Clone BS16682 Report

Search the DGRC for BS16682

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:166
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptHis3.3A-RA
Protein status:BS16682.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16682.3prime Sequence

441 bp (441 high quality bases) assembled on 2007-05-15

> BS16682.3prime
ATGGTCTAGAAAGCTTTTAGGCCCGCTCGCCACGGATGCGTCTGGCCAGC
TGGATGTCCTTGGGCATAATGGTGACGCGCTTGGCGTGAATGGCGCACAG
ATTGGTGTCCTCGAACAGACCGACCAGGTACGCCTCGCTGGCCTCCTGTA
GGGCTCCAATGGCCGCCGACTGGAAGCGCAGATCGGTCTTGAAGTCCTGG
GCTATCTCGCGCACCAGACGCTGGAACGGCAGCTTGCGGATGAGCAGCTC
CGTGGACTTCTGGTAGCGACGAATCTCACGCAGGGCCACCGTTCCAGGAC
GGTAGCGATGTGGCTTCTTCACTCCGCCGGTGGATGGCGCCGATTTACGG
GCCGCCTTGGTGGCCAGCTGCTTGCGGGGCGCCTTGCCTCCGGTCGATTT
ACGGGCTGTTTGCTTGGTACGTGCCATGTCGACTGATAACT

BS16682.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:07:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG5825-PA 411 His3.3A-RA 1..411 427..17 2055 100 Minus
CG5825-PB 372 His3.3A-RB 1..329 427..99 1645 100 Minus
CG8989-PA 411 His3.3B-RA 1..215 427..213 475 88.8 Minus
CG8989-PC 411 His3.3B-RC 1..215 427..213 475 88.8 Minus
CG8989-PB 411 His3.3B-RB 1..215 427..213 475 88.8 Minus
CG8989-PA 411 His3.3B-RA 292..378 136..50 185 88.5 Minus
CG8989-PC 411 His3.3B-RC 292..378 136..50 185 88.5 Minus
CG8989-PB 411 His3.3B-RB 292..378 136..50 185 88.5 Minus
CG5825-PB 372 His3.3A-RB 330..363 49..16 170 100 Minus
CG31613-PA 411 His3:CG31613-RA 95..167 333..261 140 87.6 Minus
CG33803-PA 411 His3:CG33803-RA 95..167 333..261 140 87.6 Minus
CG33806-PA 411 His3:CG33806-RA 95..167 333..261 140 87.6 Minus
CG33809-PA 411 His3:CG33809-RA 95..167 333..261 140 87.6 Minus
CG33830-PA 411 His3:CG33830-RA 95..167 333..261 140 87.6 Minus
CG33848-PA 411 His3:CG33848-RA 95..167 333..261 140 87.6 Minus
CG33863-PA 411 His3:CG33863-RA 95..167 333..261 140 87.6 Minus
CG33821-PA 411 His3:CG33821-RA 95..167 333..261 140 87.6 Minus
CG33824-PA 411 His3:CG33824-RA 95..167 333..261 140 87.6 Minus
CG33812-PA 411 His3:CG33812-RA 95..167 333..261 140 87.6 Minus
CG33815-PA 411 His3:CG33815-RA 95..167 333..261 140 87.6 Minus
CG33818-PA 411 His3:CG33818-RA 95..167 333..261 140 87.6 Minus
CG33827-PA 411 His3:CG33827-RA 95..167 333..261 140 87.6 Minus
CG33833-PA 411 His3:CG33833-RA 95..167 333..261 140 87.6 Minus
CG33836-PA 411 His3:CG33836-RA 95..167 333..261 140 87.6 Minus
CG33839-PA 411 His3:CG33839-RA 95..167 333..261 140 87.6 Minus
CG33842-PA 411 His3:CG33842-RA 95..167 333..261 140 87.6 Minus
CG33845-PA 411 His3:CG33845-RA 95..167 333..261 140 87.6 Minus
CG33851-PA 411 His3:CG33851-RA 95..167 333..261 140 87.6 Minus
CG33854-PA 411 His3:CG33854-RA 95..167 333..261 140 87.6 Minus
CG33857-PA 411 His3:CG33857-RA 95..167 333..261 140 87.6 Minus
CG33860-PA 411 His3:CG33860-RA 95..167 333..261 140 87.6 Minus
CG33866-PA 411 His3:CG33866-RA 95..167 333..261 140 87.6 Minus
CG31613-PA 411 His3:CG31613-RA 187..218 241..210 135 96.8 Minus
CG33803-PA 411 His3:CG33803-RA 187..218 241..210 135 96.8 Minus
CG33806-PA 411 His3:CG33806-RA 187..218 241..210 135 96.8 Minus
CG33809-PA 411 His3:CG33809-RA 187..218 241..210 135 96.8 Minus
CG33830-PA 411 His3:CG33830-RA 187..218 241..210 135 96.8 Minus
CG33848-PA 411 His3:CG33848-RA 187..218 241..210 135 96.8 Minus
CG33863-PA 411 His3:CG33863-RA 187..218 241..210 135 96.8 Minus
CG33821-PA 411 His3:CG33821-RA 187..218 241..210 135 96.8 Minus
CG33824-PA 411 His3:CG33824-RA 187..218 241..210 135 96.8 Minus
CG33812-PA 411 His3:CG33812-RA 187..218 241..210 135 96.8 Minus
CG33815-PA 411 His3:CG33815-RA 187..218 241..210 135 96.8 Minus
CG33818-PA 411 His3:CG33818-RA 187..218 241..210 135 96.8 Minus
CG33827-PA 411 His3:CG33827-RA 187..218 241..210 135 96.8 Minus
CG33833-PA 411 His3:CG33833-RA 187..218 241..210 135 96.8 Minus
CG33836-PA 411 His3:CG33836-RA 187..218 241..210 135 96.8 Minus
CG33839-PA 411 His3:CG33839-RA 187..218 241..210 135 96.8 Minus
CG33842-PA 411 His3:CG33842-RA 187..218 241..210 135 96.8 Minus
CG33845-PA 411 His3:CG33845-RA 187..218 241..210 135 96.8 Minus
CG33851-PA 411 His3:CG33851-RA 187..218 241..210 135 96.8 Minus
CG33854-PA 411 His3:CG33854-RA 187..218 241..210 135 96.8 Minus
CG33857-PA 411 His3:CG33857-RA 187..218 241..210 135 96.8 Minus
CG33860-PA 411 His3:CG33860-RA 187..218 241..210 135 96.8 Minus
CG33866-PA 411 His3:CG33866-RA 187..218 241..210 135 96.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
His3.3A-RD 772 CG5825-RD 126..537 427..16 2060 100 Minus
His3.3A-RC 926 CG5825-RC 126..537 427..16 2060 100 Minus
His3.3A-RA 848 CG5825-RA 202..613 427..16 2060 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5055259..5055541 427..145 1415 100 Minus
X 23542271 X 9154379..9154663 145..429 885 87.4 Plus
2L 23513712 2L 21420186..21420596 427..17 855 80.5 Minus
2L 23513712 2L 21425250..21425660 427..17 855 80.5 Minus
2L 23513712 2L 21430312..21430722 427..17 855 80.5 Minus
2L 23513712 2L 21435356..21435766 427..17 855 80.5 Minus
2L 23513712 2L 21440244..21440654 427..17 855 80.5 Minus
2L 23513712 2L 21454445..21454855 427..17 855 80.5 Minus
2L 23513712 2L 21484738..21485148 427..17 855 80.5 Minus
2L 23513712 2L 21489887..21490297 427..17 855 80.5 Minus
2L 23513712 2L 21494932..21495342 427..17 855 80.5 Minus
2L 23513712 2L 21499977..21500387 427..17 855 80.5 Minus
2L 23513712 2L 21505030..21505440 427..17 855 80.5 Minus
2L 23513712 2L 21510075..21510485 427..17 855 80.5 Minus
2L 23513712 2L 21515119..21515529 427..17 855 80.5 Minus
2L 23513712 2L 21520166..21520576 427..17 855 80.5 Minus
2L 23513712 2L 21525009..21525419 427..17 855 80.5 Minus
2L 23513712 2L 21529852..21530262 427..17 855 80.5 Minus
2L 23513712 2L 21534693..21535103 427..17 855 80.5 Minus
2L 23513712 2L 21541210..21541620 427..17 855 80.5 Minus
2L 23513712 2L 21459504..21459914 427..17 840 80.3 Minus
2L 23513712 2L 21464564..21464974 427..17 840 80.3 Minus
2L 23513712 2L 21469607..21470017 427..17 840 80.3 Minus
2L 23513712 2L 21474650..21475060 427..17 840 80.3 Minus
2L 23513712 2L 21479693..21480103 427..17 840 80.3 Minus
2L 23513712 2L 5055628..5055760 148..16 665 100 Minus
2L 23513712 2L 21405669..21405970 318..17 655 81.1 Minus
X 23542271 X 9154112..9154231 17..136 360 86.7 Plus
Blast to na_te.dros performed on 2015-02-10 15:05:08 has no hits.

BS16682.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:07:16 Download gff for BS16682.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5825-PA 1..411 17..427 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:19:58 Download gff for BS16682.3prime
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..616 13..427 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:13:50 Download gff for BS16682.3prime
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..616 13..427 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:13:50 Download gff for BS16682.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 5055259..5055540 146..427 100 -> Minus
2L 5055631..5055763 13..145 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:19:58 Download gff for BS16682.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5055259..5055540 146..427 100 -> Minus
arm_2L 5055631..5055763 13..145 99   Minus

BS16682.5prime Sequence

441 bp (441 high quality bases) assembled on 2007-05-15

> BS16682.5prime
GAAGTTATCAGTCGACATGGCACGTACCAAGCAAACAGCCCGTAAATCGA
CCGGAGGCAAGGCGCCCCGCAAGCAGCTGGCCACCAAGGCGGCCCGTAAA
TCGGCGCCATCCACCGGCGGAGTGAAGAAGCCACATCGCTACCGTCCTGG
AACGGTGGCCCTGCGTGAGATTCGTCGCTACCAGAAGTCCACGGAGCTGC
TCATCCGCAAGCTGCCGTTCCAGCGTCTGGTGCGCGAGATAGCCCAGGAC
TTCAAGACCGATCTGCGCTTCCAGTCGGCGGCCATTGGAGCCCTACAGGA
GGCCAGCGAGGCGTACCTGGTCGGTCTGTTCGAGGACACCAATCTGTGCG
CCATTCACGCCAAGCGCGTCACCATTATGCCCAAGGACATCCAGCTGGCC
AGACGCATCCGTGGCGAGCGGGCCTAAAAGCTTTCTAGACC

BS16682.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG5825-PA 411 His3.3A-RA 1..411 17..427 2055 100 Plus
CG5825-PB 372 His3.3A-RB 1..329 17..345 1645 100 Plus
CG8989-PA 411 His3.3B-RA 1..215 17..231 475 88.8 Plus
CG8989-PC 411 His3.3B-RC 1..215 17..231 475 88.8 Plus
CG8989-PB 411 His3.3B-RB 1..215 17..231 475 88.8 Plus
CG8989-PA 411 His3.3B-RA 292..378 308..394 185 88.5 Plus
CG8989-PC 411 His3.3B-RC 292..378 308..394 185 88.5 Plus
CG8989-PB 411 His3.3B-RB 292..378 308..394 185 88.5 Plus
CG5825-PB 372 His3.3A-RB 330..363 395..428 170 100 Plus
CG31613-PA 411 His3:CG31613-RA 95..167 111..183 140 87.6 Plus
CG33803-PA 411 His3:CG33803-RA 95..167 111..183 140 87.6 Plus
CG33806-PA 411 His3:CG33806-RA 95..167 111..183 140 87.6 Plus
CG33809-PA 411 His3:CG33809-RA 95..167 111..183 140 87.6 Plus
CG33830-PA 411 His3:CG33830-RA 95..167 111..183 140 87.6 Plus
CG33848-PA 411 His3:CG33848-RA 95..167 111..183 140 87.6 Plus
CG33863-PA 411 His3:CG33863-RA 95..167 111..183 140 87.6 Plus
CG33821-PA 411 His3:CG33821-RA 95..167 111..183 140 87.6 Plus
CG33824-PA 411 His3:CG33824-RA 95..167 111..183 140 87.6 Plus
CG33812-PA 411 His3:CG33812-RA 95..167 111..183 140 87.6 Plus
CG33815-PA 411 His3:CG33815-RA 95..167 111..183 140 87.6 Plus
CG33818-PA 411 His3:CG33818-RA 95..167 111..183 140 87.6 Plus
CG33827-PA 411 His3:CG33827-RA 95..167 111..183 140 87.6 Plus
CG33833-PA 411 His3:CG33833-RA 95..167 111..183 140 87.6 Plus
CG33836-PA 411 His3:CG33836-RA 95..167 111..183 140 87.6 Plus
CG33839-PA 411 His3:CG33839-RA 95..167 111..183 140 87.6 Plus
CG33842-PA 411 His3:CG33842-RA 95..167 111..183 140 87.6 Plus
CG33845-PA 411 His3:CG33845-RA 95..167 111..183 140 87.6 Plus
CG33851-PA 411 His3:CG33851-RA 95..167 111..183 140 87.6 Plus
CG33854-PA 411 His3:CG33854-RA 95..167 111..183 140 87.6 Plus
CG33857-PA 411 His3:CG33857-RA 95..167 111..183 140 87.6 Plus
CG33860-PA 411 His3:CG33860-RA 95..167 111..183 140 87.6 Plus
CG33866-PA 411 His3:CG33866-RA 95..167 111..183 140 87.6 Plus
CG31613-PA 411 His3:CG31613-RA 187..218 203..234 135 96.8 Plus
CG33803-PA 411 His3:CG33803-RA 187..218 203..234 135 96.8 Plus
CG33806-PA 411 His3:CG33806-RA 187..218 203..234 135 96.8 Plus
CG33809-PA 411 His3:CG33809-RA 187..218 203..234 135 96.8 Plus
CG33830-PA 411 His3:CG33830-RA 187..218 203..234 135 96.8 Plus
CG33848-PA 411 His3:CG33848-RA 187..218 203..234 135 96.8 Plus
CG33863-PA 411 His3:CG33863-RA 187..218 203..234 135 96.8 Plus
CG33821-PA 411 His3:CG33821-RA 187..218 203..234 135 96.8 Plus
CG33824-PA 411 His3:CG33824-RA 187..218 203..234 135 96.8 Plus
CG33812-PA 411 His3:CG33812-RA 187..218 203..234 135 96.8 Plus
CG33815-PA 411 His3:CG33815-RA 187..218 203..234 135 96.8 Plus
CG33818-PA 411 His3:CG33818-RA 187..218 203..234 135 96.8 Plus
CG33827-PA 411 His3:CG33827-RA 187..218 203..234 135 96.8 Plus
CG33833-PA 411 His3:CG33833-RA 187..218 203..234 135 96.8 Plus
CG33836-PA 411 His3:CG33836-RA 187..218 203..234 135 96.8 Plus
CG33839-PA 411 His3:CG33839-RA 187..218 203..234 135 96.8 Plus
CG33842-PA 411 His3:CG33842-RA 187..218 203..234 135 96.8 Plus
CG33845-PA 411 His3:CG33845-RA 187..218 203..234 135 96.8 Plus
CG33851-PA 411 His3:CG33851-RA 187..218 203..234 135 96.8 Plus
CG33854-PA 411 His3:CG33854-RA 187..218 203..234 135 96.8 Plus
CG33857-PA 411 His3:CG33857-RA 187..218 203..234 135 96.8 Plus
CG33860-PA 411 His3:CG33860-RA 187..218 203..234 135 96.8 Plus
CG33866-PA 411 His3:CG33866-RA 187..218 203..234 135 96.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
His3.3A-RD 772 CG5825-RD 126..537 17..428 2060 100 Plus
His3.3A-RC 926 CG5825-RC 126..537 17..428 2060 100 Plus
His3.3A-RA 848 CG5825-RA 202..613 17..428 2060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:21:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5055259..5055541 17..299 1415 100 Plus
X 23542271 X 9154379..9154663 299..15 885 87.4 Minus
2L 23513712 2L 21420186..21420596 17..427 855 80.5 Plus
2L 23513712 2L 21425250..21425660 17..427 855 80.5 Plus
2L 23513712 2L 21430312..21430722 17..427 855 80.5 Plus
2L 23513712 2L 21435356..21435766 17..427 855 80.5 Plus
2L 23513712 2L 21440244..21440654 17..427 855 80.5 Plus
2L 23513712 2L 21454445..21454855 17..427 855 80.5 Plus
2L 23513712 2L 21484738..21485148 17..427 855 80.5 Plus
2L 23513712 2L 21489887..21490297 17..427 855 80.5 Plus
2L 23513712 2L 21494932..21495342 17..427 855 80.5 Plus
2L 23513712 2L 21499977..21500387 17..427 855 80.5 Plus
2L 23513712 2L 21505030..21505440 17..427 855 80.5 Plus
2L 23513712 2L 21510075..21510485 17..427 855 80.5 Plus
2L 23513712 2L 21515119..21515529 17..427 855 80.5 Plus
2L 23513712 2L 21520166..21520576 17..427 855 80.5 Plus
2L 23513712 2L 21525009..21525419 17..427 855 80.5 Plus
2L 23513712 2L 21529852..21530262 17..427 855 80.5 Plus
2L 23513712 2L 21534693..21535103 17..427 855 80.5 Plus
2L 23513712 2L 21541210..21541620 17..427 855 80.5 Plus
2L 23513712 2L 21459504..21459914 17..427 840 80.3 Plus
2L 23513712 2L 21464564..21464974 17..427 840 80.3 Plus
2L 23513712 2L 21469607..21470017 17..427 840 80.3 Plus
2L 23513712 2L 21474650..21475060 17..427 840 80.3 Plus
2L 23513712 2L 21479693..21480103 17..427 840 80.3 Plus
2L 23513712 2L 5055628..5055760 296..428 665 100 Plus
2L 23513712 2L 21405669..21405970 126..427 655 81.1 Plus
X 23542271 X 9154112..9154231 427..308 360 86.7 Minus
Blast to na_te.dros performed on 2015-02-13 13:21:57 has no hits.

BS16682.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:02:17 Download gff for BS16682.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5825-PA 1..411 17..427 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:41:26 Download gff for BS16682.5prime
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..616 17..431 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:49:18 Download gff for BS16682.5prime
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..616 17..431 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:49:18 Download gff for BS16682.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5055259..5055540 17..298 100 -> Plus
2L 5055631..5055763 299..431 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:41:26 Download gff for BS16682.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5055259..5055540 17..298 100 -> Plus
arm_2L 5055631..5055763 299..431 99   Plus

BS16682.complete Sequence

443 bp assembled on 2007-05-07

GenBank Submission: FJ638181

> BS16682.complete
GAAGTTATCAGTCGACATGGCACGTACCAAGCAAACAGCCCGTAAATCGA
CCGGAGGCAAGGCGCCCCGCAAGCAGCTGGCCACCAAGGCGGCCCGTAAA
TCGGCGCCATCCACCGGCGGAGTGAAGAAGCCACATCGCTACCGTCCTGG
AACGGTGGCCCTGCGTGAGATTCGTCGCTACCAGAAGTCCACGGAGCTGC
TCATCCGCAAGCTGCCGTTCCAGCGTCTGGTGCGCGAGATAGCCCAGGAC
TTCAAGACCGATCTGCGCTTCCAGTCGGCGGCCATTGGAGCCCTACAGGA
GGCCAGCGAGGCGTACCTGGTCGGTCTGTTCGAGGACACCAATCTGTGCG
CCATTCACGCCAAGCGCGTCACCATTATGCCCAAGGACATCCAGCTGGCC
AGACGCATCCGTGGCGAGCGGGCCTAAAAGCTTTCTAGACCAT

BS16682.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
His3.3A-RD 411 CG5825-PD 1..411 17..427 2055 100 Plus
His3.3A-RC 411 CG5825-PC 1..411 17..427 2055 100 Plus
His3.3A-RA 411 CG5825-PA 1..411 17..427 2055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
His3.3A-RD 772 CG5825-RD 126..537 17..428 2060 100 Plus
His3.3A-RC 926 CG5825-RC 126..537 17..428 2060 100 Plus
His3.3A-RA 848 CG5825-RA 202..613 17..428 2060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5055259..5055541 17..299 1415 100 Plus
X 23542271 X 9154379..9154663 299..15 885 87.4 Minus
2L 23513712 2L 21420186..21420596 17..427 855 80.5 Plus
2L 23513712 2L 21425250..21425660 17..427 855 80.5 Plus
2L 23513712 2L 21430312..21430722 17..427 855 80.5 Plus
2L 23513712 2L 21435356..21435766 17..427 855 80.5 Plus
2L 23513712 2L 21440244..21440654 17..427 855 80.5 Plus
2L 23513712 2L 21454445..21454855 17..427 855 80.5 Plus
2L 23513712 2L 21484738..21485148 17..427 855 80.5 Plus
2L 23513712 2L 21489887..21490297 17..427 855 80.5 Plus
2L 23513712 2L 21494932..21495342 17..427 855 80.5 Plus
2L 23513712 2L 21499977..21500387 17..427 855 80.5 Plus
2L 23513712 2L 21505030..21505440 17..427 855 80.5 Plus
2L 23513712 2L 21510075..21510485 17..427 855 80.5 Plus
2L 23513712 2L 21515119..21515529 17..427 855 80.5 Plus
2L 23513712 2L 21520166..21520576 17..427 855 80.5 Plus
2L 23513712 2L 21525009..21525419 17..427 855 80.5 Plus
2L 23513712 2L 21529852..21530262 17..427 855 80.5 Plus
2L 23513712 2L 21534693..21535103 17..427 855 80.5 Plus
2L 23513712 2L 21541210..21541620 17..427 855 80.5 Plus
2L 23513712 2L 21459504..21459914 17..427 840 80.3 Plus
2L 23513712 2L 21464564..21464974 17..427 840 80.3 Plus
2L 23513712 2L 21469607..21470017 17..427 840 80.3 Plus
2L 23513712 2L 21474650..21475060 17..427 840 80.3 Plus
2L 23513712 2L 21479693..21480103 17..427 840 80.3 Plus
2L 23513712 2L 5055628..5055760 296..428 665 100 Plus
2L 23513712 2L 21405669..21405970 126..427 655 81.1 Plus
X 23542271 X 9154112..9154231 427..308 360 86.7 Minus
Blast to na_te.dros performed on 2014-11-28 00:59:07 has no hits.

BS16682.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:30:05 Download gff for BS16682.complete
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 1..411 17..427 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:02:10 Download gff for BS16682.complete
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..616 17..431 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:03:54 Download gff for BS16682.complete
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..610 17..425 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:30:05 Download gff for BS16682.complete
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..616 17..431 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:25 Download gff for BS16682.complete
Subject Subject Range Query Range Percent Splice Strand
His3.3A-RA 202..610 17..425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:25 Download gff for BS16682.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5055259..5055540 17..298 100 -> Plus
2L 5055631..5055757 299..425 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:03:54 Download gff for BS16682.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5055259..5055540 17..298 100 -> Plus
arm_2L 5055631..5055757 299..425 100   Plus

BS16682.pep Sequence

Translation from 16 to 426

> BS16682.pep
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*

BS16682.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
His3.3A-PD 136 CG5825-PD 1..136 1..136 676 100 Plus
His3.3A-PC 136 CG5825-PC 1..136 1..136 676 100 Plus
His3.3A-PA 136 CG5825-PA 1..136 1..136 676 100 Plus
His3.3B-PE 136 CG8989-PE 1..136 1..136 676 100 Plus
His3.3B-PB 136 CG8989-PB 1..136 1..136 676 100 Plus