Clone BS16324 Report

Search the DGRC for BS16324

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:163
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG7945-RB
Protein status:BS16324.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16324.3prime Sequence

777 bp (777 high quality bases) assembled on 2007-05-15

> BS16324.3prime
ATGGTCTAGAAAGCTTTTAATGGCTAACAGTTTGCTTATTCAGATAAGCC
ATTAAGGCCTGGAGCCGCTTCTTGATGTTCTTCTGATCGTCCAGAGTGCA
GCCAAGCAAAACGCTCTCGAACTTCTTGTCGACCGGCCCAACATCGGCCT
CGGGCACGGTGTCCATGTGTCCGGATGGATCCATTGAGCTGCTGCAGCAG
GCGTTTAAGTAAAACTGGCATCGTTGGCGTCCGATCACGGGATCACCCAT
CTTGATCATGCTGTCAATCAATACATTTATCTGGCTAAGGGAATCCTCCT
GAGAGTTGTCCCGAACAGTGCGCACACGCAGCTCCACGGTGGCCAAGCGA
GAGCTCACCCGTTGTAGGTACAAAATGATCTCCTCTCGTTCAGCTTCGCT
CATGTTCTGCATCATTTCGTTGCTCTTGATCAGATCCATGGACATCAGAA
GGTAGTCTTTCTTCTCCTGCAGGTTGAGTGCATCCTTGCGCAGCTTCTCC
ACACGTGCATCCAAACTATCCAGTATGGTGACAAATCTCTCGCTGGCGTT
AAATGGTCTATCTGAATGTGGGCTGTGAAAAGAGCCTTCGGTCCAGGAGG
CGTCAAAGCCATCATTGGACTCGGGCGTATCGGCTTCTATATCTTCCGGA
TATCGGTTTATTATCTCCGCCTCCTGGGCGGGTTGCGGCGGCGGTGGCGG
CGGTGTTGTGTCCGACTCGCAGCGACGCCGTTTCCGAAAAATACCTCGAA
AATTCTCAAACATGTCGACTGATAACT

BS16324.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:35:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG7945-PB 747 CG7945-RB 1..747 763..17 3735 100 Minus
CG7945-PA 789 CG7945-RA 247..789 559..17 2715 100 Minus
CG7945-PC 429 CG7945-RC 1..429 445..17 2145 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7945-RB 1275 CG7945-RB 421..1167 763..17 3735 100 Minus
CG7945-RA 1451 CG7945-RA 801..1343 559..17 2715 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15521819..15522197 17..395 1895 100 Plus
3L 28110227 3L 15523512..15523717 558..763 1030 100 Plus
3L 28110227 3L 15522360..15522504 394..538 725 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:54:53 has no hits.

BS16324.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:35:36 Download gff for BS16324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7945-PB 1..747 17..763 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:11:21 Download gff for BS16324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 408..1169 11..777 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:06 Download gff for BS16324.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 408..1169 11..777 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:06 Download gff for BS16324.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 15523512..15523730 558..777 97   Plus
3L 15521812..15522195 11..393 98 <- Plus
3L 15522360..15522502 394..536 100 <- Plus
3L 15522560..15522580 537..557 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:11:21 Download gff for BS16324.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15514912..15515295 11..393 98 <- Plus
arm_3L 15515460..15515602 394..536 100 <- Plus
arm_3L 15515660..15515680 537..557 100 <- Plus
arm_3L 15516612..15516830 558..777 97   Plus

BS16324.5prime Sequence

777 bp (777 high quality bases) assembled on 2007-05-15

> BS16324.5prime
GAAGTTATCAGTCGACATGTTTGAGAATTTTCGAGGTATTTTTCGGAAAC
GGCGTCGCTGCGAGTCGGACACAACACCGCCGCCACCGCCGCCGCAACCC
GCCCAGGAGGCGGAGATAATAAACCGATATCCGGAAGATATAGAAGCCGA
TACGCCCGAGTCCAATGATGGCTTTGACGCCTCCTGGACCGAAGGCTCTT
TTCACAGCCCACATTCAGATAGACCATTTAACGCCAGCGAGAGATTTGTC
ACCATACTGGATAGTTTGGATGCACGTGTGGAGAAGCTGCGCAAGGATGC
ACTCAACCTGCAGGAGAAGAAAGACTACCTTCTGATGTCCATGGATCTGA
TCAAGAGCAACGAAATGATGCAGAACATGAGCGAAGCTGAACGAGAGGAG
ATCATTTTGTACCTACAACGGGTGAGCTCTCGCTTGGCCACCGTGGAGCT
GCGTGTGCGCACTGTTCGGGACAACTCTCAGGAGGATTCCCTTAGCCAGA
TAAATGTATTGATTGACAGCATGATCAAGATGGGTGATCCCGTGATCGGA
CGCCAACGATGCCAGTTTTACTTAAACGCCTGCTGCAGCAGCTCAATGGA
TCCATCCGGACACATGGACACCGTGCCCGAGGCCGATGTTGGGCCGGTCG
ACAAGAAGTTCGAGAGCGTTTTGCTTGGCTGCACTCTGGACGATCAGAAG
AACATCAAGAAGCGGCTCCAGGCCTTAATGGCTTATCTGAATAAGCAAAC
TGTTAGCCATTAAAAGCTTTCTAGACC

BS16324.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7945-PB 747 CG7945-RB 1..747 17..763 3735 100 Plus
CG7945-PA 789 CG7945-RA 247..789 221..763 2715 100 Plus
CG7945-PC 429 CG7945-RC 1..429 335..763 2145 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7945-RB 1275 CG7945-RB 421..1167 17..763 3735 100 Plus
CG7945-RA 1451 CG7945-RA 801..1343 221..763 2715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15521819..15522197 763..385 1895 100 Minus
3L 28110227 3L 15523512..15523717 222..17 1030 100 Minus
3L 28110227 3L 15522360..15522504 386..242 725 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:23:17 has no hits.

BS16324.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:29:32 Download gff for BS16324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7945-PB 1..747 17..763 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:15:13 Download gff for BS16324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 409..1169 5..769 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:32:12 Download gff for BS16324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 409..1169 5..769 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:32:12 Download gff for BS16324.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15521812..15522195 387..769 98 <- Minus
3L 15522360..15522502 244..386 100 <- Minus
3L 15522560..15522580 223..243 100 <- Minus
3L 15523512..15523723 11..222 98 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:15:13 Download gff for BS16324.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15514912..15515295 387..769 98 <- Minus
arm_3L 15515460..15515602 244..386 100 <- Minus
arm_3L 15515660..15515680 223..243 100 <- Minus
arm_3L 15516612..15516823 11..222 98 <- Minus

BS16324.complete Sequence

779 bp assembled on 2007-05-07

GenBank Submission: FJ638119

> BS16324.complete
GAAGTTATCAGTCGACATGTTTGAGAATTTTCGAGGTATTTTTCGGAAAC
GGCGTCGCTGCGAGTCGGACACAACACCGCCGCCACCGCCGCCGCAACCC
GCCCAGGAGGCGGAGATAATAAACCGATATCCGGAAGATATAGAAGCCGA
TACGCCCGAGTCCAATGATGGCTTTGACGCCTCCTGGACCGAAGGCTCTT
TTCACAGCCCACATTCAGATAGACCATTTAACGCCAGCGAGAGATTTGTC
ACCATACTGGATAGTTTGGATGCACGTGTGGAGAAGCTGCGCAAGGATGC
ACTCAACCTGCAGGAGAAGAAAGACTACCTTCTGATGTCCATGGATCTGA
TCAAGAGCAACGAAATGATGCAGAACATGAGCGAAGCTGAACGAGAGGAG
ATCATTTTGTACCTACAACGGGTGAGCTCTCGCTTGGCCACCGTGGAGCT
GCGTGTGCGCACTGTTCGGGACAACTCTCAGGAGGATTCCCTTAGCCAGA
TAAATGTATTGATTGACAGCATGATCAAGATGGGTGATCCCGTGATCGGA
CGCCAACGATGCCAGTTTTACTTAAACGCCTGCTGCAGCAGCTCAATGGA
TCCATCCGGACACATGGACACCGTGCCCGAGGCCGATGTTGGGCCGGTCG
ACAAGAAGTTCGAGAGCGTTTTGCTTGGCTGCACTCTGGACGATCAGAAG
AACATCAAGAAGCGGCTCCAGGCCTTAATGGCTTATCTGAATAAGCAAAC
TGTTAGCCATTAAAAGCTTTCTAGACCAT

BS16324.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG7945-RB 747 CG7945-PB 1..747 17..763 3735 100 Plus
CG7945-RA 789 CG7945-PA 247..789 221..763 2715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG7945-RB 1275 CG7945-RB 421..1167 17..763 3735 100 Plus
CG7945-RA 1451 CG7945-RA 801..1343 221..763 2715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15521819..15522197 763..385 1895 100 Minus
3L 28110227 3L 15523512..15523717 222..17 1030 100 Minus
3L 28110227 3L 15522360..15522504 386..242 725 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:38:29 has no hits.

BS16324.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:31:50 Download gff for BS16324.complete
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 1..747 17..763 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:04:16 Download gff for BS16324.complete
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 371..1131 5..769 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:12:28 Download gff for BS16324.complete
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 427..1165 23..761 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:31:51 Download gff for BS16324.complete
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 371..1131 5..769 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:31 Download gff for BS16324.complete
Subject Subject Range Query Range Percent Splice Strand
CG7945-RB 427..1165 23..761 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:31 Download gff for BS16324.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15523512..15523711 23..222 100   Minus
3L 15521821..15522195 387..761 100 <- Minus
3L 15522360..15522502 244..386 100 <- Minus
3L 15522560..15522580 223..243 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:12:28 Download gff for BS16324.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15515460..15515602 244..386 100 <- Minus
arm_3L 15515660..15515680 223..243 100 <- Minus
arm_3L 15516612..15516811 23..222 100   Minus
arm_3L 15514921..15515295 387..761 100 <- Minus

BS16324.pep Sequence

Translation from 16 to 762

> BS16324.pep
MFENFRGIFRKRRRCESDTTPPPPPPQPAQEAEIINRYPEDIEADTPESN
DGFDASWTEGSFHSPHSDRPFNASERFVTILDSLDARVEKLRKDALNLQE
KKDYLLMSMDLIKSNEMMQNMSEAEREEIILYLQRVSSRLATVELRVRTV
RDNSQEDSLSQINVLIDSMIKMGDPVIGRQRCQFYLNACCSSSMDPSGHM
DTVPEADVGPVDKKFESVLLGCTLDDQKNIKKRLQALMAYLNKQTVSH*

BS16324.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:24:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG7945-PB 248 CG7945-PB 1..248 1..248 1285 100 Plus
CG7945-PA 262 CG7945-PA 82..262 68..248 910 100 Plus