Clone BS16585 Report

Search the DGRC for BS16585

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:165
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG2658-RB
Protein status:BS16585.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16585.3prime Sequence

923 bp (788 high quality bases) assembled on 2007-05-15

> BS16585.3prime
ATGGTCTAGAAAGCTTTCAAATGATTGGCTTGTTCCGAACCTTGTCTAGG
ATATCAGCTCGATTCGTACTGGCCAACATCAGCACGCCCTCCTTGGTGGC
CATACCGTCCATCTCGACCAGCAGCTGATTAAGCGTCTGCTCCGATTCGC
CAGAGCTGCCCTGTCCCATGCTTTCAGTTCCCGAACGTTGCCGACCGATG
GCGTCTATCTCATCGATGTAAATGATGCATGGCGCCCGTTTTTTGCCTTC
CTTAAACAGATCACGCACTCGCGCGGCCCCCAGACCGCCAATCATCTCGA
TGAACTCGGAGCCGTTCATGCTGAGAAACGGCACCTGGGCCTCGGTGGCG
ACCGCCTTGGCCAGTAGCGTCTTGCCGCATCCTGGTGGACCCAGGAGTAG
GGCTCCTCGCGGCACCTTGGCGCCCAGCCGCTGGTACTTCTCCGGCGACT
TGAGGTAATCTACAAATTCCTTCACCTCCTGTTTCGCCTCACTGAGACCG
GCCACGTCCCGGAAAAGCACACCGCGACCGCCATCGAAAGGATCAACTAG
CGTGAACTTGGCACGGCCCATTTGGTTAAATGAATCCATGCTGAGCGGGC
TCTTGATGCTCTTCATGCGGGTGGCAATCGACATAAGCAGAGCGCAGACG
AGAAGCAGCATGAGAATACGTCCGGTGGTGTCCGTCTGCCGGTCGTAGGT
CACCGGCACACCATCCTTGATGCCCAAACGCTTCTCCACATCACGCAGCT
TCTCCTCAAACTTGTTGGCATCGGCCACCGCCATGTGAAAGATGGTGGAA
GACACCTTCCGACCCTTGATGACGGCTCCCTCGTGCAGAATGATGGTCAC
CATTTCCATGTCGGGTCTGATGATCAGCTCCTTGACTTCGCCCACGGCCA
GCATGTGGTGCACAAACTCCTTT

BS16585.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG2658-PB 1515 CG2658-RB 613..1515 919..17 4490 99.8 Minus
CG2658-PA 2460 CG2658-RA 613..1492 919..40 4375 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG2658-RC 3360 CG2658-RC 841..1720 919..40 4385 99.9 Minus
CG2658-RA 3029 CG2658-RA 841..1720 919..40 4385 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2696297..2696857 17..577 2805 100 Plus
X 23542271 X 2696916..2697257 578..919 1695 99.7 Plus
Blast to na_te.dros performed on 2015-02-11 02:24:22 has no hits.

BS16585.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:55:26 Download gff for BS16585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2658-PB 609..1515 17..923 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:59:47 Download gff for BS16585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2658-RA 837..1722 36..923 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:03:34 Download gff for BS16585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2658-RA 837..1722 36..923 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:03:34 Download gff for BS16585.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2696916..2697260 578..923 99   Plus
X 2696293..2696857 11..577 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:59:47 Download gff for BS16585.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2590326..2590890 11..577 99 <- Plus
arm_X 2590949..2591293 578..923 99   Plus

BS16585.5prime Sequence

867 bp (790 high quality bases) assembled on 2007-05-15

> BS16585.5prime
GAAGTTATCAGTCGACATGTTGAAGGGCCTGCGGCATGTGCGGAATGCGC
TGCAGCGCGGTGGATCTCAGCTGATCCAGCTCCGCAGTGCCACAGGACAA
CCCCCAAGGATTGGGCGGGAACTGTCGCTCCTTCAGCTCAGCCGGCGGCA
GGTGATGCAGCTGCAGGCGGAGTACAAGGCAATTGTGGGCCTAATAGCGC
GCTCCCTGCAGCTGACTCCCAAGGAGGTTAGACTGATGCACCTGCGCAGC
CTGAGCAGCACCGCAAAACCTCCTACCGCTTCGGATGGCAAGACGGAAAA
GCATGAACAGCCCGAGAAGGGCAGTGCCAAGGCTAAAGATGATTCGTCGA
AGGAGAAAAAGTCAGCTGTCGCGGCGGAGGATGGCGATAAGAGCAGCAGA
GCGGCAGGAGAGGAGGCCGCCAGTACTCCTACTTCTAGCAGTACCATTGG
TGAGCCCGGCGAAGATCCCAACAAAAACAGCAACGAGAATGACGAAAAGA
TGCGTTCTGTACTGACTAAGGCCGTACTGTGGCTCTTTACCATCTACATG
TTTGTGGCCTTCTTTTCCCTGCTAATTACTCCGCGCTCCGAGAGACCAGA
GGGTTCCACGCGCTATGTGTCGTGGAACGAGTTCGTGCACCACATGCTGG
CCGTGGGCGAAGTCAAGGAGCTGATCATCAGACCCGACATGGAAATGGTG
ACCATCATTCTGCACGAGGGAGCCGTCATCAAGGGTCGGAAGGTGTCTTC
CACCATCTTTCACATGGCGGTGGCCGATGCCAACAAGTTTGAGGAGAAGC
TGCGTGATGTGGAGAAGCGTTTGGGCATCAAGGATGGTGTGCCGGTGACC
TACGACCGGCAGACGGA

BS16585.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:49:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG2658-PA 2460 CG2658-RA 1..851 17..867 4255 100 Plus
CG2658-PB 1515 CG2658-RB 1..851 17..867 4255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG2658-RC 3360 CG2658-RC 229..1079 17..867 4255 100 Plus
CG2658-RA 3029 CG2658-RA 229..1079 17..867 4255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:36:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2697338..2697790 602..150 2265 100 Minus
X 23542271 X 2697019..2697286 867..600 1340 100 Minus
X 23542271 X 2697847..2697983 153..17 685 100 Minus
Blast to na_te.dros performed on 2015-02-12 05:36:21 has no hits.

BS16585.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:49:55 Download gff for BS16585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2658-PB 1..850 17..866 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:44:34 Download gff for BS16585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2658-RA 229..1078 17..866 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:39:50 Download gff for BS16585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2658-RA 229..1078 17..866 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:39:50 Download gff for BS16585.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2697339..2697788 152..601 100 <- Minus
X 2697849..2697983 17..151 100   Minus
X 2697020..2697284 602..866 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:44:34 Download gff for BS16585.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2591053..2591317 602..866 100 <- Minus
arm_X 2591372..2591821 152..601 100 <- Minus
arm_X 2591882..2592016 17..151 100   Minus

BS16585.complete Sequence

1547 bp assembled on 2007-05-07

GenBank Submission: FJ638166

> BS16585.complete
GAAGTTATCAGTCGACATGTTGAAGGGCCTGCGGCATGTGCGGAATGCGC
TGCAGCGCGGTGGATCTCAGCTGATCCAGCTCCGCAGTGCCACAGGACAA
CCCCCAAGGATTGGGCGGGAACTGTCGCTCCTTCAGCTCAGCCGGCGGCA
GGTGATGCAGCTGCAGGCGGAGTACAAGGCAATTGTGGGCCTAATAGCGC
GCTCCCTGCAGCTGACTCCCAAGGAGGTTAGACTGATGCACCTGCGCAGC
CTGAGCAGCACCGCAAAACCTCCTACCGCTTCGGATGGCAAGACGGAAAA
GCATGAACAGCCCGAGAAGGGCAGTGCCAAGGCTAAAGATGATTCGTCGA
AGGAGAAAAAGTCAGCTGTCGCGGCGGAGGATGGCGATAAGAGCAGCAGA
GCGGCAGGAGAGGAGGCCGCCAGTACTCCTACTTCTAGCAGTACCATTGG
TGAGCCCGGCGAAGATCCCAACAAAAACAGCAACGAGAATGACGAAAAGA
TGCGTTCTGTACTGACTAAGGCCGTACTGTGGCTCTTTACCATCTACATG
TTTGTGGCCTTCTTTTCCCTGCTAATTACTCCGCGCTCCGAGAGACCAGA
GGGTTCCACGCGCTATGTGTCGTGGAACGAGTTCGTGCACCACATGCTGG
CCGTGGGCGAAGTCAAGGAGCTGATCATCAGACCCGACATGGAAATGGTG
ACCATCATTCTGCACGAGGGAGCCGTCATCAAGGGTCGGAAGGTGTCTTC
CACCATCTTTCACATGGCGGTGGCCGATGCCAACAAGTTTGAGGAGAAGC
TGCGTGATGTGGAGAAGCGTTTGGGCATCAAGGATGGTGTGCCGGTGACC
TACGACCGGCAGACGGACACCACCGGACGTATTCTCATGCTGCTTCTCGT
CTGCGCTCTGCTTATGTCGATTGCCACCCGCATGAAGAGCATCAAGAGCC
CGCTCAGCATGGATTCATTTAACCAAATGGGCCGTGCCAAGTTCACGCTA
GTTGATCCTTTCGATGGCGGTCGCGGTGTGCTTTTCCGGGACGTGGCCGG
TCTCAGTGAGGCGAAACAGGAGGTGAAGGAATTTGTAGATTACCTCAAGT
CGCCGGAGAAGTACCAGCGGCTGGGCGCCAAGGTGCCGCGAGGAGCCCTA
CTCCTGGGTCCACCAGGATGCGGCAAGACGCTACTGGCCAAGGCGGTCGC
CACCGAGGCCCAGGTGCCGTTTCTCAGCATGAACGGCTCCGAGTTCATCG
AGATGATTGGCGGTCTGGGGGCCGCGCGAGTGCGTGATCTGTTTAAGGAA
GGCAAAAAACGGGCGCCATGCATCATTTACATCGATGAGATAGACGCCAT
CGGTCGGCAACGTTCGGGAACTGAAAGCATGGGACAGGGCAGCTCTGGCG
AATCGGAGCAGACGCTTAATCAGCTGCTGGTCGAGATGGACGGTATGGCC
ACCAAGGAGGGCGTGCTGATGTTGGCCAGTACGAATCGAGCTGATATCCT
AGACAAGGTTCGGAACAAGCCAATCATTTGAAAGCTTTCTAGACCAT

BS16585.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:47:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG2658-RC 2460 CG2658-PC 1..1492 17..1508 7460 100 Plus
CG2658-RA 2460 CG2658-PA 1..1492 17..1508 7460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:47:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG2658-RC 3360 CG2658-RC 229..1720 17..1508 7460 100 Plus
CG2658-RA 3029 CG2658-RA 229..1720 17..1508 7460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2696297..2696857 1531..971 2805 100 Minus
X 23542271 X 2697338..2697790 602..150 2265 100 Minus
X 23542271 X 2696916..2697286 970..600 1855 100 Minus
X 23542271 X 2697847..2697983 153..17 685 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:47:48 has no hits.

BS16585.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:30:37 Download gff for BS16585.complete
Subject Subject Range Query Range Percent Splice Strand
CG2658-RB 1..1515 17..1531 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:02:46 Download gff for BS16585.complete
Subject Subject Range Query Range Percent Splice Strand
CG2658-RB 225..1743 17..1537 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:10 Download gff for BS16585.complete
Subject Subject Range Query Range Percent Splice Strand
CG2658-RA 234..1722 22..1512 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:30:38 Download gff for BS16585.complete
Subject Subject Range Query Range Percent Splice Strand
CG2658-RB 225..1743 17..1537 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:31:58 Download gff for BS16585.complete
Subject Subject Range Query Range Percent Splice Strand
CG2658-RA 234..1722 22..1512 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:31:58 Download gff for BS16585.complete
Subject Subject Range Query Range Percent Splice Strand
X 2696298..2696857 971..1530 100 <- Minus
X 2696916..2697284 602..970 100 <- Minus
X 2697339..2697788 152..601 100 <- Minus
X 2697849..2697978 22..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:10 Download gff for BS16585.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2590331..2590890 971..1530 100 <- Minus
arm_X 2590949..2591317 602..970 100 <- Minus
arm_X 2591372..2591821 152..601 100 <- Minus
arm_X 2591882..2592011 22..151 100   Minus

BS16585.pep Sequence

Translation from 16 to 1530

> BS16585.pep
MLKGLRHVRNALQRGGSQLIQLRSATGQPPRIGRELSLLQLSRRQVMQLQ
AEYKAIVGLIARSLQLTPKEVRLMHLRSLSSTAKPPTASDGKTEKHEQPE
KGSAKAKDDSSKEKKSAVAAEDGDKSSRAAGEEAASTPTSSSTIGEPGED
PNKNSNENDEKMRSVLTKAVLWLFTIYMFVAFFSLLITPRSERPEGSTRY
VSWNEFVHHMLAVGEVKELIIRPDMEMVTIILHEGAVIKGRKVSSTIFHM
AVADANKFEEKLRDVEKRLGIKDGVPVTYDRQTDTTGRILMLLLVCALLM
SIATRMKSIKSPLSMDSFNQMGRAKFTLVDPFDGGRGVLFRDVAGLSEAK
QEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQV
PFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRS
GTESMGQGSSGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKVRN
KPII*

BS16585.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2658-PC 819 CG2658-PC 1..502 1..502 2490 99.2 Plus
CG2658-PA 819 CG2658-PA 1..502 1..502 2490 99.2 Plus
CG6512-PA 826 CG6512-PA 91..486 97..502 552 35.9 Plus
CG6512-PB 697 CG6512-PB 59..357 201..502 544 41.6 Plus
CG3499-PB 736 CG3499-PB 297..456 338..502 447 55.2 Plus