Clone Sequence Records
BS16302.3prime Sequence
861 bp (776 high quality bases) assembled on 2007-05-15
> BS16302.3prime
ATGGTCTAGAAAGCTTCTATTCCTTGGAGACGGGTTTGCAGGCTATCATG
TACACTGGAAAGAGTCCCTTGGGAAAGTTTTGTTGCTTGACCTTGCGTAC
AATGCGAAATCCGGCTTCCTTTAGGAAGTGTTCATAGCTGTCCAGAGGCC
TCGTTACCGACGAGTCGTTCCTATCTTCCACTGTCTTCTTCGAGCTGCTC
ACGTTCTCCTTCAGACACAAGAAGGCGCCGGGCGCCAGTCCCTGCTTTAT
GCGTCGAAAGAACGAGACCAGATCGCGGTCCGTGAGATGGCCCAGGACCC
ACTGGGTCCAAACGAGGTCGTACTGTTGCGTAGGCGTAAACTTCTGCAAT
CCCACGTTATAGATCTGTCCCACCTTTCCACGGCTTCCGTCTTCCGAAGT
GCAGTACTCCCGTGCTTTATCGGCAAACGCGGGATCCTGCTCGACAAGAT
CCACGCAGCTGAAGCGGGGGATCAGGAGATTCCGAGTCACCCGACCAATG
CCAGCTCCGCAGTCGAGGGCCAACCTGTTGCCCGGCACGCGGATCTCGCG
CAGGAACACATTCGATCCCTGTATATCTATGGCACTAATGTAGCCCAGGC
CGCCGAGCATCCCGTTAACAGTCGCCGGTACCTCAGACCAATATTTTTGT
GCCTTATTGTAAAATTCGGACTCCGGTGCGGCGACTTTGGTCGAACTATC
GCTCGAAGAAGGGGACGCTGTCTTGGCATCTGAACTTGCGGCTATACTGC
TATCATCCTTCTGCTTCGACGACCCCTGGACCTTATCCGTGGTCTCGTCC
ATCATCTGCAACTTGTCTGAAAGCTGCTCTTCTAATGTAGTCGTCATGTC
GACTGATAACT
BS16302.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1675-PA | 831 | CG1675-RA | 1..831 | 847..17 | 4155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntmt-RA | 1053 | CG1675-RA | 73..903 | 847..17 | 4155 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9865704..9866534 | 847..17 | 4155 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:10:50 has no hits.
BS16302.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:32:04 Download gff for
BS16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1675-PA | 1..831 | 17..847 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:17:16 Download gff for
BS16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..909 | 6..847 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:23:42 Download gff for
BS16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..909 | 6..847 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:23:42 Download gff for
BS16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9865704..9866540 | 6..847 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:17:16 Download gff for
BS16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5753209..5754045 | 6..847 | 99 | | Minus |
BS16302.5prime Sequence
861 bp (824 high quality bases) assembled on 2007-05-15
> BS16302.5prime
GAAGTTATCAGTCGACATGACGACTACATTAGAAGAGCAGCTTTCAGACA
AGTTGCAGATGATGGACGAGACCACGGATAAGGTCCAGGGGTCGTCGAAG
CAGAAGGATGATAGCAGTATAGCCGCAAGTTCAGATGCCAAGACAGCGTC
CCCTTCTTCGAGCGATAGTTCGACCAAAGTCGCCGCACCGGAGTCCGAAT
TTTACAATAAGGCACAAAAATATTGGTCTGAGGTACCGGCGACTGTTAAC
GGGATGCTCGGCGGCCTGGGCTACATTAGTGCCATAGATATACAGGGATC
GAATGTGTTCCTGCGCGAGATCCGCGTGCCGGGCAACAGGTTGGCCCTCG
ACTGCGGAGCTGGCATTGGTCGGGTGACTCGGAATCTCCTGATCCCCCGC
TTCAGCTGCGTGGATCTTGTCGAGCAGGATCCCGCGTTTGCCGATAAAGC
ACGGGAGTACTGCACTTCGGAAGACGGAAGCCGTGGAAAGGTGGGACAGA
TCTATAACGTGGGATTGCAGAAGTTTACGCCTACGCAACAGTACGACCTC
GTTTGGACCCAGTGGGTCCTGGGCCATCTCACGGACCGCGATCTGGTCTC
GTTCTTTCGACGCATAAAGCAGGGACTGGCGCCCGGCGCCTTCTTGTGTC
TGAAGGAGAACGTGAGCAGCTCGAAGAAGACAGTGGAAGATAGGAACGAC
TCGTCGGTAACGAGGCCTCTGGACAGCTATGAACACTTCCTAAAGGAAGC
CGGATTTCGCATTGTACGCAAGGTCAAGCAACAAAACTTTCCCAAGGGAC
TCTTTCCAGTGTACATGATAGCCTGCAAACCCGTCTCCAAGGAATAGAAG
CTTTCTAGACC
BS16302.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1675-PA | 831 | CG1675-RA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:03:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntmt-RA | 1053 | CG1675-RA | 73..903 | 17..847 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:03:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9865704..9866534 | 17..847 | 4155 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 21:03:35 has no hits.
BS16302.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:26:00 Download gff for
BS16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1675-PA | 1..831 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:38:34 Download gff for
BS16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..909 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:38:41 Download gff for
BS16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..909 | 17..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:38:41 Download gff for
BS16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9865704..9866540 | 17..858 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:38:34 Download gff for
BS16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5753209..5754045 | 17..858 | 99 | | Plus |
BS16302.complete Sequence
863 bp assembled on 2007-05-07
GenBank Submission: FJ638875
> BS16302.complete
GAAGTTATCAGTCGACATGACGACTACATTAGAAGAGCAGCTTTCAGACA
AGTTGCAGATGATGGACGAGACCACGGATAAGGTCCAGGGGTCGTCGAAG
CAGAAGGATGATAGCAGTATAGCCGCAAGTTCAGATGCCAAGACAGCGTC
CCCTTCTTCGAGCGATAGTTCGACCAAAGTCGCCGCACCGGAGTCCGAAT
TTTACAATAAGGCACAAAAATATTGGTCTGAGGTACCGGCGACTGTTAAC
GGGATGCTCGGCGGCCTGGGCTACATTAGTGCCATAGATATACAGGGATC
GAATGTGTTCCTGCGCGAGATCCGCGTGCCGGGCAACAGGTTGGCCCTCG
ACTGCGGAGCTGGCATTGGTCGGGTGACTCGGAATCTCCTGATCCCCCGC
TTCAGCTGCGTGGATCTTGTCGAGCAGGATCCCGCGTTTGCCGATAAAGC
ACGGGAGTACTGCACTTCGGAAGACGGAAGCCGTGGAAAGGTGGGACAGA
TCTATAACGTGGGATTGCAGAAGTTTACGCCTACGCAACAGTACGACCTC
GTTTGGACCCAGTGGGTCCTGGGCCATCTCACGGACCGCGATCTGGTCTC
GTTCTTTCGACGCATAAAGCAGGGACTGGCGCCCGGCGCCTTCTTGTGTC
TGAAGGAGAACGTGAGCAGCTCGAAGAAGACAGTGGAAGATAGGAACGAC
TCGTCGGTAACGAGGCCTCTGGACAGCTATGAACACTTCCTAAAGGAAGC
CGGATTTCGCATTGTACGCAAGGTCAAGCAACAAAACTTTCCCAAGGGAC
TCTTTCCAGTGTACATGATAGCCTGCAAACCCGTCTCCAAGGAATAGAAG
CTTTCTAGACCAT
BS16302.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:42:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntmt-RA | 831 | CG1675-PA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:42:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntmt-RA | 1053 | CG1675-RA | 73..903 | 17..847 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:42:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9865704..9866534 | 17..847 | 4155 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:42:07 has no hits.
BS16302.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:06 Download gff for
BS16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1675-RA | 1..831 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:50 Download gff for
BS16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1675-RA | 56..886 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:13:06 Download gff for
BS16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..903 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:07 Download gff for
BS16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1675-RA | 56..886 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:39 Download gff for
BS16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..903 | 17..847 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:39 Download gff for
BS16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9865704..9866534 | 17..847 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:13:06 Download gff for
BS16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5753209..5754039 | 17..847 | 100 | | Plus |
BS16302.pep Sequence
Translation from 16 to 846
> BS16302.pep
MTTTLEEQLSDKLQMMDETTDKVQGSSKQKDDSSIAASSDAKTASPSSSD
SSTKVAAPESEFYNKAQKYWSEVPATVNGMLGGLGYISAIDIQGSNVFLR
EIRVPGNRLALDCGAGIGRVTRNLLIPRFSCVDLVEQDPAFADKAREYCT
SEDGSRGKVGQIYNVGLQKFTPTQQYDLVWTQWVLGHLTDRDLVSFFRRI
KQGLAPGAFLCLKENVSSSKKTVEDRNDSSVTRPLDSYEHFLKEAGFRIV
RKVKQQNFPKGLFPVYMIACKPVSKE*
BS16302.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntmt-PA | 276 | CG1675-PA | 1..276 | 1..276 | 1423 | 100 | Plus |
