGGGCTAATTTCCGATTTGCACTCACTTCCTC
TCGCGGGAAATGCAATCATAATCTCGACTAAAAGCTTTCTAGACC
BS16262.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:17:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30477-PA | 315 | CG30477-RA | 1..315 | 17..331 | 1575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 16:29:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:29:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14642724..14643039 | 17..332 | 1580 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:29:05 has no hits.
BS16262.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:17:32 Download gff for
BS16262.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30477-PA | 1..315 | 17..331 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:42:29 Download gff for
BS16262.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14642724..14643041 | 17..337 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:42:29 Download gff for
BS16262.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14642724..14643041 | 17..337 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:50:18 Download gff for
BS16262.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10530229..10530546 | 17..337 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:50:18 Download gff for
BS16262.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10530229..10530546 | 17..337 | 99 | | Plus |
BS16262.complete Sequence
347 bp assembled on 2007-05-07
> BS16262.complete
GAAGTTATCAGTCGACATGAGGGCACTGAAAACGAAAATTGCCAACGAAT
TTCATTCATTTGTCATGCCCTTTTATGGCCAACCGATGAAATGTTCGAGA
ACAGTAACAGCCATAAACAATTTCCAGCGTTTTTCAGCTGTTTACAAACA
GCAAAGAAATGGTTTGTGGGCTAAAATGATTTTGTTGTTTGCCTCGTTTG
AATTGAGCCATTTTACCGGCTGTGATTTGGCTAAAAGTTCAATGTACATA
AATGTGAATAGTGTGGATGGGGCTAATTTCCGATTTGCACTCACTTCCTC
TCGCGGGAAATGCAATCATAATCTCGACTAAAAGCTTTCTAGACCAT
BS16262.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:55:26 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 10:55:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:55:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14642724..14643039 | 17..332 | 1580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:55:25 has no hits.
BS16262.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 13:45:04 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:34:15 Download gff for
BS16262.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14642724..14643036 | 17..329 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:34:15 Download gff for
BS16262.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14642724..14643036 | 17..329 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:42:58 Download gff for
BS16262.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10530229..10530541 | 17..329 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:42:58 Download gff for
BS16262.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10530229..10530541 | 17..329 | 100 | | Plus |
BS16262.pep Sequence
Translation from 16 to 330
> BS16262.pep
MRALKTKIANEFHSFVMPFYGQPMKCSRTVTAINNFQRFSAVYKQQRNGL
WAKMILLFASFELSHFTGCDLAKSSMYINVNSVDGANFRFALTSSRGKCN
HNLD*
Sequence BS16262.pep has no blast hits.