Clone Sequence Records
BS16571.3prime Sequence
871 bp (794 high quality bases) assembled on 2007-05-15
> BS16571.3prime
ATGGTCTAGAAAGCTTCTATTTGGAGTTGGCCATCTTGCCCACCGGTGGC
TGCTTGGCCATGATCTCCGCCAGCGTGTTGACGCCCTGCTCGTCGTACTT
CTTCCATTGCGAGTAGTTGATCTGCATGTAGGTGATCAGCTGTGGCATGT
CGATGAAGCTCTCCCAGGCGTGCATCATGTCCTGTATGATGTATTCGATG
AAGCCGATCTGGCTCTTTGGTATGCTGCAGGTGGCCCGATCGAACATCGG
CATCACGATGGGCAGGTGGCGCTGCTTCTCCTCGTCCGTCTGCATGAAGT
ACTCCTCGGCTATGCGGCGGGCCCACTCGATGCAGAATTGCATCGGCCTG
GCGGGATTGCTCACATCGGCCACCTTGATCAGCATGCGACGCATGAGTAT
GGACGTCTCCTCATCCGTTTGGGGATTGTGATCACGCGGCTCCTCGCCGC
CAAAAACGCTCACGAATTTGGCCAGGTGCTCAAAGTGGCGGGTCATCTCG
GTGGCCAGGATCATGTCGATGATGGTGCTGCGTGCCGACTTGTACGTCTC
CTTGTCCAGGTTCTTGAAAATGTTGATCTTGTCGTCGCCCAGTGTTAGCT
TAAAGGTGATTGCCGCGTGATGGTTCTCCAGCACAGTCAGATCATTGTAT
AGAACGGCCAGGGCGTCGTTGGAGTTGCACAAGAAGGCGGATGAGCGACC
AGGATGATCCACATCGTGGGCGGCGGCGGCGATCAAGGCAGTCGCCTCCT
CCATGCGATCCATCACTAGCATATCCTTGTTGGTTAGTTGGGTGATGAAA
GCGCCAGTGGCCTGCATCACATCCGCGGCATGGGTGCTGTTGTGATATGT
GTTGCTCTTGCGGTAGTGGGC
BS16571.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:57:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5411-PC | 1203 | Pde8-RC | 349..1203 | 871..17 | 4100 | 99.1 | Minus |
| CG5411-PD | 2418 | Pde8-RD | 1564..2418 | 871..17 | 4100 | 99.1 | Minus |
| CG5411-PE | 2718 | Pde8-RE | 1864..2718 | 871..17 | 4100 | 99.1 | Minus |
| CG5411-PB | 2715 | Pde8-RB | 1861..2715 | 871..17 | 4100 | 99.1 | Minus |
| CG5411-PA | 2745 | Pde8-RA | 1891..2745 | 871..17 | 4100 | 99.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:53:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pde8-RO | 4895 | CG45019-RO | 2713..3567 | 871..17 | 4170 | 99.2 | Minus |
| Pde8-RK | 5389 | CG45019-RK | 2380..3234 | 871..17 | 4170 | 99.2 | Minus |
| Pde8-RI | 5562 | CG45019-RI | 2553..3407 | 871..17 | 4170 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:53:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23678218..23678489 | 430..159 | 1330 | 99.3 | Minus |
| 2R | 25286936 | 2R | 23677713..23677938 | 813..588 | 1100 | 99.1 | Minus |
| 2R | 25286936 | 2R | 23678001..23678159 | 589..431 | 750 | 98.1 | Minus |
| 2R | 25286936 | 2R | 23678547..23678689 | 159..17 | 715 | 100 | Minus |
| 2R | 25286936 | 2R | 23677594..23677654 | 871..811 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 20:53:16 has no hits.
BS16571.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:57:53 Download gff for
BS16571.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5411-PA | 1891..2745 | 17..871 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:10:58 Download gff for
BS16571.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 2666..3520 | 17..871 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:45 Download gff for
BS16571.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RI | 2553..3407 | 17..871 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:45 Download gff for
BS16571.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23678218..23678488 | 160..430 | 99 | -> | Minus |
| 2R | 23678547..23678689 | 17..159 | 100 | | Minus |
| 2R | 23677715..23677937 | 589..811 | 99 | -> | Minus |
| 2R | 23677594..23677653 | 812..871 | 100 | -> | Minus |
| 2R | 23678002..23678159 | 431..588 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:10:58 Download gff for
BS16571.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19565117..19565176 | 812..871 | 100 | -> | Minus |
| arm_2R | 19565238..19565460 | 589..811 | 99 | -> | Minus |
| arm_2R | 19565525..19565682 | 431..588 | 98 | -> | Minus |
| arm_2R | 19565741..19566011 | 160..430 | 99 | -> | Minus |
| arm_2R | 19566070..19566212 | 17..159 | 100 | | Minus |
BS16571.5prime Sequence
796 bp (717 high quality bases) assembled on 2007-05-15
> BS16571.5prime
GAAGTTATCAGTCGACATGGGCTGTTCTCCGAGTACTTTGCCCCCCGCCC
CTTCCGCTGGTCAGACCGGCGAACGAGGATCCCTGCCGCTGGACGCCTCT
GAAAAGGACGAGAGCCGCCTCTTCTGCATCAAGCTGCGGCGCAGCCGCCT
GCGCCGCTGCAGCTGTGGGGGCGTGACCTTGCAGCCCCCCAGCGACGGGA
ATGGCAGCACGGCCGGAGACAACCTGTGCGGCCAGGTGCTCCTCAATCCG
CTGCAGACCAAGAGCGAGGCCGACTACGAAAAGCTGAGCACCGGCAAAAA
GGACTCGATTGTGACGGTGGCCGCCCTGGGCAACTTTACACACAGCGTAG
TGCGACGGGCCACTGGAAGCACAGGCACATCGGGCACCAGTTCATCCGGC
GGGAACAGCCGTCCAGGTCACCGCAAGTCATCACTAGCCCTCGCTCTCAC
CCCGGAAGATGAGCCGATGGACGTCTACCAGCGAAATCTCATGGACCTGA
AGTATCCAACCGTGCTACCACCGAATCCCCCACTTAAGGCCCTCCTGGTT
TTCCACAAGTCGGACAGCATCTGCGAGGCGATCACCGCGGCCTGCCAGCG
CCACCAGCTGGACGTTACGCTGGTCAAGTCCAAGGAGGAGGCCCTGGACA
CCCTGCAGAAGTCGTACGCCACCGCCCAGTGCTACCACCTAATCATAATT
GATGCGCGCTCCTCCAAGAACCTGGATGCGGAGCACATTGCGAGAACCAT
TCGTCACACACACGGCCACCATTTAACGACAATAATTGCAGTCTGC
BS16571.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:52:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5411-PE | 2718 | Pde8-RE | 1..780 | 17..796 | 3850 | 99.7 | Plus |
| CG5411-PA | 2745 | Pde8-RA | 1..780 | 17..796 | 3850 | 99.7 | Plus |
| CG5411-PD | 2418 | Pde8-RD | 25..453 | 368..796 | 2095 | 99.5 | Plus |
| CG5411-PB | 2715 | Pde8-RB | 323..750 | 369..796 | 2090 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:09:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pde8-RK | 5389 | CG45019-RK | 489..1269 | 16..796 | 3875 | 99.7 | Plus |
| Pde8-RI | 5562 | CG45019-RI | 662..1442 | 16..796 | 3875 | 99.7 | Plus |
| Pde8-RN | 3939 | CG45019-RN | 775..1555 | 16..796 | 3875 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:09:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23665620..23665887 | 16..283 | 1340 | 100 | Plus |
| 2R | 25286936 | 2R | 23674412..23674619 | 537..744 | 1010 | 99 | Plus |
| 2R | 25286936 | 2R | 23671976..23672088 | 369..481 | 565 | 100 | Plus |
| 2R | 25286936 | 2R | 23665949..23666036 | 282..369 | 440 | 100 | Plus |
| 2R | 25286936 | 2R | 23674283..23674343 | 479..539 | 305 | 100 | Plus |
| 2R | 25286936 | 2R | 23674802..23674855 | 743..796 | 270 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 06:09:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 2149..2217 | 107..176 | 113 | 64.3 | Plus |
BS16571.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:52:07 Download gff for
BS16571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5411-PA | 1..780 | 17..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:50:56 Download gff for
BS16571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 775..1555 | 16..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:10:50 Download gff for
BS16571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 775..1555 | 16..796 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:10:50 Download gff for
BS16571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23665620..23665887 | 16..283 | 100 | -> | Plus |
| 2R | 23665951..23666035 | 284..368 | 100 | -> | Plus |
| 2R | 23671976..23672088 | 369..481 | 100 | -> | Plus |
| 2R | 23674286..23674342 | 482..538 | 100 | -> | Plus |
| 2R | 23674414..23674619 | 539..744 | 99 | -> | Plus |
| 2R | 23674804..23674855 | 745..796 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:50:56 Download gff for
BS16571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19553143..19553410 | 16..283 | 100 | -> | Plus |
| arm_2R | 19553474..19553558 | 284..368 | 100 | -> | Plus |
| arm_2R | 19559499..19559611 | 369..481 | 100 | -> | Plus |
| arm_2R | 19561809..19561865 | 482..538 | 100 | -> | Plus |
| arm_2R | 19561937..19562142 | 539..744 | 99 | -> | Plus |
| arm_2R | 19562327..19562378 | 745..796 | 100 | | Plus |
BS16571.complete Sequence
2777 bp assembled on 2010-05-10
GenBank Submission: KX801086
> BS16571.complete
GAAGTTATCAGTCGACATGGGCTGTTCTCCGAGTACTTTGCCCCCCGCCC
CTTCCGCTGGTCAGACCGGCGAACGAGGATCCCTGCCGCTGGACGCCTCT
GAAAAGGACGAGAGCCGCCTCTTCTGCATCAAGCTGCGGCGCAGCCGCCT
GCGCCGCTGCAGCTGTGGGGGCGTGACCTTGCAGCCCCCCAGCGACGGGA
ATGGCAGCACGGCCGGAGACAACCTGTGCGGCCAGGTGCTCCTCAATCCG
CTGCAGACCAAGAGCGAGGCCGACTACGAAAAGCTGAGCACCGGCAAAAA
GGACTCGATTGTGACGGTGGCCGCCCTGGGCAACTTTACACACAGCGTAG
TGCGACGGGCCACTGGAAGCACAGGCACATCGGGCACCAGTTCATCCGGC
GGGAACAGCCGTCCAGGTCACCGCAAGTCATCACTAGCCCTCGCTCTCAC
CCCGGAAGATGAGCCGATGGACGTCTACCAGCGAAATCTCATGGACCTGA
AGTATCCAACCGTGCTACCACCGAATCCCCCACTTAAGGCCCTCCTGGTT
TTCCACAAGTCGGACAGCATCTGCGAGGCGATCACCGCGGCCTGCCAGCG
CCACCAGCTGGACGTTACGCTGGTCAAGTCCAAGGAGGAGGCCCTGGACA
CCCTGCAGAAGTCGTACGCCACCGCCCAGTGCTACCACCTAATCATAATT
GATGCGCGCTCCTCCAAGAACCTGGATGCGGAGCACATTGCGAGAACCAT
TCGTCACACACACGGCCACCATTTAACGACAATAATTGCAGTCTGCAAGA
AGAGTTTCTTCGAAAAGGATGATGTGCTAATTGCTCTATTGGACGCTGGC
GTTAATAGATGCGTAGCGGAGACGACCAACCTGGCCATGTGCAGTGTGGA
ACTGAAGCAGATACTGCACTCCATCATCCGGCCGCACAATGTCATGTCCA
CTCAACAGGCCCTCTACACGGCTCTGCATCGGCTAAAGGAGGTGGTGCTC
ATCACGGACGACTTGCTGCGGATTCAGTACGCGAACCGTGCCACCGAGAG
GCTGCTCAACATGCGGCTGGACGAGATCATTAGCAAGCAGCTGGAGGACA
TATTCGTGTCGGACCTCTCCACCATCAGCGAGCAGTGCAAGAACATCAAG
GAGTTCGATGGCATTCTGACGGTGCGTCGCAAGAGCCAGGAGGGCATACC
CATGCACGTGCGCGTCGTGCCGGTGGCCTGCATAGGCAGCGCCCCCACGC
ACCTGATTTTCAACTTTGATGTGCCCGGCGGGCAGATGGACTTCATAGCC
ACGCTGCCGCAGCCCAAGGAGGCGCCTCGGGGCTCCCTGCACTCGGTGCG
GCGCTGCAGCTTTGATGTCCGCTCCATCGCCTCGGACGGATTGCGGAGGA
CGAGCTTGGCCAAGCTGACGTCGCTGCCACTGGAGGCACCCATCACTAAA
ATAATTAATTTACTATCACAAGTACAGGAGAATTGTTCGGCCGATGAGGC
GCGTCTCATAGACAAGGTCTTGGAGTTCCTGAAGCGTGAGGGACTCTACA
GTCCGCAGATGAAGGAGATACGAACGGACGATCCCATAGCCACCGATCTA
ATCGGTGCCCTGCTAACGGGTCCCAGCGTGTACTCATCGCGCCGCAGCTC
GAATGACTCCATCATACGCACTGGCAGCTCCACGAGAACTGCCGCCATTG
TGCCCGCCAAAATGAAGTCCAATCCCATCATCATGGAACTACTTGACGAA
TCTCTCAGCTGGGACTTTGATATTTTCAAATTGGAGGAGATCACCGACTA
CCACCCGCTGCTCTACCTGGGCATGGAGATGTTCCGCCGCTTCGACGTCT
TTGCCACCCTGAACATCGATGAGAACGTGTGCAAGGCGTGGTTGGCAGTG
ATCGAAGCCCACTACCGCAAGAGCAACACATATCACAACAGCACCCATGC
CGCGGATGTGATGCAGGCCACTGGCGCTTTCATCACCCAACTAACCAACA
AGGATATGCTAGTGATGGATCGCATGGAGGAGGCGACTGCCTTGATCGCC
GCCGCCGCCCACGATGTGGATCATCCTGGTCGCTCATCCGCCTTCTTGTG
CAACTCCAACGACGCCCTGGCCGTTCTATACAATGATCTGACTGTGCTGG
AGAACCATCACGCGGCAATCACCTTTAAGCTAACACTGGGCGACGACAAG
ATCAACATTTTCAAGAACCTGGACAAGGAGACGTACAAGTCGGCACGCAG
CACCATCATCGACATGATCCTGGCCACCGAGATGACCCGCCACTTTGAGC
ACCTGGCCAAATTCGTGAGCGTTTTTGGCGGCGAGGAGCCGCGTGATCAC
AATCCCCAAACGGATGAGGAGACGTCCATACTCATGCGTCGCATGCTGAT
CAAGGTGGCCGATGTGAGCAATCCCGCCAGGCCGATGCAATTCTGCATCG
AGTGGGCCCGCCGCATAGCCGAGGAGTACTTCATGCAGACGGACGAGGAG
AAGCAGCGCCACCTGCCCATCGTGATGCCGATGTTCGATCGGGCCACCTG
CAGCATACCAAAGAGCCAGATCGGCTTCATCGAATACATCATACAGGACA
TGATGCACGCCTGGGAGAGCTTCATCGACATGCCACAGCTGATCACCTAC
ATGCAGATCAACTACTCGCAATGGAAGAAGTACGACGAGCAGGGCGTCAA
CACGCTGGCGGAGATCATGGCCAAGCAGCCACCGGTGGGCAAGATGGCCA
ACTCCAAATAGAAGCTTTCTAGACCAT
BS16571.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:57:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pde8-RK | 2745 | CG45019-PK | 1..2745 | 17..2761 | 13530 | 99.5 | Plus |
| Pde8-RI | 2745 | CG45019-PI | 1..2745 | 17..2761 | 13530 | 99.5 | Plus |
| Pde8-RN | 2850 | CG45019-PN | 1..2745 | 17..2761 | 13530 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pde8-RK | 5389 | CG45019-RK | 489..3234 | 16..2761 | 13535 | 99.5 | Plus |
| Pde8-RI | 5562 | CG45019-RI | 662..3407 | 16..2761 | 13535 | 99.5 | Plus |
| Pde8-RN | 3939 | CG45019-RN | 775..3520 | 16..2761 | 13535 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:57:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23665620..23665887 | 16..283 | 1340 | 100 | Plus |
| 2R | 25286936 | 2R | 23678218..23678489 | 2348..2619 | 1330 | 99.3 | Plus |
| 2R | 25286936 | 2R | 23677403..23677654 | 1716..1967 | 1245 | 99.6 | Plus |
| 2R | 25286936 | 2R | 23677713..23677938 | 1965..2190 | 1100 | 99.1 | Plus |
| 2R | 25286936 | 2R | 23675775..23675988 | 1237..1450 | 1070 | 100 | Plus |
| 2R | 25286936 | 2R | 23674412..23674619 | 537..744 | 1010 | 99 | Plus |
| 2R | 25286936 | 2R | 23677021..23677189 | 1451..1619 | 830 | 99.4 | Plus |
| 2R | 25286936 | 2R | 23675538..23675708 | 1069..1239 | 825 | 98.8 | Plus |
| 2R | 25286936 | 2R | 23678001..23678159 | 2189..2347 | 750 | 98.1 | Plus |
| 2R | 25286936 | 2R | 23678547..23678689 | 2619..2761 | 715 | 100 | Plus |
| 2R | 25286936 | 2R | 23675352..23675466 | 956..1070 | 575 | 100 | Plus |
| 2R | 25286936 | 2R | 23671976..23672088 | 369..481 | 565 | 100 | Plus |
| 2R | 25286936 | 2R | 23675107..23675206 | 860..959 | 500 | 100 | Plus |
| 2R | 25286936 | 2R | 23677248..23677347 | 1618..1717 | 500 | 100 | Plus |
| 2R | 25286936 | 2R | 23665949..23666036 | 282..369 | 440 | 100 | Plus |
| 2R | 25286936 | 2R | 23674802..23674863 | 743..804 | 310 | 100 | Plus |
| 2R | 25286936 | 2R | 23674283..23674343 | 479..539 | 305 | 100 | Plus |
| 2R | 25286936 | 2R | 23674929..23674985 | 803..859 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:57:53 has no hits.
BS16571.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-10 11:55:58 Download gff for
BS16571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RA | 767..3505 | 17..2755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:52 Download gff for
BS16571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 776..3514 | 17..2755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:24 Download gff for
BS16571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pde8-RN | 776..3514 | 17..2755 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:24 Download gff for
BS16571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23678547..23678683 | 2619..2755 | 100 | | Plus |
| 2R | 23677405..23677653 | 1718..1966 | 99 | -> | Plus |
| 2R | 23677715..23677937 | 1967..2189 | 99 | -> | Plus |
| 2R | 23678002..23678159 | 2190..2347 | 98 | -> | Plus |
| 2R | 23678218..23678488 | 2348..2618 | 99 | -> | Plus |
| 2R | 23665621..23665887 | 17..283 | 100 | -> | Plus |
| 2R | 23665951..23666035 | 284..368 | 100 | -> | Plus |
| 2R | 23671976..23672088 | 369..481 | 100 | -> | Plus |
| 2R | 23674286..23674342 | 482..538 | 100 | -> | Plus |
| 2R | 23674414..23674619 | 539..744 | 99 | -> | Plus |
| 2R | 23674804..23674863 | 745..804 | 100 | -> | Plus |
| 2R | 23674931..23674985 | 805..859 | 100 | -> | Plus |
| 2R | 23675107..23675205 | 860..958 | 100 | -> | Plus |
| 2R | 23675355..23675465 | 959..1069 | 100 | -> | Plus |
| 2R | 23675539..23675708 | 1070..1239 | 98 | -> | Plus |
| 2R | 23675778..23675988 | 1240..1450 | 100 | -> | Plus |
| 2R | 23677021..23677188 | 1451..1618 | 99 | -> | Plus |
| 2R | 23677249..23677347 | 1619..1717 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:52 Download gff for
BS16571.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19563301..19563511 | 1240..1450 | 100 | -> | Plus |
| arm_2R | 19562454..19562508 | 805..859 | 100 | -> | Plus |
| arm_2R | 19562630..19562728 | 860..958 | 100 | -> | Plus |
| arm_2R | 19562878..19562988 | 959..1069 | 100 | -> | Plus |
| arm_2R | 19564544..19564711 | 1451..1618 | 99 | -> | Plus |
| arm_2R | 19563062..19563231 | 1070..1239 | 98 | -> | Plus |
| arm_2R | 19564772..19564870 | 1619..1717 | 100 | -> | Plus |
| arm_2R | 19553144..19553410 | 17..283 | 100 | -> | Plus |
| arm_2R | 19553474..19553558 | 284..368 | 100 | -> | Plus |
| arm_2R | 19559499..19559611 | 369..481 | 100 | -> | Plus |
| arm_2R | 19561809..19561865 | 482..538 | 100 | -> | Plus |
| arm_2R | 19561937..19562142 | 539..744 | 99 | -> | Plus |
| arm_2R | 19562327..19562386 | 745..804 | 100 | -> | Plus |
| arm_2R | 19564928..19565176 | 1718..1966 | 99 | -> | Plus |
| arm_2R | 19565238..19565460 | 1967..2189 | 99 | -> | Plus |
| arm_2R | 19565525..19565682 | 2190..2347 | 98 | -> | Plus |
| arm_2R | 19565741..19566011 | 2348..2618 | 99 | -> | Plus |
| arm_2R | 19566070..19566206 | 2619..2755 | 100 | | Plus |
BS16571.pep Sequence
Translation from 16 to 2760
> BS16571.pep
MGCSPSTLPPAPSAGQTGERGSLPLDASEKDESRLFCIKLRRSRLRRCSC
GGVTLQPPSDGNGSTAGDNLCGQVLLNPLQTKSEADYEKLSTGKKDSIVT
VAALGNFTHSVVRRATGSTGTSGTSSSGGNSRPGHRKSSLALALTPEDEP
MDVYQRNLMDLKYPTVLPPNPPLKALLVFHKSDSICEAITAACQRHQLDV
TLVKSKEEALDTLQKSYATAQCYHLIIIDARSSKNLDAEHIARTIRHTHG
HHLTTIIAVCKKSFFEKDDVLIALLDAGVNRCVAETTNLAMCSVELKQIL
HSIIRPHNVMSTQQALYTALHRLKEVVLITDDLLRIQYANRATERLLNMR
LDEIISKQLEDIFVSDLSTISEQCKNIKEFDGILTVRRKSQEGIPMHVRV
VPVACIGSAPTHLIFNFDVPGGQMDFIATLPQPKEAPRGSLHSVRRCSFD
VRSIASDGLRRTSLAKLTSLPLEAPITKIINLLSQVQENCSADEARLIDK
VLEFLKREGLYSPQMKEIRTDDPIATDLIGALLTGPSVYSSRRSSNDSII
RTGSSTRTAAIVPAKMKSNPIIMELLDESLSWDFDIFKLEEITDYHPLLY
LGMEMFRRFDVFATLNIDENVCKAWLAVIEAHYRKSNTYHNSTHAADVMQ
ATGAFITQLTNKDMLVMDRMEEATALIAAAAHDVDHPGRSSAFLCNSNDA
LAVLYNDLTVLENHHAAITFKLTLGDDKINIFKNLDKETYKSARSTIIDM
ILATEMTRHFEHLAKFVSVFGGEEPRDHNPQTDEETSILMRRMLIKVADV
SNPARPMQFCIEWARRIAEEYFMQTDEEKQRHLPIVMPMFDRATCSIPKS
QIGFIEYIIQDMMHAWESFIDMPQLITYMQINYSQWKKYDEQGVNTLAEI
MAKQPPVGKMANSK*
BS16571.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:19:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pde8-PK | 914 | CG45019-PK | 1..914 | 1..914 | 4699 | 100 | Plus |
| Pde8-PI | 914 | CG45019-PI | 1..914 | 1..914 | 4699 | 100 | Plus |
| Pde8-PN | 949 | CG45019-PN | 1..914 | 1..914 | 4699 | 100 | Plus |
| Pde8-PA | 914 | CG45019-PA | 1..914 | 1..914 | 4699 | 100 | Plus |
| Pde8-PE | 905 | CG45019-PE | 1..905 | 1..914 | 4639 | 99 | Plus |
