Clone Sequence Records
BS16666.3prime Sequence
898 bp (806 high quality bases) assembled on 2007-05-15
> BS16666.3prime
ATGGTCTAGAAAGCTTTTAAGTGAAAACGAATGCCACTTTATTTAGCAGC
TCCAGCAAATGTGTCCAGGAATTGGGGGGTAGTTGGGCACGCAGCTGCTG
GGCGAACTGCCGGCGACATATGGATCCGGTGGCCAGCATCAGGTAGGTTA
TGTATGTGGCCTCGTTCACGGGCAGCTGCGAGACAGCCGTGACTGGTGCA
TCAGCGGTCAATTGCATCTCATCCAAGTCTAGGTAGGGCAGGTGGCGATT
CCAATGGTCGATTAGGTAGGCAATAAGGCTGCCGGCCAGACGTACATGCT
CCATACTGGCCCAGAATCTCATCTCATTGGCGGATTGCGATACGAACAGA
AAGATATTGTGCAGGAAGCCGGTGCAAGCGGTAGATCCGCCCTCCGATAA
AGTGTCACAGATCATGTGGCGCATTAGGTAGCAATCCTTGTGAATTTCGC
TGTCCTTTGGCTCCCTAAAAAGCTGCAGCCACACCTGGTACTCAATCAGC
TCCATGGAGCGCTTTATTGCGGTCTGCATGTCCTCAAGGCTGGATAAGCG
GCCAATCCGCTTGACTAGCCGTCGCATCTGCTGAAGATCGGGATTGATAA
AATCGCTGGAAGAAAGCGCATCCGATTGGCGTATTGCCGACCAGTCCAAA
TCACCGATCTCACTCCACGCAGGCTGAATCTCGGCCAACGTTCGATGCGA
AAGATGAAGCAGTGGTGCATGAGTTTCTCCCTTTCGTGTGTTCACGATGG
TGGTACACAGCTCACGAATACACTTCCGTCGATCCACCAATGCAGAGCAG
CTAGCGAAGAAGCCACGGCAATCGCAGCGTTCGGCCAGCGATTGCCCGAA
GCGATCATAGCACTCGAACAGGTACAGGTGAGCCTTTAGCAGGAATTC
BS16666.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-PA | 1038 | CG8191-RA | 162..1038 | 893..17 | 4385 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:31:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1486 | CG8191-RA | 170..1051 | 898..17 | 4395 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:31:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15732347..15733228 | 898..17 | 4395 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:31:53 has no hits.
BS16666.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:07:07 Download gff for
BS16666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-PA | 157..1038 | 17..898 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:18:49 Download gff for
BS16666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 170..1053 | 12..898 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:37:54 Download gff for
BS16666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 170..1053 | 12..898 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:37:54 Download gff for
BS16666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15732347..15733230 | 12..898 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:18:49 Download gff for
BS16666.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15626380..15627263 | 12..898 | 99 | | Minus |
BS16666.5prime Sequence
846 bp (795 high quality bases) assembled on 2007-05-15
> BS16666.5prime
GAAGTTATCAGTCGACATGGATTTGTTTATCCGAAAAGAACTGAGCCTAT
CCACGAGCAGCGTGCTTGAAGATGTGGCGCCGCACTGTCTCAAGCTACTC
ACATGGCTGCACGATTGTCAGGAGGAGATGCACTCCGAGCACCGCCATCT
GCGACTGAGCCAATCCGTTGTGGAATCCCTGCTAAAGGCTCACCTGTACC
TGTTCGAGTGCTATGATCGCTTCGGGCAATCGCTGGCCGAACGCTGCGAT
TGCCGTGGCTTCTTCGCTAGCTGCTCTGCATTGGTGGATCGACGGAAGTG
TATTCGTGAGCTGTGTACCACCATCGTGAACACACGAAAGGGAGAAACTC
ATGCACCACTGCTTCATCTTTCGCATCGAACGTTGGCCGAGATTCAGCCT
GCGTGGAGTGAGATCGGTGATTTGGACTGGTCGGCAATACGCCAATCGGA
TGCGCTTTCTTCCAGCGATTTTATCAATCCCGATCTTCAGCAGATGCGAC
GGCTAGTCAAGCGGATTGGCCGCTTATCCAGCCTTGAGGACATGCAGACC
GCAATAAAGCGCTCCATGGAGCTGATTGAGTACCAGGTGTGGCTGCAGCT
TTTTAGGGAGCCAAAGGACAGCGAAATTCACAAGGATTGCTACCTAATGC
GCCACATGATCTGTGACACTTTATCGGAGGGCGGATCTACCGCTTGCACC
GGCTTCCTGCACAATATCTTTCTGTTCGTATCGCAATCCGCCAATGAGAT
GAGATTCTGGGCCAGTATGGAGCATGTACGTCTGGCCGGCAGCCTTATTG
CCTACCTAATCGACCATTGGAATCGCCACCTGCCCTACCTAGACTT
BS16666.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:02:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-PA | 1038 | CG8191-RA | 1..830 | 17..846 | 4150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:20:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1486 | CG8191-RA | 14..843 | 17..846 | 4150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15732191..15733020 | 17..846 | 4150 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:20:34 has no hits.
BS16666.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:02:03 Download gff for
BS16666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-PA | 1..830 | 17..846 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:41:16 Download gff for
BS16666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 6..843 | 9..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:46:14 Download gff for
BS16666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 6..843 | 9..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:46:14 Download gff for
BS16666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15732183..15733020 | 9..846 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:41:16 Download gff for
BS16666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15626216..15627053 | 9..846 | 99 | | Plus |
BS16666.complete Sequence
1070 bp assembled on 2007-05-07
GenBank Submission: FJ638175
> BS16666.complete
GAAGTTATCAGTCGACATGGATTTGTTTATCCGAAAAGAACTGAGCCTAT
CCACGAGCAGCGTGCTTGAAGATGTGGCGCCGCACTGTCTCAAGCTACTC
ACATGGCTGCACGATTGTCAGGAGGAGATGCACTCCGAGCACCGCCATCT
GCGACTGAGCCAATCCGTTGTGGAATCCCTGCTAAAGGCTCACCTGTACC
TGTTCGAGTGCTATGATCGCTTCGGGCAATCGCTGGCCGAACGCTGCGAT
TGCCGTGGCTTCTTCGCTAGCTGCTCTGCATTGGTGGATCGACGGAAGTG
TATTCGTGAGCTGTGTACCACCATCGTGAACACACGAAAGGGAGAAACTC
ATGCACCACTGCTTCATCTTTCGCATCGAACGTTGGCCGAGATTCAGCCT
GCGTGGAGTGAGATCGGTGATTTGGACTGGTCGGCAATACGCCAATCGGA
TGCGCTTTCTTCCAGCGATTTTATCAATCCCGATCTTCAGCAGATGCGAC
GGCTAGTCAAGCGGATTGGCCGCTTATCCAGCCTTGAGGACATGCAGACC
GCAATAAAGCGCTCCATGGAGCTGATTGAGTACCAGGTGTGGCTGCAGCT
TTTTAGGGAGCCAAAGGACAGCGAAATTCACAAGGATTGCTACCTAATGC
GCCACATGATCTGTGACACTTTATCGGAGGGCGGATCTACCGCTTGCACC
GGCTTCCTGCACAATATCTTTCTGTTCGTATCGCAATCCGCCAATGAGAT
GAGATTCTGGGCCAGTATGGAGCATGTACGTCTGGCCGGCAGCCTTATTG
CCTACCTAATCGACCATTGGAATCGCCACCTGCCCTACCTAGACTTGGAT
GAGATGCAATTGACCGCTGATGCACCAGTCACGGCTGTCTCGCAGCTGCC
CGTGAACGAGGCCACATACATAACCTACCTGATGCTGGCCACCGGATCCA
TATGTCGCCGGCAGTTCGCCCAGCAGCTGCGTGCCCAACTACCCCCCAAT
TCCTGGACACATTTGCTGGAGCTGCTAAATAAAGTGGCATTCGTTTTCAC
TTAAAAGCTTTCTAGACCAT
BS16666.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:50:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1038 | CG8191-PA | 1..1038 | 17..1054 | 5190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:50:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1486 | CG8191-RA | 14..1051 | 17..1054 | 5190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:50:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15732191..15733228 | 17..1054 | 5190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:50:03 has no hits.
BS16666.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:30:20 Download gff for
BS16666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 1..1038 | 17..1054 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:02:28 Download gff for
BS16666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 2..1049 | 9..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:54 Download gff for
BS16666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 14..1049 | 17..1052 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:30:20 Download gff for
BS16666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 2..1049 | 9..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:19:39 Download gff for
BS16666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 14..1049 | 17..1052 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:19:39 Download gff for
BS16666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15732191..15733226 | 17..1052 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:54 Download gff for
BS16666.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15626224..15627259 | 17..1052 | 100 | | Plus |
BS16666.pep Sequence
Translation from 16 to 1053
> BS16666.pep
MDLFIRKELSLSTSSVLEDVAPHCLKLLTWLHDCQEEMHSEHRHLRLSQS
VVESLLKAHLYLFECYDRFGQSLAERCDCRGFFASCSALVDRRKCIRELC
TTIVNTRKGETHAPLLHLSHRTLAEIQPAWSEIGDLDWSAIRQSDALSSS
DFINPDLQQMRRLVKRIGRLSSLEDMQTAIKRSMELIEYQVWLQLFREPK
DSEIHKDCYLMRHMICDTLSEGGSTACTGFLHNIFLFVSQSANEMRFWAS
MEHVRLAGSLIAYLIDHWNRHLPYLDLDEMQLTADAPVTAVSQLPVNEAT
YITYLMLATGSICRRQFAQQLRAQLPPNSWTHLLELLNKVAFVFT*
BS16666.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-PA | 345 | CG8191-PA | 1..345 | 1..345 | 1813 | 100 | Plus |
