Clone BS16476 Report

Search the DGRC for BS16476

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:164
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptPi3K92E-RA
Protein status:BS16476.pep: full length peptide match
Sequenced Size:3299

Clone Sequence Records

BS16476.complete Sequence

3299 bp assembled on 2009-12-08

GenBank Submission: KX803682

> BS16476.complete
GAAGTTATCAGTCGACATGAACATGATGGACAACCGGGCGTTGGCCTACG
TGGCCCACCAGCCCAAGTATGAGACACCGCCGGAAGAAGCGGAGCCGCCC
TGCATGCGCTTTTCGGTTAACCTGTGGAAAAACGAGATGCTGAACTGGGT
GGACCTAATCTGCCTGTTGCCCAATGGATTCCTGCTGGAGCTCAGGGTCA
ATCCGGCCAACACCATCCAGGTAATCAAGGTGGAGATGGTCAACCAGGCC
AAACAGATGCCACTGGGCTATGTGATCAAAGAGGCCTGCGAGTACCAGGT
GTACGGCATCTCGACCTTCAACATCGAACCTTACACCGACGAAACGAAGC
GACTCAGTGAGGTCCAGCCGTACTTCGGCATCCTCAGCCTCGGCGAGCGC
ACCGACACAACGAGCTTTAGCAGCGACTACGAGCTGACCAAGATGGTTAA
CGGAATGATCGGCACCACCTTCGATCATAATCGAACGCACGGCTCGCCCG
AGATTGACGACTTCCGGCTGTATATGACCCAAACTTGCGACAACATCGAA
CTGGAGCGCTCCGCCTACACCTGGCAGCAGAGACTGCTCTACGAGCATCC
TCTGCGACTGGCGAACTCGACTAAAATGCCCGAGCTGATACGGGAGCGGC
ATCCGACCAGAACCTTTCTCATCGTCGTAAAGAACGAGAACGACCAGAGC
ACGTTTACGTTGTCGGTGAACGAGCAGGACACTCCCTTCTCGCTCACGGA
AAGCACGCTGCAGAAGATGAATCGGTCGCAGATGAAAATGAACGACCGGA
CCTCCGACTACATACTCAAAGTGAGCGGTCGCGACGAGTACCTGCTTGGC
GACTATCCCCTGATTCAGTTCCTGTACATCCAAGAGATGCTCTCGGACTC
GGCGGTTCCAAATGTGGTGTTGCAATCAGTTTACCGCCTAGAGTCCTACA
TCAACCACCACAACGAGCAGGCCATGGTAACCAAACGACCGCTGCCGAAG
AAACGGACAGTCCACCTCCACAAGTCGATCTCCTCGCTGTGGGACATGGG
CAACTACTTTCAGTTGACGCTGCACAGCATTTCCAATGTGAACTTTGACA
AGACGCGTGCCCTCAAGGTGGGCGTGCATGTGTGCCTATATCACGGCGAC
AAGAAGTTATGCGCCCAGCGATCAACGGACTCCCCTAACGGCAACTTTGA
CACGTTCCTGTTTAATGACCTGGTGATGGACTTTGACATACAGATGCGCA
ACCTACCGCGGATGACACGCCTCTGCATTGTGATCTTCGAGGTGACCAAG
ATGTCGCGCTCGAAGAAATCGTCCAACAATAAGGACATCGCTCTGAAAGA
CGTCCCGTACAACAAAAACCCGCTGGCCTGGGTCAACACAACAATTTTCG
ACCACAAGGACATCCTGCGCACCGGTCGCCATACGCTGTACACGTGGACG
TATGCTGACGACATTCAGTCGGTTGAGGTTTTCCATCCGCTGGGCACCAT
CGAACCCAATCCGCGCAAAGAGGAATGTGCGCTGGTGGACCTCACATTCC
TCAGCAGCGGAACCGGAACGGTGCGGTATCCCAGCGAGGAGGTCGTGTTG
CAGTACGCTGCGGATCGAGAGCAGGTCAATCGACTGCAACGGCAACTGGC
AGGGCCAGAAAAGCCGATCAAAGAACTGAAGGAGCTGATGGCCAATTATA
CAGGACTGGATAAGATCTATGAGATGGTTGACCAGGACCGCAATGCCATT
TGGGAACGCAGAAACGACATTTTGCGTGAGCTTCCGGAAGAGCTGTCCAT
CTTACTTCACTGCGTCTATTGGAAGGAGCGTGATGACGTAGCGGATATGT
GGTATCTTCTCAAACAGTGGCCGCTTATTTCTATAGAACGCTCCTTGGAG
CTACTGGACTACGCCTATCCAGATCCGGCAGTGAGACGCTTTGCCATCCG
GTGCTTACACTTTCTGAAAGACGAAGACTTGCTCCTGTATCTGCTGCAAT
TGGTACAGGCCATCAAGCACGAATCGTACCTGGAAAGCGATCTGGTAGTG
TTTCTGCTGGAGCGGGCACTGCGCAACCAACGCATCGGCCACTACTTCTT
CTGGCACCTACGCTCTGAGATGCAGACGCCGTCTATGCAAACACGCTTTG
GCCTACTGCTGGAGGTATACCTCAAGGGTTGCAAACATCACGTGGCGCCG
CTGCGGAAGCAGCTTCATGTGCTAGAGAAGCTGAAACAGGGATCTCTGAT
TGCCAAGAAGGGCAGCAAGGAAAAGGTGAAGACCATGCTGCAGGACTTTC
TGCGGGACCAGCGCAACTCGGCTGTCTTTCAGAACATCCAAAATCCACTT
AATCCCAGCTTCCGGTGCAGTGGTGTAACTCCCGATAGGTGCAAGGTAAT
GGATAGCAAGATGCGACCGCTATGGGTGGTATTCGAGAATGCTGACGTCA
ACGCCAGCGATGTGCACATCATTTTCAAAAACGGTGACGATCTCCGCCAG
GACATGCTCACGTTGCAGATGTTGCGTGTGATGGACCAGCTGTGGAAACG
CGATGGTATGGACTTCCGCATGAACATCTACAACTGCATCAGCATGGAGA
AGAGCCTGGGCATGATCGAGGTGGTGCGCCACGCAGAAACCATTGCCAAC
ATACAAAAGGAAAAGGGCATGTTCTCCGCCACGTCGCCGTTCAAGAAGGG
CTCGCTTCTCAGTTGGCTCAAAGAGCACAACAAGCCCGCCGACAAACTGA
ACAAAGCCATCAACGAGTTCACGCTCAGCTGTGCAGGCTACTGCGTGGCC
ACCTATGTGCTTGGCGTAGCTGATCGACACTCGGACAATATAATGGTCAA
GCGAAATGGACAGCTTTTTCACATCGATTTTGGCCACATCCTGGGCCACT
TCAAGGAAAAGCTTGGAGTACGTCGAGAACGAGTGCCCTTTGTCTTGACC
CACGACTTTGTCTACGTAATCAACAAGGGCTTCAATGACCGCGAGTCTAA
AGAGTTTTGTCATTTTCAGGAATTGTGCGAGCGCGCCTTTCTAGTTTTAC
GCAAACACGGCTGCCTTATTCTATCGCTGTTCTCAATGATGATTTCAACG
GGACTGCCAGAACTGTCCTCCGAAAAGGATTTGGACTACCTACGGGAAAC
TTTAGTGCTGGACTACACGGAGGAAAAAGCACGCGAACATTTCCGAGCGA
AATTCAGCGAAGCTTTGGCCAACTCCTGGAAGACTTCCCTTAACTGGGCC
TCGCACAACTTCTCCAAAAACAACAAACAGTAAAAGCTTTCTAGACCAT

BS16476.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K92E-RC 3267 CG4141-PC 1..3267 17..3283 16320 100 Plus
Pi3K92E-RB 3267 CG4141-PB 1..3267 17..3283 16320 100 Plus
Pi3K92E-RA 3267 CG4141-PA 1..3267 17..3283 16320 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K92E-RC 4839 CG4141-RC 797..4065 16..3284 16330 100 Plus
Pi3K92E-RB 4347 CG4141-RB 305..3573 16..3284 16330 100 Plus
Pi3K92E-RA 4420 CG4141-RA 378..3646 16..3284 16330 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20631778..20633523 1761..16 8715 99.9 Minus
3R 32079331 3R 20630720..20631307 2556..1969 2940 100 Minus
3R 32079331 3R 20630357..20630664 2863..2556 1540 100 Minus
3R 32079331 3R 20631509..20631719 1968..1758 1055 100 Minus
3R 32079331 3R 20630126..20630300 3035..2861 875 100 Minus
3R 32079331 3R 20629746..20629875 3284..3155 650 100 Minus
3R 32079331 3R 20629936..20630058 3157..3035 615 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:50:16 has no hits.

BS16476.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:01 Download gff for BS16476.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RB 282..3530 17..3265 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:11 Download gff for BS16476.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RA 379..3627 17..3265 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:58:29 Download gff for BS16476.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RB 282..3530 17..3265 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:57 Download gff for BS16476.complete
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RA 379..3627 17..3265 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:57 Download gff for BS16476.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20629765..20629875 3155..3265 100 <- Minus
3R 20629939..20630058 3035..3154 100 <- Minus
3R 20630127..20630297 2864..3034 100 <- Minus
3R 20630357..20630663 2557..2863 100 <- Minus
3R 20630720..20631307 1969..2556 100 <- Minus
3R 20631509..20631715 1762..1968 100 <- Minus
3R 20631778..20633522 17..1761 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:11 Download gff for BS16476.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16455487..16455597 3155..3265 100 <- Minus
arm_3R 16455661..16455780 3035..3154 100 <- Minus
arm_3R 16455849..16456019 2864..3034 100 <- Minus
arm_3R 16456079..16456385 2557..2863 100 <- Minus
arm_3R 16456442..16457029 1969..2556 100 <- Minus
arm_3R 16457231..16457437 1762..1968 100 <- Minus
arm_3R 16457500..16459244 17..1761 99   Minus

BS16476.3prime Sequence

894 bp (821 high quality bases) assembled on 2007-05-15

> BS16476.3prime
ATGGTCTAGAAAGCTTTTACTGTTTGTTGTTTTTGGAGAAGTTGTGCGAG
GCCCAGTTAAGGGAAGTCTTCCAGGAGTTGGCCAAAGCTTCGCTGAATTT
CGCTCGGAAATGTTCGCGTGCTTTTTCCTCCGTGTAGTCCAGCACTAAAG
TTTCCCGTAGGTAGTCCAAATCCTTTTCGGAGGACAGTTCTGGCAGTCCC
GTTGAAATCATCATTGAGAACAGCGATAGAATAAGGCAGCCGTGTTTGCG
TAAAACTAGAAAGGCGCGCTCGCACAATTCCTGAAAATGACAAAACTCTT
TAGACTCGCGGTCATTGAAGCCCTTGTTGATTACGTAGACAAAGTCGTGG
GTCAAGACAAAGGGCACTCGTTCTCGACGTACTCCAAGCTTTTCCTTGAA
GTGGCCCAGGATGTGGCCAAAATCGATGTGAAAAAGCTGTCCATTTCGCT
TGACCATTATATTGTCCGAGTGTCGATCAGCTACGCCAAGCACATAGGTG
GCCACGCAGTAGCCTGCACAGCTGAGCGTGAACTCGTTGATGGCTTTGTT
CAGTTTGTCGGCGGGCTTGTTGTGCTCTTTGAGCCAACTGAGAAGCGAGC
CCTTCTTGAACGGCGACGTGGCGGAGAACATGCCCTTTTCCTTTTGTATG
TTGGCAATGGTTTCTGCGTGGCGCACCACCTCGATCATGCCCAGGCTCTT
CTCCATGCTGATGCAGTTGTAGATGTTCATGCGGAAGTCCATACCATCGC
GTTTCCACAGCTGGTCCATCACACGCAACATCTGCAACGTGAGCATGTCC
TGGCGGAGATCGTCACCGTTTTTGAAAATGATGTGCACATCGCTGGCGTT
GACGTCAGCATTCTCGAATACCACCCATAGCGGTCGCATCTTGC

BS16476.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG4141-PA 3267 Pi3K92E-RA 2390..3267 894..17 4390 100 Minus
CG4141-PB 3267 Pi3K92E-RB 2390..3267 894..17 4390 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K92E-RC 4839 CG4141-RC 3187..4065 894..16 4395 100 Minus
Pi3K92E-RB 4347 CG4141-RB 2695..3573 894..16 4395 100 Minus
Pi3K92E-RA 4420 CG4141-RA 2768..3646 894..16 4395 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20630357..20630664 437..744 1540 100 Plus
3R 32079331 3R 20630126..20630300 265..439 875 100 Plus
3R 32079331 3R 20630720..20630870 744..894 755 100 Plus
3R 32079331 3R 20629746..20629875 16..145 650 100 Plus
3R 32079331 3R 20629936..20630058 143..265 615 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:58:50 has no hits.

BS16476.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:46:46 Download gff for BS16476.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4141-PB 2390..3267 17..894 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:52:24 Download gff for BS16476.3prime
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RA 2768..3646 16..894 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:34:38 Download gff for BS16476.3prime
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RA 2768..3646 16..894 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:34:38 Download gff for BS16476.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 20630127..20630297 266..436 100 <- Plus
3R 20630357..20630663 437..743 100 <- Plus
3R 20630720..20630870 744..894 100   Plus
3R 20629746..20629875 16..145 100 <- Plus
3R 20629939..20630058 146..265 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:52:24 Download gff for BS16476.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16455849..16456019 266..436 100 <- Plus
arm_3R 16455468..16455597 16..145 100 <- Plus
arm_3R 16455661..16455780 146..265 100 <- Plus
arm_3R 16456079..16456385 437..743 100 <- Plus
arm_3R 16456442..16456592 744..894 100   Plus

BS16476.5prime Sequence

911 bp (760 high quality bases) assembled on 2007-05-15

> BS16476.5prime
GAAGTTATCAGTCGACATGAACATGATGGACAACCGGGCGTTGGCCTACG
TGGCCCACCAGCCCAAGTATGAGACACCGCCGGAAGAAGCGGAGCCGCCC
TGCATGCGCTTTTCGGTTAACCTGTGGAAAAACGAGATGCTGAACTGGGT
GGACCTAATCTGCCTGTTGCCCAATGGATTCCTGCTGGAGCTCAGGGTCA
ATCCGGCCAACACCATCCAGGTAATCAAGGTGGAGATGGTCAACCAGGCC
AAACAGATGCCACTGGGCTATGTGATCAAAGAGGCCTGCGAGTACCAGGT
GTACGGCATCTCGACCTTCAACATCGAACCTTACACCGACGAAACGAAGC
GACTCAGTGAGGTCCAGCCGTACTTCGGCATCCTCAGCCTCGGCGAGCGC
ACCGACACAACGAGCTTTAGCAGCGACTACGAGCTGACCAAGATGGTTAA
CGGAATGATCGGCACCACCTTCGATCATAATCGAACGCACGGCTCGCCCG
AGATTGACGACTTCCGGCTGTATATGACCCAAACTTGCGACAACATCGAA
CTGGAGCGCTCCGCCTACACCTGGCAGCAGAGACTGCTCTACGAGCATCC
TCTGCGACTGGCGAACTCGACTAAAATGCCCGAGCTGATACGGGAGCGGC
ATCCGACCAGAACCTTTCTCATCGTCGTAAAGAACGAGAACGACCAGAGC
ACGTTTACGTTGTCGGTGAACGAGCAGGACACTCCCTTCTCGCTCACGGA
AAGCACGCTGCAGAAGATGAATCGGTCGCAGATGAAAATGAACGACCGGA
CCTCCGACTACATACTCAAAGTGAGCGGTCGCGACGAGTACCTGCTTGGC
GACTATCCCCTGATTCAGTTCCTGTACATCCAAGAGATGCTCTCGGACTC
CGCGGTTCCCA

BS16476.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG4141-PA 3267 Pi3K92E-RA 1..893 17..909 4440 99.8 Plus
CG4141-PB 3267 Pi3K92E-RB 1..893 17..909 4440 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:33:32
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K92E-RC 4839 CG4141-RC 797..1690 16..909 4455 99.9 Plus
Pi3K92E-RB 4347 CG4141-RB 305..1198 16..909 4455 99.9 Plus
Pi3K92E-RA 4420 CG4141-RA 378..1271 16..909 4455 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20632630..20633523 909..16 4455 99.9 Minus
Blast to na_te.dros performed on 2015-02-12 16:33:31 has no hits.

BS16476.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:42:16 Download gff for BS16476.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4141-PB 1..893 17..910 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:19:05 Download gff for BS16476.5prime
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RA 368..1271 7..910 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:41:51 Download gff for BS16476.5prime
Subject Subject Range Query Range Percent Splice Strand
Pi3K92E-RA 368..1271 7..910 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:41:51 Download gff for BS16476.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 20632629..20633528 7..910 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:19:05 Download gff for BS16476.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16458351..16459250 7..910 99   Minus

BS16476.pep Sequence

Translation from 16 to 3282

> BS16476.pep
MNMMDNRALAYVAHQPKYETPPEEAEPPCMRFSVNLWKNEMLNWVDLICL
LPNGFLLELRVNPANTIQVIKVEMVNQAKQMPLGYVIKEACEYQVYGIST
FNIEPYTDETKRLSEVQPYFGILSLGERTDTTSFSSDYELTKMVNGMIGT
TFDHNRTHGSPEIDDFRLYMTQTCDNIELERSAYTWQQRLLYEHPLRLAN
STKMPELIRERHPTRTFLIVVKNENDQSTFTLSVNEQDTPFSLTESTLQK
MNRSQMKMNDRTSDYILKVSGRDEYLLGDYPLIQFLYIQEMLSDSAVPNV
VLQSVYRLESYINHHNEQAMVTKRPLPKKRTVHLHKSISSLWDMGNYFQL
TLHSISNVNFDKTRALKVGVHVCLYHGDKKLCAQRSTDSPNGNFDTFLFN
DLVMDFDIQMRNLPRMTRLCIVIFEVTKMSRSKKSSNNKDIALKDVPYNK
NPLAWVNTTIFDHKDILRTGRHTLYTWTYADDIQSVEVFHPLGTIEPNPR
KEECALVDLTFLSSGTGTVRYPSEEVVLQYAADREQVNRLQRQLAGPEKP
IKELKELMANYTGLDKIYEMVDQDRNAIWERRNDILRELPEELSILLHCV
YWKERDDVADMWYLLKQWPLISIERSLELLDYAYPDPAVRRFAIRCLHFL
KDEDLLLYLLQLVQAIKHESYLESDLVVFLLERALRNQRIGHYFFWHLRS
EMQTPSMQTRFGLLLEVYLKGCKHHVAPLRKQLHVLEKLKQGSLIAKKGS
KEKVKTMLQDFLRDQRNSAVFQNIQNPLNPSFRCSGVTPDRCKVMDSKMR
PLWVVFENADVNASDVHIIFKNGDDLRQDMLTLQMLRVMDQLWKRDGMDF
RMNIYNCISMEKSLGMIEVVRHAETIANIQKEKGMFSATSPFKKGSLLSW
LKEHNKPADKLNKAINEFTLSCAGYCVATYVLGVADRHSDNIMVKRNGQL
FHIDFGHILGHFKEKLGVRRERVPFVLTHDFVYVINKGFNDRESKEFCHF
QELCERAFLVLRKHGCLILSLFSMMISTGLPELSSEKDLDYLRETLVLDY
TEEKAREHFRAKFSEALANSWKTSLNWASHNFSKNNKQ*

BS16476.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
Pi3K92E-PC 1088 CG4141-PC 1..1088 1..1088 5735 100 Plus
Pi3K92E-PB 1088 CG4141-PB 1..1088 1..1088 5735 100 Plus
Pi3K92E-PA 1088 CG4141-PA 1..1088 1..1088 5735 100 Plus
Pi3K68D-PD 1876 CG11621-PD 894..1583 386..1084 768 29.8 Plus
Pi3K68D-PA 1876 CG11621-PA 894..1583 386..1084 768 29.8 Plus