Clone Sequence Records
BS16458.3prime Sequence
801 bp (800 high quality bases) assembled on 2007-05-15
> BS16458.3prime
ATGGTCTAGAAAGCTTTTACTTGAATCGCGAACTGAAGGCATTGGACAAC
TCATTGATGGCTGCCTGGCCCACCGCCTGGTTCACCTGTCCACGCATACT
CTCCGGCACATAGCGATTGGCTCCCGATTGCTGGACAATGGCGCCGCCGA
CAGCTCCGGACACACGGGATGGTAGCATTGGTGGGGGAAGAGATCCTCCG
GGACGACCGCCGGGTAGTGGTGGTGCCCCACCTCCTGGGCGATTCGGAAT
CGCTGGCGCTGGGCGACCTGTAGATGGTGGCAATGGTGGGTTCCGTCCAC
CCAAGGAGCTCTGTGCGGGAGGTCCTGGCTTTCCTCGAACGCCACCCGGA
CTTGGAGGAGAAAGACGTGGGTTGTCCAAGCCGCTGGGCAGCCAATCGTT
CTTAACCGGCGGTGGCAATGGCGACGACACGGTGGCCATTGATACGTCAC
CTATTATCTGTAATGCATCCTTGCAAGCACGGTACATGCGCAGCATTTCC
TCTCGCCGTGTTGCCGATTCAGCCGACTCCTCCATCATCTGGGCCTGATC
GCCGGACGCGTAAAGATGTGCCAGCAGCTCGCCATTGATAAAGTCCTTGG
CATTGTTGATGATCAGCATCATAATTGCTTTGGGCACCATGTCACGGGTG
GTCTTCGTAACGATCTTCATGTAGGAATCAACCAGATTACGAATGGTCTC
GACCTGCCGCTCCAGCTGTGGATCGCTGGAACTCTCCTCGCTGGCCGACT
CATCGCCGTTTTCCTGAGTCTCCTGCTTTTCGGGATAGACACCAGCTCGC
A
BS16458.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18102-PD | 2634 | shi-RD | 1850..2634 | 801..17 | 3925 | 100 | Minus |
| CG18102-PF | 2634 | shi-RF | 1850..2634 | 801..17 | 3925 | 100 | Minus |
| CG18102-PG | 2634 | shi-RG | 1850..2634 | 801..17 | 3925 | 100 | Minus |
| CG18102-PH | 2493 | shi-RH | 1850..2483 | 801..168 | 3170 | 100 | Minus |
| CG18102-PI | 2493 | shi-RI | 1850..2483 | 801..168 | 3170 | 100 | Minus |
| CG18102-PB | 2493 | shi-RB | 1850..2483 | 801..168 | 3170 | 100 | Minus |
| CG18102-PC | 2493 | shi-RC | 1850..2483 | 801..168 | 3170 | 100 | Minus |
| CG18102-PA | 2493 | shi-RA | 1850..2483 | 801..168 | 3170 | 100 | Minus |
| CG18102-PE | 2493 | shi-RE | 1850..2483 | 801..168 | 3170 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:17:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shi-RN | 3712 | CG18102-RN | 2136..2920 | 801..17 | 3925 | 100 | Minus |
| shi-RK | 3300 | CG18102-RK | 2188..2972 | 801..17 | 3925 | 100 | Minus |
| shi-RJ | 3380 | CG18102-RJ | 2268..3052 | 801..17 | 3925 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:16:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15901542..15901748 | 750..544 | 1035 | 100 | Minus |
| X | 23542271 | X | 15905774..15905924 | 167..17 | 755 | 100 | Minus |
| X | 23542271 | X | 15902187..15902332 | 313..168 | 730 | 100 | Minus |
| X | 23542271 | X | 15901976..15902117 | 452..311 | 710 | 100 | Minus |
| X | 23542271 | X | 15901820..15901918 | 547..449 | 495 | 100 | Minus |
| X | 23542271 | X | 15899022..15899074 | 801..749 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:17:01 has no hits.
BS16458.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:46:24 Download gff for
BS16458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18102-PG | 1851..2634 | 17..800 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:51:14 Download gff for
BS16458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RJ | 2267..3054 | 13..800 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:07:01 Download gff for
BS16458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RJ | 2269..3056 | 13..800 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:07:01 Download gff for
BS16458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15899023..15899074 | 749..800 | 100 | -> | Minus |
| X | 15901544..15901747 | 545..748 | 100 | -> | Minus |
| X | 15901823..15901916 | 451..544 | 100 | -> | Minus |
| X | 15901978..15902117 | 311..450 | 100 | -> | Minus |
| X | 15902190..15902332 | 168..310 | 100 | -> | Minus |
| X | 15905774..15905928 | 13..167 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:51:14 Download gff for
BS16458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15793056..15793107 | 749..800 | 100 | -> | Minus |
| arm_X | 15795577..15795780 | 545..748 | 100 | -> | Minus |
| arm_X | 15795856..15795949 | 451..544 | 100 | -> | Minus |
| arm_X | 15796011..15796150 | 311..450 | 100 | -> | Minus |
| arm_X | 15796223..15796365 | 168..310 | 100 | -> | Minus |
| arm_X | 15799807..15799961 | 13..167 | 98 | | Minus |
BS16458.5prime Sequence
844 bp (804 high quality bases) assembled on 2007-05-15
> BS16458.5prime
GAAGTTATCAGTCGACATGGATAGTTTAATTACAATTGTTAACAAGCTGC
AAGATGCGTTCACATCGCTCGGCGTCCACATGCAACTGGATCTGCCGCAG
ATCGCGGTGGTCGGTGGCCAGTCAGCTGGCAAGAGTTCCGTTTTGGAGAA
CTTTGTGGGCAAAGATTTCTTGCCGCGCGGCTCTGGTATCGTAACTCGGA
GACCACTAATCTTGCAACTGATCAATGGAGTTACCGAATATGGCGAGTTC
CTTCACATTAAAGGCAAGAAGTTTTCCAGCTTCGATGAGATCAGAAAAGA
AATCGAAGATGAAACGGATCGTGTGACCGGTAGTAACAAAGGCATTTCAA
ACATTCCAATTAATTTGCGCGTCTACTCGCCGCACGTACTCAATTTAACC
CTGATCGATTTGCCAGGCCTGACAAAGGTGGCCATTGGCGATCAACCGGT
GGATATTGAGCAGCAAATTAAGCAGATGATATTCCAATTTATTCGCAAAG
AGACTTGTTTAATTTTGGCTGTGACCCCGGCCAATACGGATCTGGCCAAT
TCGGATGCCCTCAAGCTGGCCAAGGAGGTGGATCCACAGGGTGTGCGAAC
CATTGGCGTTATAACCAAGCTGGATCTGATGGACGAGGGCACCGATGCAC
GCGACATTCTGGAGAATAAGCTGCTTCCGCTGCGACGTGGCTATATTGGC
GTGGTGAATAGATCCCAAAAGGATATCGAGGGGCGCAAGGATATCCACCA
GGCATTGGCCGCCGAACGCAAGTTCTTCTTGAGCCATCCCTCCTATCGGC
ACATGGCCGACCGTCTCGGCACCTCCTACTTGCAGCGCGTGCTC
BS16458.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18102-PH | 2493 | shi-RH | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PI | 2493 | shi-RI | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PB | 2493 | shi-RB | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PC | 2493 | shi-RC | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PD | 2634 | shi-RD | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PA | 2493 | shi-RA | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PE | 2493 | shi-RE | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PF | 2634 | shi-RF | 1..828 | 17..844 | 4115 | 99.8 | Plus |
| CG18102-PG | 2634 | shi-RG | 1..828 | 17..844 | 4115 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:08:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shi-RO | 4768 | CG18102-RO | 396..1223 | 17..844 | 4125 | 99.9 | Plus |
| shi-RN | 3712 | CG18102-RN | 230..1057 | 17..844 | 4125 | 99.9 | Plus |
| shi-RM | 4198 | CG18102-RM | 419..1246 | 17..844 | 4125 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:08:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15894834..15895442 | 236..844 | 3030 | 99.8 | Plus |
| X | 23542271 | X | 15893005..15893150 | 17..162 | 730 | 100 | Plus |
| X | 23542271 | X | 15894693..15894766 | 163..236 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 04:08:46 has no hits.
BS16458.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:41:43 Download gff for
BS16458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18102-PG | 1..828 | 17..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:28:16 Download gff for
BS16458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RM | 409..1244 | 8..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:38:59 Download gff for
BS16458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RM | 411..1246 | 8..844 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:38:59 Download gff for
BS16458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15892997..15893150 | 8..162 | 97 | -> | Plus |
| X | 15894693..15894766 | 163..236 | 100 | -> | Plus |
| X | 15894835..15895442 | 237..844 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:28:16 Download gff for
BS16458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15787030..15787183 | 8..162 | 97 | -> | Plus |
| arm_X | 15788726..15788799 | 163..236 | 100 | -> | Plus |
| arm_X | 15788868..15789475 | 237..844 | 99 | | Plus |
BS16458.complete Sequence
2666 bp assembled on 2009-12-07
GenBank Submission: KX804317
> BS16458.complete
GAAGTTATCAGTCGACATGGATAGTTTAATTACAATTGTTAACAAGCTGC
AAGATGCGTTCACATCGCTCGGCGTCCACATGCAACTGGATCTGCCGCAG
ATCGCGGTGGTCGGTGGCCAGTCAGCTGGCAAGAGTTCCGTTTTGGAGAA
CTTTGTGGGCAAAGATTTCTTGCCGCGCGGCTCTGGTATCGTAACTCGGA
GACCACTAATCTTGCAACTGATCAATGGAGTTACCGAATATGGCGAGTTC
CTTCACATTAAAGGCAAGAAGTTTTCCAGCTTCGATGAGATCAGAAAAGA
AATCGAAGATGAAACGGATCGTGTGACCGGTAGTAACAAAGGCATTTCAA
ACATTCCAATTAATTTGCGCGTCTACTCGCCGCACGTACTCAATTTAACC
CTGATCGATTTGCCAGGCCTGACAAAGGTGGCCATTGGCGATCAACCGGT
GGATATTGAGCAGCAAATTAAGCAGATGATATTCCAATTTATTCGCAAAG
AGACTTGTTTAATTTTGGCTGTGACCCCGGCCAATACGGATCTGGCCAAT
TCGGATGCCCTCAAGCTGGCCAAGGAGGTGGATCCACAGGGTGTGCGAAC
CATTGGCGTTATAACCAAGCTGGATCTGATGGACGAGGGCACCGATGCAC
GCGACATTCTGGAGAATAAGCTGCTTCCGCTGCGACGTGGCTATATTGGC
GTGGTGAATAGATCCCAAAAGGATATCGAGGGGCGCAAGGATATCCACCA
GGCATTGGCCGCCGAACGCAAGTTCTTCTTGAGCCATCCCTCCTATCGGC
ACATGGCCGACCGTCTCGGCACCCCCTACTTGCAGCGCGTGCTCAACCAA
CAACTAACCAATCACATCAGGGACACGTTACCTGGCCTGCGGGATAAGTT
GCAGAAGCAGATGCTCACTTTGGAGAAGGAGGTGGAGGAGTTTAAGCACT
TTCAGCCAGGCGATGCTAGCATCAAAACAAAAGCTATGCTCCAAATGATT
CAGCAGCTGCAATCAGACTTTGAGCGAACTATCGAGGGCAGCGGCTCAGC
TTTGGTGAACACAAACGAGCTCTCAGGTGGCGCCAAGATCAATCGCATTT
TCCATGAACGTCTGCGCTTTGAGATCGTAAAGATGGCTTGCGATGAAAAG
GAACTGCGACGAGAGATCTCATTTGCAATTCGAAATATCCATGGTATTCG
CGTTGGCCTCTTCACACCCGACATGGCGTTCGAGGCGATTGTCAAGCGGC
AGATAGCGCTGCTCAAGGAGCCGGTTATCAAGTGTGTCGATCTAGTCGTA
CAGGAACTTTCTGTGGTCGTGCGCATGTGCACAGCTAAAATGAGTCGATA
CCCACGTCTGCGTGAGGAGACCGAACGTATTATCACAACACATGTGCGCC
AACGCGAGCATAGCTGCAAGGAACAGATCCTGCTGCTTATTGACTTTGAG
CTGGCCTATATGAACACCAATCATGAGGACTTCATTGGCTTCGCCAACGC
TCAAAACAAATCAGAGAATGCCAACAAAACTGGCACTCGTCAACTGGGCA
ACCAAGTCATTCGCAAGGGTCACATGGTCATCCAGAACCTTGGAATCATG
AAAGGTGGATCGCGTCCGTATTGGTTTGTGCTGACATCCGAGAGTATCTC
CTGGTATAAGGACGAGGATGAGAAGGAGAAGAAATTTATGCTGCCGTTGG
ATGGTTTAAAATTGCGTGATATTGAACAGGGATTTATGTCAATGTCTAGA
CGTGTTACATTTGCTTTATTTAGTCCCGATGGACGTAATGTTTATAAGGA
CTACAAACAACTGGAGCTCTCGTGCGAGACTGTGGAGGATGTGGAGTCCT
GGAAAGCATCCTTCCTGCGAGCTGGTGTCTATCCCGAAAAGCAGGAGACT
CAGGAAAACGGCGATGAGTCGGCCAGCGAGGAGAGTTCCAGCGATCCACA
GCTGGAGCGGCAGGTCGAGACCATTCGTAATCTGGTTGATTCCTACATGA
AGATCGTTACGAAGACCACCCGTGACATGGTGCCCAAAGCAATTATGATG
CTGATCATCAACAATGCCAAGGACTTTATCAATGGCGAGCTGCTGGCACA
TCTTTACGCGTCCGGCGATCAGGCCCAGATGATGGAGGAGTCGGCTGAAT
CGGCAACACGGCGAGAGGAAATGCTGCGCATGTACCGTGCTTGCAAGGAT
GCATTACAGATAATAGGTGACGTATCAATGGCCACCGTGTCGTCGCCATT
GCCACCGCCGGTTAAGAACGATTGGCTGCCCAGCGGCTTGGACAACCCAC
GTCTTTCTCCTCCAAGTCCGGGTGGCGTTCGAGGAAAGCCAGGACCTCCC
GCACAGAGCTCCTTGGGTGGACGGAACCCACCATTGCCACCATCTACAGG
TCGCCCAGCGCCAGCGATTCCGAATCGCCCAGGAGGTGGGGCACCACCAC
TACCCGGCGGTCGTCCCGGAGGATCTCTTCCCCCACCAATGCTACCATCC
CGTGTGTCCGGAGCTGTCGGCGGCGCCATTGTCCAGCAATCGGGAGCCAA
TCGCTATGTGCCGGAGAGTATGCGTGGACAGGTGAACCAGGCGGTGGGCC
AGGCAGCCATCAATGAGTTGTCCAATGCCTTCAGTTCGCGATTCAAGTAA
AAGCTTTCTAGACCAT
BS16458.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shi-RK | 2634 | CG18102-PK | 1..2634 | 17..2650 | 13170 | 100 | Plus |
| shi-RJ | 2634 | CG18102-PJ | 1..2634 | 17..2650 | 13170 | 100 | Plus |
| shi-RG | 2634 | CG18102-PG | 1..2634 | 17..2650 | 13170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:11:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shi-RK | 3300 | CG18102-RK | 339..2972 | 17..2650 | 13170 | 100 | Plus |
| shi-RJ | 3380 | CG18102-RJ | 419..3052 | 17..2650 | 13170 | 100 | Plus |
| shi-RG | 3190 | CG18102-RG | 229..2862 | 17..2650 | 13170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:11:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15894834..15895591 | 236..993 | 3790 | 100 | Plus |
| X | 23542271 | X | 15895845..15896074 | 1110..1339 | 1150 | 100 | Plus |
| X | 23542271 | X | 15901542..15901748 | 1917..2123 | 1035 | 100 | Plus |
| X | 23542271 | X | 15897100..15897296 | 1603..1799 | 985 | 100 | Plus |
| X | 23542271 | X | 15896147..15896304 | 1340..1497 | 790 | 100 | Plus |
| X | 23542271 | X | 15905774..15905924 | 2500..2650 | 755 | 100 | Plus |
| X | 23542271 | X | 15893005..15893150 | 17..162 | 730 | 100 | Plus |
| X | 23542271 | X | 15902187..15902332 | 2354..2499 | 730 | 100 | Plus |
| X | 23542271 | X | 15901976..15902117 | 2215..2356 | 710 | 100 | Plus |
| X | 23542271 | X | 15898953..15899074 | 1797..1918 | 610 | 100 | Plus |
| X | 23542271 | X | 15895662..15895778 | 994..1110 | 585 | 100 | Plus |
| X | 23542271 | X | 15896366..15896474 | 1498..1606 | 545 | 100 | Plus |
| X | 23542271 | X | 15901820..15901918 | 2120..2218 | 495 | 100 | Plus |
| X | 23542271 | X | 15894693..15894766 | 163..236 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:11:36 has no hits.
BS16458.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:51:37 Download gff for
BS16458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RG | 229..2860 | 17..2648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:15 Download gff for
BS16458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RG | 229..2860 | 17..2648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:22:12 Download gff for
BS16458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RG | 229..2860 | 17..2648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:51 Download gff for
BS16458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shi-RG | 229..2860 | 17..2648 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:51 Download gff for
BS16458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15901544..15901747 | 1919..2122 | 100 | -> | Plus |
| X | 15901823..15901916 | 2123..2216 | 100 | -> | Plus |
| X | 15901978..15902117 | 2217..2356 | 100 | -> | Plus |
| X | 15902190..15902332 | 2357..2499 | 100 | -> | Plus |
| X | 15905774..15905922 | 2500..2648 | 100 | | Plus |
| X | 15893005..15893150 | 17..162 | 100 | -> | Plus |
| X | 15894693..15894766 | 163..236 | 100 | -> | Plus |
| X | 15894835..15895591 | 237..993 | 100 | -> | Plus |
| X | 15895662..15895778 | 994..1110 | 100 | -> | Plus |
| X | 15895846..15896074 | 1111..1339 | 100 | -> | Plus |
| X | 15896147..15896304 | 1340..1497 | 100 | -> | Plus |
| X | 15896366..15896472 | 1498..1604 | 100 | -> | Plus |
| X | 15897102..15897295 | 1605..1798 | 100 | -> | Plus |
| X | 15898955..15899074 | 1799..1918 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:15 Download gff for
BS16458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15787038..15787183 | 17..162 | 100 | -> | Plus |
| arm_X | 15788726..15788799 | 163..236 | 100 | -> | Plus |
| arm_X | 15788868..15789624 | 237..993 | 100 | -> | Plus |
| arm_X | 15789695..15789811 | 994..1110 | 100 | -> | Plus |
| arm_X | 15789879..15790107 | 1111..1339 | 100 | -> | Plus |
| arm_X | 15790180..15790337 | 1340..1497 | 100 | -> | Plus |
| arm_X | 15790399..15790505 | 1498..1604 | 100 | -> | Plus |
| arm_X | 15791135..15791328 | 1605..1798 | 100 | -> | Plus |
| arm_X | 15792988..15793107 | 1799..1918 | 100 | -> | Plus |
| arm_X | 15795577..15795780 | 1919..2122 | 100 | -> | Plus |
| arm_X | 15795856..15795949 | 2123..2216 | 100 | -> | Plus |
| arm_X | 15796011..15796150 | 2217..2356 | 100 | -> | Plus |
| arm_X | 15796223..15796365 | 2357..2499 | 100 | -> | Plus |
| arm_X | 15799807..15799955 | 2500..2648 | 100 | | Plus |
BS16458.pep Sequence
Translation from 16 to 2649
> BS16458.pep
MDSLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKD
FLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDET
DRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQ
IKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVIT
KLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQKDIEGRKDIHQALAAE
RKFFLSHPSYRHMADRLGTPYLQRVLNQQLTNHIRDTLPGLRDKLQKQML
TLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSDFERTIEGSGSALVNTN
ELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIHGIRVGLFT
PDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTAKMSRYPRLRE
ETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSE
NANKTGTRQLGNQVIRKGHMVIQNLGIMKGGSRPYWFVLTSESISWYKDE
DEKEKKFMLPLDGLKLRDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLE
LSCETVEDVESWKASFLRAGVYPEKQETQENGDESASEESSSDPQLERQV
ETIRNLVDSYMKIVTKTTRDMVPKAIMMLIINNAKDFINGELLAHLYASG
DQAQMMEESAESATRREEMLRMYRACKDALQIIGDVSMATVSSPLPPPVK
NDWLPSGLDNPRLSPPSPGGVRGKPGPPAQSSLGGRNPPLPPSTGRPAPA
IPNRPGGGAPPLPGGRPGGSLPPPMLPSRVSGAVGGAIVQQSGANRYVPE
SMRGQVNQAVGQAAINELSNAFSSRFK*
BS16458.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:17:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shi-PK | 877 | CG18102-PK | 1..877 | 1..877 | 4485 | 100 | Plus |
| shi-PJ | 877 | CG18102-PJ | 1..877 | 1..877 | 4485 | 100 | Plus |
| shi-PG | 877 | CG18102-PG | 1..877 | 1..877 | 4485 | 100 | Plus |
| shi-PF | 877 | CG18102-PF | 1..877 | 1..877 | 4485 | 100 | Plus |
| shi-PP | 881 | CG18102-PP | 1..881 | 1..877 | 4470 | 99.5 | Plus |
