Clone BS16457 Report

Search the DGRC for BS16457

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:164
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG3777-RA
Protein status:BS16457.pep: full length peptide match
Sequenced Size:2672

Clone Sequence Records

BS16457.complete Sequence

2672 bp assembled on 2009-12-07

GenBank Submission: KX805165

> BS16457.complete
GAAGTTATCAGTCGACATGCTTCTCAAGGTATTTTTACTGGTCTTCATCG
CCACCCACCACTTGGTAGACTCAGCGGGTCCCCTTTCCAATATAGCCAGC
GAAAGTAAACCAAAATCGTTCGAGGAGATTTTGCCTTCGGCGGTTCCCTT
TGAGACCTCACACAAACATCCGGGTGCCGGGGAGTGGGTGGAGGGATTTC
AAACCTCCCATAAAATAAGCATAAGGGCCACCGATTCCGCTGACTATTCG
ATGAATCTGCTGCCTACTAAAGAGCGACCCGAATTGAACCCCGTTTTGAG
TGCACTTATCAACGAAGATGTTATGAAGAGCATCGAGGCCAAAAGAGCCA
TAGAAGAAGAGGAGCTGGCCGAGGTTAGGCGTGAAATTGAGCAGGCCGCC
GTGTTAGAGTTGGCCCAGAAGAGGGGCTTTACCACTACTGAGACACCTGC
TCTTCTGTTGACGACTTTGCCCACAGCTGGCAAGAAGCTCGATAACTTGG
ATGAGGACATAGTCCTGGATCCTCACGAAGATTTTATCAACCAAAATTTT
GCCCTGGAGAGTGCGGGTAGTGAGAACAGCAAGAAATCCCGAATAGAGAT
TAAAAAGGGACCCAATGGCCAGGACTACGAGTACGAGTATGTCTATTACT
ATGAAGAGGACGATGACTCAAGCAAGGTGGATCCATCTGCAGAGCCCGAC
ACGCGTGGTAAGACTAGATATACCAATATCGAGAGGAGCACGACGGCCAC
TCCGAGTGGAAATAGCCTACAGAGTGACAAGGCCAAAGGAAGATCATCTG
ATACCTCTGAAGATATAGAGGCTGAACGGCTTCCGATGATCACTCGGTTT
CCCAGTCGTGGCAAGAACATTGAAGTGCCACCAACAGCAGCTCTTGATTC
TTTGGAAATCGCTGCCGAGCGCAAGAAGATTAGTGTTAAGCGCCCCAGTT
TGGAGTTGGTGGATAGTGCTACCTTCAACACGGATGAGAAACAGACCAAG
GCAGCTCGCAAGGGTGAAAATGAATTAAAACCAGTAATTGCTATCGAACA
GGAGGAGGCAGCCAGAAAGAAAATGCAACAGGTTAAGGAGGAGCAGGCAA
GGAAAGAGAAGGAGACCGAAATGTCAATCGATCAGGAGGATTTTGAGCAG
ACCACGCCGTCCATGGAGAAGGCCGCTCTAGATCTTTATGCCATATTGAC
CAATGAAAACCTCAATAACGAACAAACTACTGTAATTCCGGATACCGTAG
GTTCAGAGGGTTTCACCACTTTGGCAACAGAAACTGCAAGTACTGATGAG
GATGAGGCCGGTGTCATGACCACGCTGATTAATGAGATTTCATCGAGTAC
CAGCACCACTACGACGGCAGCAACAACCACCACGACTACAACAACAACGG
AACCACCTACAACAACCTCCACCACTACAACAACCACGGCTGCTCCCTCT
CTTTTTGGTGGAAGGAGAGCCGGCTTGAGTGGTTTGGGCGGACGTAATCG
CTTTAAGTTAACCAGGGCTGAAGGTGGCAGCACCACCACTAGCACCACTG
AGGCATCGGTGGCTGCAGAAACAAACAAGACTGGTAGAAATCGTTTTTCG
CGCCCCTCGATAGGAGGGCGTTCTCGACCCGGAGCTCGTACCACCACAGC
ACCAGATGCCACATCAGTAGCTGCCCCTGACGCCGAGGAGGGTATAGTGG
TTGCCAAGGAAGTCAAGCCTGTCAGTACGTCCTTCGCACGAGGAAGACCT
CGCAACCGCTTCAGCTTGCGCGTCTCAACCACGACTGCGCGACCCAGCGA
GGAATCTCCAGCTGAAGATGACGCCCCCGCCGAATCTTCATCAACGACTA
CAAGAAGCACATTGAGGGGTCGTCCCGGACTTGGATTACGTGGACGCAGT
CGTACAACCACTACAAAGGCACCCGCTAGTTCAGAGGGTGCCGAAGCGGT
AGAGCCTAATGCCACTGCTAGTTCCGAAGACGTCAAGTCCGGGTTGATTT
CGCCTTCTACCGGGGAATCAGGGCGTCCGTCCCGTTTTAACATTCACCGC
GCTGGTAGCAATCGTCTGTTATCCCGCGGAAAACTGGGAAGATCGGGAGT
AAGCACGGAAGCACCCAAGGAAAGTCAAACTGCCGAGGATTCCGCCGCCG
AAAGCAGTAGTCACCTCAACGACGTCAAAGAGGAGCAGATGTCCGCTGGC
GAGTTTAGCGAAAAGACGAACGAAGCAGGTGATTCCGCTGCCGTCGTTCC
AGCGGCTCCTGTATCCGGGTTAAATCGTCTTAGAACTCGACCACGTCTCA
ACGCCCTAACGCATAAGACTGATGCGGTTAAGCCTAAGGCATCCGCAGCC
CCCGCCCCCGCGCCAAGGAAGATTAATCCTCTGTTGGCAAAGCGACGACT
CCAACTGGGAGCCACTTCCACCACAGAGTCCCCCGCTGAGGAGGAGCATT
TAGCGCTGGACTCCTCCGCGGAGCAGTCCGACAAAGAGGAGTCGTTTGCC
GGAGGAAGCAACGAGACGGGCGGAGAAGGCCCCGGAAAGCCGGAGCATGA
AACTACGGAAGCGACGGAGGCAACAACTAAGCAGCAGCCCCGCGGTCTTG
GACTTTTAGGACAGCGTCGTCGTCTGCCGCTCCGCAAACCCGGAACGATC
CTGTAAAAGCTTTCTAGACCAT

BS16457.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 2640 CG3777-PE 1..2640 17..2656 13200 100 Plus
CG3777-RD 2640 CG3777-PD 1..2640 17..2656 13200 100 Plus
CG3777-RC 2640 CG3777-PC 1..2640 17..2656 13200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 3428 CG3777-RE 260..2901 17..2658 13210 100 Plus
CG3777-RD 4130 CG3777-RD 660..3301 17..2658 13210 100 Plus
CG3777-RC 3402 CG3777-RC 234..2875 17..2658 13210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 346149..347707 31..1589 7795 100 Plus
X 23542271 X 348647..349324 1749..2426 3390 100 Plus
X 23542271 X 349440..349675 2423..2658 1180 100 Plus
X 23542271 X 348080..348238 1590..1748 795 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:01:01 has no hits.

BS16457.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:28 Download gff for BS16457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 230..2867 17..2654 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:41 Download gff for BS16457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3777-RA 208..2845 17..2654 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:55:48 Download gff for BS16457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 230..2867 17..2654 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:01 Download gff for BS16457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 234..2871 17..2654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:01 Download gff for BS16457.complete
Subject Subject Range Query Range Percent Splice Strand
X 346149..347707 31..1589 100 -> Plus
X 348080..348238 1590..1748 100 -> Plus
X 348647..349324 1749..2426 100 -> Plus
X 349444..349671 2427..2654 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:41 Download gff for BS16457.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 240182..241740 31..1589 100 -> Plus
arm_X 242113..242271 1590..1748 100 -> Plus
arm_X 242680..243357 1749..2426 100 -> Plus
arm_X 243477..243704 2427..2654 100   Plus

BS16457.3prime Sequence

887 bp (849 high quality bases) assembled on 2007-05-15

> BS16457.3prime
ATGGTCTAGAAAGCTTTTACAGGATCGTTCCGGGTTTGCGGAGCGGCAGA
CGACGACGCTGTCCTAAAAGTCCAAGACCGCGGGGCTGCTGCTTAGTTGT
TGCCTCCGTCGCTTCCGTAGTTTCATGCTCCGGCTTTCCGGGGCCTTCTC
CGCCCGTCTCGTTGCTTCCTCCGGCAAACGACTCCTCTTTGTCGGACTGC
TCCGCGGAGGAGTCCAGCGCTAAATGCTCCTCCTCAGCGGGGGACTCTGT
GGTGGAAGTGGCTCCCAGTTGGAGTCGTCGCTTTGCCAACAGAGGATTAA
TCTTCCTTGGCGCGGGGGCGGGGGCTGCGGATGCCTTAGGCTTAACCGCA
TGCAGTCTTATGCGTTAGGGCGTTGAGACGTGGTCGAGTTCTAAGACGAT
TTAACCCGGATACAGGAGCCGCTGGAACGACGGCAGCGGAATCACCTGCT
TCGTTCGTCTTTTCGCTAAACTCGCCAGCGGACATCTGCTCCTCTTTGAC
GTCGTTGAGGTGACTACTGCTTTCGGCGGCGGAATCCTCGGCAGTTTGAC
TTTCCTTGGGTGCTTCCGTGCTTACTCCCGATCTTCCCAGTTTTCCGCGG
GATAACAGACGATTGCTACCAGCGCGGTGAATGTTAAAACGGGACGGACG
CCCTGATTCCCCGGTAGAAGGCGAAATCAACCCGGACTTGACGTCTTCGG
AACTAGCAGTGGCATTAGGCTCTACCGCTTCGGCACCCTCTGAACTAGCG
GGTGCCTTTGTAGTGGTTGTACGACTGCGTCCACGTAATCCAAGTCCGGG
ACGACCCCTCAATGTGCTTCTTGTAGTCGTTGATGAAGATTCGGCGGGGG
CCTCATCTTCAGCTGGAGATCCCTCGCTGGCTCGCGC

BS16457.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-PB 2640 CG3777-RB 1771..2305 887..353 2600 99.4 Minus
CG3777-PA 2640 CG3777-RA 1771..2305 887..353 2600 99.4 Minus
CG3777-PC 2640 CG3777-RC 1771..2305 887..353 2600 99.4 Minus
CG3777-PB 2640 CG3777-RB 2306..2640 351..17 1675 100 Minus
CG3777-PA 2640 CG3777-RA 2306..2640 351..17 1675 100 Minus
CG3777-PC 2640 CG3777-RC 2306..2640 351..17 1675 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 3428 CG3777-RE 2030..2901 887..15 4295 99.5 Minus
CG3777-RD 4130 CG3777-RD 2430..3301 887..15 4295 99.5 Minus
CG3777-RC 3402 CG3777-RC 2004..2875 887..15 4295 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:13:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 348685..349324 887..247 3110 99.4 Minus
X 23542271 X 349440..349675 250..15 1180 100 Minus
Blast to na_te.dros performed on 2015-02-10 15:13:42 has no hits.

BS16457.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:44:18 Download gff for BS16457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-PC 1771..2640 17..887 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:20:45 Download gff for BS16457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RA 1978..2849 15..887 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:16:36 Download gff for BS16457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 2004..2875 15..887 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:16:36 Download gff for BS16457.3prime
Subject Subject Range Query Range Percent Splice Strand
X 348685..349324 247..887 99 -> Minus
X 349444..349675 15..246 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:20:45 Download gff for BS16457.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 242718..243357 247..887 99 -> Minus
arm_X 243477..243708 15..246 100   Minus

BS16457.5prime Sequence

853 bp (783 high quality bases) assembled on 2007-05-15

> BS16457.5prime
GAAGTTATCAGTCGACATGCTTCTCAAGGTATTTTTACTGGTCTTCATCG
CCACCCACCACTTGGTAGACTCAGCGGGTCCCCTTTCCAATATAGCCAGC
GAAAGTAAACCAAAATCGTTCGAGGAGATTTTGCCTTCGGCGGTTCCCTT
TGAGACCTCACACAAACATCCGGGTGCCGGGGAGTGGGTGGAGGGATTTC
AAACCTCCCATAAAATAAGCATAAGGGCCACCGATTCCGCTGACTATTCG
ATGAATCTGCTGCCTACTAAAGAGCGACCCGAATTGAACCCCGTTTTGAG
TGCACTTATCAACGAAGATGTTATGAAGAGCATCGAGGCCAAAAGAGCCA
TAGAAGAAGAGGAGCTGGCCGAGGTTAGGCGTGAAATTGAGCAGGCCGCC
GTGTTAGAGTTGGCCCAGAAGAGGGGCTTTACCACTACTGAGACACCTGC
TCTTCTGTTGACGACTTTGCCCACAGCTGGCAAGAAGCTCGATAACTTGG
ATGAGGACATAGTCCTGGATCCTCACGAAGATTTTATCAACCAAAATTTT
GCCCTGGAGAGTGCGGGTAGTGAGAACAGCAAGAAATCCCGAATAGAGAT
TAAAAAGGGACCCAATGGCCAGGACTACGAGTACGAGTATGTCTATTACT
ATGAAGAGGACGATGACTCAAGCAAGGTGGATCCATCTGCAGAGCCCGAC
ACGCGTGGTAAGACTAGATATACCAATATCGAGAGGAGCACGACGGCCAC
TCCGAGTGGAAATAGCCTACAGAGTGACAAGGCCAAAGGAAGATCATCTG
ATACCTCTGAAGATATAGAGGCTGAACGGCTTCCGATGATCACTCGGTTT
CCC

BS16457.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-PB 2640 CG3777-RB 1..837 17..853 4185 100 Plus
CG3777-PA 2640 CG3777-RA 1..837 17..853 4185 100 Plus
CG3777-PC 2640 CG3777-RC 1..837 17..853 4185 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-RE 3428 CG3777-RE 260..1096 17..853 4185 100 Plus
CG3777-RD 4130 CG3777-RD 660..1496 17..853 4185 100 Plus
CG3777-RC 3402 CG3777-RC 234..1070 17..853 4185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:04:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 346149..346971 31..853 4115 100 Plus
Blast to na_te.dros performed on 2015-02-11 04:04:54 has no hits.

BS16457.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:39:31 Download gff for BS16457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-PC 1..837 17..853 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:27:42 Download gff for BS16457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RA 200..1044 7..853 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:35:25 Download gff for BS16457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3777-RC 226..1070 7..853 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:35:25 Download gff for BS16457.5prime
Subject Subject Range Query Range Percent Splice Strand
X 346149..346971 31..853 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:27:42 Download gff for BS16457.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 240182..241004 31..853 100   Plus

BS16457.pep Sequence

Translation from 16 to 2655

> BS16457.pep
MLLKVFLLVFIATHHLVDSAGPLSNIASESKPKSFEEILPSAVPFETSHK
HPGAGEWVEGFQTSHKISIRATDSADYSMNLLPTKERPELNPVLSALINE
DVMKSIEAKRAIEEEELAEVRREIEQAAVLELAQKRGFTTTETPALLLTT
LPTAGKKLDNLDEDIVLDPHEDFINQNFALESAGSENSKKSRIEIKKGPN
GQDYEYEYVYYYEEDDDSSKVDPSAEPDTRGKTRYTNIERSTTATPSGNS
LQSDKAKGRSSDTSEDIEAERLPMITRFPSRGKNIEVPPTAALDSLEIAA
ERKKISVKRPSLELVDSATFNTDEKQTKAARKGENELKPVIAIEQEEAAR
KKMQQVKEEQARKEKETEMSIDQEDFEQTTPSMEKAALDLYAILTNENLN
NEQTTVIPDTVGSEGFTTLATETASTDEDEAGVMTTLINEISSSTSTTTT
AATTTTTTTTTEPPTTTSTTTTTTAAPSLFGGRRAGLSGLGGRNRFKLTR
AEGGSTTTSTTEASVAAETNKTGRNRFSRPSIGGRSRPGARTTTAPDATS
VAAPDAEEGIVVAKEVKPVSTSFARGRPRNRFSLRVSTTTARPSEESPAE
DDAPAESSSTTTRSTLRGRPGLGLRGRSRTTTTKAPASSEGAEAVEPNAT
ASSEDVKSGLISPSTGESGRPSRFNIHRAGSNRLLSRGKLGRSGVSTEAP
KESQTAEDSAAESSSHLNDVKEEQMSAGEFSEKTNEAGDSAAVVPAAPVS
GLNRLRTRPRLNALTHKTDAVKPKASAAPAPAPRKINPLLAKRRLQLGAT
STTESPAEEEHLALDSSAEQSDKEESFAGGSNETGGEGPGKPEHETTEAT
EATTKQQPRGLGLLGQRRRLPLRKPGTIL*

BS16457.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG3777-PE 879 CG3777-PE 1..879 1..879 4394 100 Plus
CG3777-PD 879 CG3777-PD 1..879 1..879 4394 100 Plus
CG3777-PC 879 CG3777-PC 1..879 1..879 4394 100 Plus
CG3777-PA 879 CG3777-PA 1..879 1..879 4394 100 Plus
CG3777-PB 879 CG3777-PB 1..879 1..879 4394 100 Plus