Clone Sequence Records
BS16350.complete Sequence
449 bp assembled on 2010-02-09
GenBank Submission: KX805230
> BS16350.complete
GAAGTTATCAGTCGACATGGCCATCGCCTATTTCATACCCGACCAGGCCC
AATTGTTGGCCAGAAGCTATCAGCAAAACGGCCAGCAGACAGCAGCGAGT
CCAAGGACAACTGCAACAGCTGCTGCACCATCGCAGCAGCAGCAACAATC
GCAACAACAGCAGCAGCAGCAGCGACATCATCATCAGCAACAGCGCCCAC
AATTCCGTGCCAATATTTCCGTGCCGCTGGGAAGTCAACAGGGATCGATG
ACCATGTCGGAGTTTGGATGCTGGGATCTTTTGGCCCAGATCTTCTGCTA
CGCTCTGCGAATCTACAGCTACAGTTCGAGCCAGCGTCAACCGACGGTCA
TTCAGATATCCTTCGAGATCAGCAGCGGCGGTCAGAACAACGATGAGGAC
GACGTGACTGATGCCACCTCCAAGGAGAACTAAAAGCTTTCTAGACCAT
BS16350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| grim-RA | 417 | CG4345-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| grim-RA | 1699 | CG4345-RA | 318..736 | 16..434 | 2095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18303682..18304100 | 434..16 | 2095 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:28:16 has no hits.
BS16350.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:31 Download gff for
BS16350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grim-RA | 316..730 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:58 Download gff for
BS16350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grim-RA | 319..733 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:41 Download gff for
BS16350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grim-RA | 316..730 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:35 Download gff for
BS16350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grim-RA | 319..733 | 17..431 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:35 Download gff for
BS16350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18303685..18304099 | 17..431 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:58 Download gff for
BS16350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18296785..18297199 | 17..431 | 100 | | Minus |
BS16350.3prime Sequence
447 bp (440 high quality bases) assembled on 2007-05-15
> BS16350.3prime
ATGGTCTAGAAAGCTTTTAGTTCTCCTTGGAGGTGGCATCAGTCACGTCG
TCCTCATCGTTGTTCTGACCGCCGCTGCTGATCTCGAAGGATATCTGAAT
GACCGTCGGTTGACGCTGGCTCGAACTGTAGCTGTAGATTCGCAGAGCGT
AGCAGAAGATCTGGGCCAAAAGATCCCAGCATCCAAACTCCGACATGGTC
ATCGATCCCTGTTGACTTCCCAGCGGCACGGAAATATTGGCACGGAATTG
TGGGCGCTGTTGCTGATGATGATGTCGCTGCTGCTGCTGCTGTTGTTGCG
ATTGTTGCTGCTGCTGCGATGGTGCAGCAGCTGTTGCAGTTGTCCTTGGA
CTCGCTGCTGTCTGCTGGCCGTTTTGCTGATAGCTTCTGGCCAACAATTG
GGCCTGGTCGGGTATGAAATAGGCGATGGCCATGTCGACTGATAACT
BS16350.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4345-PA | 417 | grim-RA | 1..417 | 433..17 | 2085 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:58:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| grim-RA | 1699 | CG4345-RA | 318..736 | 434..16 | 2095 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:58:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18303682..18304100 | 16..434 | 2095 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:58:44 has no hits.
BS16350.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:33:33 Download gff for
BS16350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4345-PA | 1..417 | 17..433 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:47:27 Download gff for
BS16350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grim-RA | 311..739 | 10..443 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:04:55 Download gff for
BS16350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grim-RA | 311..739 | 10..443 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:04:55 Download gff for
BS16350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18303679..18304107 | 10..443 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:47:27 Download gff for
BS16350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18296779..18297207 | 10..443 | 98 | | Plus |
BS16350.pep Sequence
Translation from 16 to 432
> BS16350.pep
MAIAYFIPDQAQLLARSYQQNGQQTAASPRTTATAAAPSQQQQQSQQQQQ
QQRHHHQQQRPQFRANISVPLGSQQGSMTMSEFGCWDLLAQIFCYALRIY
SYSSSQRQPTVIQISFEISSGGQNNDEDDVTDATSKEN*
BS16350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| grim-PA | 138 | CG4345-PA | 1..138 | 1..138 | 710 | 100 | Plus |
