Clone BS16594 Report

Search the DGRC for BS16594

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:165
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG31798-RA
Protein status:BS16594.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16594.3prime Sequence

893 bp (852 high quality bases) assembled on 2007-05-15

> BS16594.3prime
ATGGTCTAGAAAGCTTTTAGATATCTCCCTCAGCCAGTTTGAATGTCTTG
AGATCGATATCGTCATAGGGAGCCACATCGTGACCAGGATCCTCCTTCTC
CTCATCCAGCAGACAGTATATGCTATCCGTTTCCTGTTTGATGATCTCGT
CACCCAGTCGCTTCCAAAAAGGACGACAGCGGTTCTTCCACTGACGCAGG
TTGAAAAAGGCGCAATAGCGAGTGGTAGACGACTTAAGCATGGCCATATA
AAGTGGTGTGATTTCATCCGCCATTAACTTGGCCTGCAGATAGTTGGCCA
TCTTGCGGCTGTGCAGATCGTTAAAGTCGACGTAGATGCGCTTGGCATGC
TCATAGCATTTCTTAGCGATACTTGTCATCTGTGTGTCCTTGGCAAAGAT
CTTTCCCAGATGCAAAAGTATCTCTGCCTCCAAATCGCGGTGGGTATAGA
GTCGGGATAAGCGAAGAGCTCTCTTGTAACACGAAGTGGCCTTCTCCACG
TGCTCAAAAATCTCGGAACATTGCCCTTGGATCAGGTAGTACTTAATGTT
GAGCTTAACGAATCGATATTCGGTGCAGGCCAGGATCTGGGTTTTGATCT
GCTCAAGGCACTGCTGCGCCGAGTTAAAGTTACCAATCTCCATTAGAAAG
TAGGCACGCTCCAGAAAAGTGTCACAGAAAATCTCCATGTTCTTATCCCT
GCCAATTTCGGCTATTAGTACAGTGGCTCGTCGGGCCATGGCCACCGCAT
CCTCGGGATGCTGGCGTACAATGGACTTGCCCTGGATGAGGAGCTGCCTG
GCGAGATTCTGGGCCACCAGCTCGTGGAGCGTAAGACTGCCTGCGGGCAT
TCCCACCTCGGCGGTCCACACGTGACCACGCACCAGATCCATG

BS16594.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-PA 1476 CG31798-RA 600..1476 893..17 4385 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1643 CG31798-RB 669..1545 893..17 4385 100 Minus
CG31798-RA 1913 CG31798-RA 669..1545 893..17 4385 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19395323..19395822 516..17 2470 99.6 Minus
2L 23513712 2L 19395076..19395271 705..510 980 100 Minus
2L 23513712 2L 19394828..19395015 893..706 940 100 Minus
Blast to na_te.dros performed on 2015-02-13 05:58:37 has no hits.

BS16594.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:58:35 Download gff for BS16594.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-PA 600..1476 17..893 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:47:21 Download gff for BS16594.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 669..1548 11..893 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:04:44 Download gff for BS16594.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 669..1548 11..893 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:04:44 Download gff for BS16594.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19394828..19395015 706..893 100 -> Minus
2L 19395076..19395271 510..705 100 -> Minus
2L 19395330..19395825 11..509 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:47:21 Download gff for BS16594.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19394828..19395015 706..893 100 -> Minus
arm_2L 19395076..19395271 510..705 100 -> Minus
arm_2L 19395330..19395825 11..509 99   Minus

BS16594.5prime Sequence

824 bp (797 high quality bases) assembled on 2007-05-15

> BS16594.5prime
GAAGTTATCAGTCGACATGTCCTTGCAGTGGCAAAATGAGGTGGTGCGGA
TTACGCGCCAAGTGAAGCGCAATCTACCGCACCGAAATTTCCGAGAGATT
AACTTTGATCGCGAGACCATAAGGCAAGGAATCACCCCCCTGACCTACGA
TGAGGCGCGCCGTCTTAAGGGACCAGTTTTCGAGGCTCTGGAGGATGAGT
TGCGTCGAGCAGGATGCACCATGCTGCCGGAGTTTCTCCACTGCCTGGCC
ACCAAGGAGAATGCTCTTTTCGAGAGCCTAAATATCCGGGAACGTCTATC
CGATGACTCGGAATTGCTCTACGGAATGGTGGATCGACTCCGGGATGCCG
AACTGGCTGTTTGCCTGAACAAGCACCGGGGTCTCAAAAAGTGTTTTGGC
CTATTCTTCGAGACCATGCAGCTGCTGGAGCCGTATCGTCAGAAATACGC
ATACGCCCTGGTGGCCCTCAATGAGCACATCATCTCGTTGTGCCGCAACA
TTGCCGGCCAGGAACATGATGCCGCCGAGTACATATCCCGCATCTACTAC
ATCTATTCCATGTACCTGGTGAACACAGGCCAGCGAACCTCGGCCATCAA
TTTCCTACAAATTGCCATGGATCTGGTGCGTGGTCACGTGTGGACCGCCG
AGGTGGGAATGCCCGCAGGCAGTCTTACGCTCCACGAGCTGGTGGCCCAG
AATCTCGCCAGGCAGCTCCTCATCCAGGGCAAGTCCATTGTACGCCAGCA
TCCCGAGGATGCGGTGGCCATGGCCCGACGAGCCACTGTACTAATAGCCG
AAATTGGCAGGGATAAGAACATGG

BS16594.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-PA 1476 CG31798-RA 1..808 17..824 4040 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1643 CG31798-RB 69..877 16..824 4045 100 Plus
CG31798-RA 1913 CG31798-RA 69..877 16..824 4045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 21:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19394228..19395015 16..803 3940 100 Plus
Blast to na_te.dros performed on 2015-02-04 21:04:20 has no hits.

BS16594.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:52:36 Download gff for BS16594.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-PA 1..808 17..824 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:38:45 Download gff for BS16594.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..877 10..824 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 00:38:54 Download gff for BS16594.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..877 10..824 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 00:38:54 Download gff for BS16594.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19394224..19395015 10..803 99 -> Plus
2L 19395076..19395096 804..824 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:38:45 Download gff for BS16594.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19394224..19395015 10..803 99 -> Plus
arm_2L 19395076..19395096 804..824 100   Plus

BS16594.complete Sequence

1508 bp assembled on 2007-05-07

GenBank Submission: FJ638167

> BS16594.complete
GAAGTTATCAGTCGACATGTCCTTGCAGTGGCAAAATGAGGTGGTGCGGA
TTACGCGCCAAGTGAAGCGCAATCTACCGCACCGAAATTTCCGAGAGATT
AACTTTGATCGCGAGACCATAAGGCAAGGAATCACCCCCCTGACCTACGA
TGAGGCGCGCCGTCTTAAGGGACCAGTTTTCGAGGCTCTGGAGGATGAGT
TGCGTCGAGCAGGATGCACCATGCTGCCGGAGTTTCTCCACTGCCTGGCC
ACCAAGGAGAATGCTCTTTTCGAGAGCCTAAATATCCGGGAACGTCTATC
CGATGACTCGGAATTGCTCTACGGAATGGTGGATCGACTCCGGGATGCCG
AACTGGCTGTTTGCCTGAACAAGCACCGGGGTCTCAAAAAGTGTTTTGGC
CTATTCTTCGAGACCATGCAGCTGCTGGAGCCGTATCGTCAGAAATACGC
ATACGCCCTGGTGGCCCTCAATGAGCACATCATCTCGTTGTGCCGCAACA
TTGCCGGCCAGGAACATGATGCCGCCGAGTACATATCCCGCATCTACTAC
ATCTATTCCATGTACCTGGTGAACACAGGCCAGCGAACCTCGGCCATCAA
TTTCCTACAAATTGCCATGGATCTGGTGCGTGGTCACGTGTGGACCGCCG
AGGTGGGAATGCCCGCAGGCAGTCTTACGCTCCACGAGCTGGTGGCCCAG
AATCTCGCCAGGCAGCTCCTCATCCAGGGCAAGTCCATTGTACGCCAGCA
TCCCGAGGATGCGGTGGCCATGGCCCGACGAGCCACTGTACTAATAGCCG
AAATTGGCAGGGATAAGAACATGGAGATTTTCTGTGACACTTTTCTGGAG
CGTGCCTACTTTCTAATGGAGATTGGTAACTTTAACTCGGCGCAGCAGTG
CCTTGAGCAGATCAAAACCCAGATCCTGGCCTGCACCGAATATCGATTCG
TTAAGCTCAACATTAAGTACTACCTGATCCAAGGGCAATGTTCCGAGATT
TTTGAGCACGTGGAGAAGGCCACTTCGTGTTACAAGAGAGCTCTTCGCTT
ATCCCGACTCTATACCCACCGCGATTTGGAGGCAGAGATACTTTTGCATC
TGGGAAAGATCTTTGCCAAGGACACACAGATGACAAGTATCGCTAAGAAA
TGCTATGAGCATGCCAAGCGCATCTACGTCGACTTTAACGATCTGCACAG
CCGCAAGATGGCCAACTATCTGCAGGCCAAGTTAATGGCGGATGAAATCA
CACCACTTTATATGGCCATGCTTAAGTCGTCTACCACTCGCTATTGCGCC
TTTTTCAACCTGCGTCAGTGGAAGAACCGCTGTCGTCCTTTTTGGAAGCG
ACTGGGTGACGAGATCATCAAACAGGAAACGGATAGCATATACTGTCTGC
TGGATGAGGAGAAGGAGGATCCTGGTCACGATGTGGCTCCCTATGACGAT
ATCGATCTCAAGACATTCAAACTGGCTGAGGGAGATATCTAAAAGCTTTC
TAGACCAT

BS16594.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1476 CG31798-PB 1..1476 17..1492 7380 100 Plus
CG31798-RA 1476 CG31798-PA 1..1476 17..1492 7380 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:58:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-RB 1643 CG31798-RB 69..1545 16..1492 7385 100 Plus
CG31798-RA 1913 CG31798-RA 69..1545 16..1492 7385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:58:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19394228..19395015 16..803 3940 100 Plus
2L 23513712 2L 19395323..19395822 993..1492 2470 99.6 Plus
2L 23513712 2L 19395076..19395271 804..999 980 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:58:12 has no hits.

BS16594.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:30:39 Download gff for BS16594.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 1..1476 17..1492 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:02:47 Download gff for BS16594.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..1548 10..1498 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:46 Download gff for BS16594.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 70..1543 17..1490 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:30:39 Download gff for BS16594.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 65..1548 10..1498 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:24 Download gff for BS16594.complete
Subject Subject Range Query Range Percent Splice Strand
CG31798-RA 70..1543 17..1490 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:24 Download gff for BS16594.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19394229..19395015 17..803 100 -> Plus
2L 19395076..19395271 804..999 100 -> Plus
2L 19395330..19395820 1000..1490 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:46 Download gff for BS16594.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19395076..19395271 804..999 100 -> Plus
arm_2L 19394229..19395015 17..803 100 -> Plus
arm_2L 19395330..19395820 1000..1490 100   Plus

BS16594.pep Sequence

Translation from 16 to 1491

> BS16594.pep
MSLQWQNEVVRITRQVKRNLPHRNFREINFDRETIRQGITPLTYDEARRL
KGPVFEALEDELRRAGCTMLPEFLHCLATKENALFESLNIRERLSDDSEL
LYGMVDRLRDAELAVCLNKHRGLKKCFGLFFETMQLLEPYRQKYAYALVA
LNEHIISLCRNIAGQEHDAAEYISRIYYIYSMYLVNTGQRTSAINFLQIA
MDLVRGHVWTAEVGMPAGSLTLHELVAQNLARQLLIQGKSIVRQHPEDAV
AMARRATVLIAEIGRDKNMEIFCDTFLERAYFLMEIGNFNSAQQCLEQIK
TQILACTEYRFVKLNIKYYLIQGQCSEIFEHVEKATSCYKRALRLSRLYT
HRDLEAEILLHLGKIFAKDTQMTSIAKKCYEHAKRIYVDFNDLHSRKMAN
YLQAKLMADEITPLYMAMLKSSTTRYCAFFNLRQWKNRCRPFWKRLGDEI
IKQETDSIYCLLDEEKEDPGHDVAPYDDIDLKTFKLAEGDI*

BS16594.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31798-PB 491 CG31798-PB 1..491 1..491 2561 100 Plus
CG31798-PA 491 CG31798-PA 1..491 1..491 2561 100 Plus