Clone Sequence Records
BS16649.5prime Sequence
336 bp (336 high quality bases) assembled on 2007-05-15
> BS16649.5prime
GAAGTTATCAGTCGACATGTGGCTGCTGCGCGAAGCGTTCTTTTTTGGGC
TACTGGCCATGGCTTGGGCCTTCGGCGACGAGGCTATCTTTGAGGACGAG
GACATCTACAACCAGGCACTGCCACCAGTTCCCCATACGGGCATCACGGT
GCCCGGAACCAAGTGGTGCGGACCGGGCAACACGGCGGCGAACTTCGAGG
ATTTGGGCCGCGAACGGGAGACGGACAAGTGCTGTCGTGCCCACGACCAT
TGCGACGAGATTATCGAGTCCCACGGAGCACTCCACGGACTGCCCACCAA
CACAGACTGGTTTCCCATGTAAAAGCTTTCTAGACC
BS16649.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:59:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11124-PB | 306 | sPLA2-RB | 1..306 | 17..322 | 1530 | 100 | Plus |
CG11124-PA | 561 | sPLA2-RA | 1..302 | 17..318 | 1510 | 100 | Plus |
CG11124-PC | 561 | sPLA2-RC | 1..302 | 17..318 | 1510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 725 | CG11124-RB | 29..337 | 14..322 | 1545 | 100 | Plus |
sPLA2-RC | 897 | CG11124-RC | 208..512 | 14..318 | 1525 | 100 | Plus |
sPLA2-RA | 718 | CG11124-RA | 29..333 | 14..318 | 1525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:11:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7443071..7443379 | 14..322 | 1545 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:12:00 has no hits.
BS16649.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:59:41 Download gff for
BS16649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11124-PB | 1..306 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:17:30 Download gff for
BS16649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..339 | 14..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:25:31 Download gff for
BS16649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..339 | 14..326 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:25:31 Download gff for
BS16649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7443071..7443381 | 14..326 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:17:30 Download gff for
BS16649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3330576..3330886 | 14..326 | 99 | | Plus |
BS16649.3prime Sequence
336 bp (336 high quality bases) assembled on 2007-05-15
> BS16649.3prime
ATGGTCTAGAAAGCTTTTACATGGGAAACCAGTCTGTGTTGGTGGGCAGT
CCGTGGAGTGCTCCGTGGGACTCGATAATCTCGTCGCAATGGTCGTGGGC
ACGACAGCACTTGTCCGTCTCCCGTTCGCGGCCCAAATCCTCGAAGTTCG
CCGCCGTGTTGCCCGGTCCGCACCACTTGGTTCCGGGCACCGTGATGCCC
GTATGGGGAACTGGTGGCAGTGCCTGGTTGTAGATGTCCTCGTCCTCAAA
GATAGCCTCGTCGCCGAAGGCCCAAGCCATGGCCAGTAGCCCAAAAAAGA
ACGCTTCGCGCAGCAGCCACATGTCGACTGATAACT
BS16649.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:03:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11124-PB | 306 | sPLA2-RB | 1..306 | 322..17 | 1530 | 100 | Minus |
CG11124-PA | 561 | sPLA2-RA | 1..302 | 322..21 | 1510 | 100 | Minus |
CG11124-PC | 561 | sPLA2-RC | 1..302 | 322..21 | 1510 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:46:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 725 | CG11124-RB | 29..337 | 325..17 | 1545 | 100 | Minus |
sPLA2-RC | 897 | CG11124-RC | 208..512 | 325..21 | 1525 | 100 | Minus |
sPLA2-RA | 718 | CG11124-RA | 29..333 | 325..21 | 1525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:46:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7443071..7443379 | 325..17 | 1545 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:46:52 has no hits.
BS16649.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:03:55 Download gff for
BS16649.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11124-PB | 1..306 | 17..322 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:48:54 Download gff for
BS16649.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..339 | 13..325 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:23:24 Download gff for
BS16649.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 29..339 | 13..325 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:23:24 Download gff for
BS16649.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7443071..7443381 | 13..325 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:48:54 Download gff for
BS16649.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3330576..3330886 | 13..325 | 99 | | Minus |
BS16649.complete Sequence
338 bp assembled on 2007-05-07
GenBank Submission: FJ638170
> BS16649.complete
GAAGTTATCAGTCGACATGTGGCTGCTGCGCGAAGCGTTCTTTTTTGGGC
TACTGGCCATGGCTTGGGCCTTCGGCGACGAGGCTATCTTTGAGGACGAG
GACATCTACAACCAGGCACTGCCACCAGTTCCCCATACGGGCATCACGGT
GCCCGGAACCAAGTGGTGCGGACCGGGCAACACGGCGGCGAACTTCGAGG
ATTTGGGCCGCGAACGGGAGACGGACAAGTGCTGTCGTGCCCACGACCAT
TGCGACGAGATTATCGAGTCCCACGGAGCACTCCACGGACTGCCCACCAA
CACAGACTGGTTTCCCATGTAAAAGCTTTCTAGACCAT
BS16649.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:58:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 306 | CG11124-PB | 1..306 | 17..322 | 1530 | 100 | Plus |
sPLA2-RC | 561 | CG11124-PC | 1..302 | 17..318 | 1510 | 100 | Plus |
sPLA2-RA | 561 | CG11124-PA | 1..302 | 17..318 | 1510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:58:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-RB | 725 | CG11124-RB | 29..337 | 14..322 | 1545 | 100 | Plus |
sPLA2-RC | 897 | CG11124-RC | 208..512 | 14..318 | 1525 | 100 | Plus |
sPLA2-RA | 718 | CG11124-RA | 29..333 | 14..318 | 1525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:58:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7443071..7443379 | 14..322 | 1545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:58:35 has no hits.
BS16649.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:30:42 Download gff for
BS16649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 1..306 | 17..322 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:02:52 Download gff for
BS16649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 27..337 | 14..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:43:34 Download gff for
BS16649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 32..335 | 17..320 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:30:43 Download gff for
BS16649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 27..337 | 14..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:40 Download gff for
BS16649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sPLA2-RB | 32..335 | 17..320 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:40 Download gff for
BS16649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7443074..7443377 | 17..320 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:34 Download gff for
BS16649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3330579..3330882 | 17..320 | 100 | | Plus |
BS16649.pep Sequence
Translation from 16 to 321
> BS16649.pep
MWLLREAFFFGLLAMAWAFGDEAIFEDEDIYNQALPPVPHTGITVPGTKW
CGPGNTAANFEDLGRERETDKCCRAHDHCDEIIESHGALHGLPTNTDWFP
M*
BS16649.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:25:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sPLA2-PB | 101 | CG11124-PB | 1..101 | 1..101 | 578 | 100 | Plus |
sPLA2-PC | 186 | CG11124-PC | 1..101 | 1..101 | 574 | 99 | Plus |
sPLA2-PA | 186 | CG11124-PA | 1..101 | 1..101 | 574 | 99 | Plus |
CG30503-PB | 173 | CG30503-PB | 26..83 | 43..101 | 199 | 62.7 | Plus |
CG30503-PA | 173 | CG30503-PA | 26..83 | 43..101 | 199 | 62.7 | Plus |