Clone Sequence Records
BS16723.3prime Sequence
866 bp (739 high quality bases) assembled on 2007-05-15
> BS16723.3prime
ATGGTCTAGAAAGCTTTTATGGCTGGGAGGCCATTCGTATCCTGGCCGTG
GCCCTTGACTTTGTGTGTATCTCAGCCGTTCGCAGCGTGATGCCAAAGAT
GTCCTCGTGGTAGCGACTTTCGTCCCGCAGTGTTAGCAAAAATGTCTCAA
CTTCCGCCTCGCTTTTCTGCTCTTTGCCGGCAATGCACTTCCTGATGGTC
TGGTACACATGCTCGGCCATTGTGACATCGCCGCAGACGTAGATGTGGCC
CCGCTCCTGGACAATCAACTGGTACAACGAATCGAATTCCTGCTCAATCA
GGTCCTGCACATATGTCTTCGGAATGGCCTGCTCCCTGGACAGAGCGAGA
AAAACTCGGTCTAGGATTTGATCCTTCTGTAGCTCTGCCTTCTCCTCGGC
GTACAAATCGACATCCCGATTACGGCAGCCAAAGAAGAGCCACATCTTGG
GCAATTTGGCCGTGGGATCAAGGTCGCTTAGCACCTGGAACTCCTGCCAA
AAGGAGCGGAATGGAGCTATTCCTGTGCCAGGACCAATCAGAATAATGGG
ACGACTCCGATCGCTGGGCAAATGGAAGCCCAAGGCGCTCCTCACGAACA
TGAACAGCTCGTCGTCTGCCCGCAAGCCGGATAGATAGTTAGAGCACACG
CCATACCGCTCGTCTCCCTGGCCATCTTCACAGCGGTACTTCACGATGGC
CACCGTGAGGTGGATTTCGTCACTAACGCGGCGCGGCGACGAAGAAATGG
AATAGAAGCGAGGCTGCAGCGGCGTTAGTTGGGCAAGCAGAAGGGGAGCC
GGTGGTCGGCACGAGGGGAACTCCTCGAGAACGTCCAGCAGATGGGGCAG
CCGCCAGTGCCGCCAG
BS16723.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:16:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6713-PC | 4050 | Nos-RC | 3201..4050 | 866..17 | 4250 | 100 | Minus |
| CG6713-PE | 3735 | Nos-RE | 2886..3735 | 866..17 | 4250 | 100 | Minus |
| CG6713-PA | 4050 | Nos-RA | 3201..4050 | 866..17 | 4250 | 100 | Minus |
| CG6713-PG | 2448 | Nos-RG | 2271..2448 | 194..17 | 890 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:36:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-RK | 4000 | CG6713-RK | 2906..3755 | 866..17 | 4250 | 100 | Minus |
| Nos-RA | 4696 | CG6713-RA | 3602..4451 | 866..17 | 4250 | 100 | Minus |
| Nos-RF | 4805 | CG6713-RF | 3711..4560 | 866..17 | 4250 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10805985..10806534 | 317..866 | 2750 | 100 | Plus |
| 2L | 23513712 | 2L | 10805618..10805745 | 191..318 | 640 | 100 | Plus |
| 2L | 23513712 | 2L | 10804519..10804627 | 17..125 | 545 | 100 | Plus |
| 2L | 23513712 | 2L | 10804829..10804899 | 124..194 | 355 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:36:36 has no hits.
BS16723.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:16:04 Download gff for
BS16723.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6713-PA | 3201..4050 | 17..866 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:44:37 Download gff for
BS16723.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RF | 3711..4560 | 17..866 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:40:29 Download gff for
BS16723.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RF | 3711..4560 | 17..866 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:40:29 Download gff for
BS16723.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10804519..10804626 | 17..124 | 100 | <- | Plus |
| 2L | 10804830..10804896 | 125..191 | 100 | <- | Plus |
| 2L | 10805619..10805743 | 192..316 | 100 | <- | Plus |
| 2L | 10805985..10806534 | 317..866 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:44:37 Download gff for
BS16723.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10805619..10805743 | 192..316 | 100 | <- | Plus |
| arm_2L | 10804519..10804626 | 17..124 | 100 | <- | Plus |
| arm_2L | 10804830..10804896 | 125..191 | 100 | <- | Plus |
| arm_2L | 10805985..10806534 | 317..866 | 100 | | Plus |
BS16723.5prime Sequence
894 bp (745 high quality bases) assembled on 2007-05-15
> BS16723.5prime
GAAGTTATCAGTCGACATGTCGCAGCATTTCACATCGATATTTGAGAACC
TGCGATTCGTGACCATCAAACGTTCGACAAATGCGCAACAGCAACAGCAG
CAGCAGCAACAGCAACTGCAGCAGCAGCAGCAGCAGCTGCAGCAACAGAA
GGCACAGACACAGCAACAAAATAGCAGAAAAATCAAAACTCAAGCAACGC
CAACGTTGAATGGCAATGGGCTCTTGAGCGGCAATCCAAATGGCGGAGGC
GGTGACTCCTCGCCCAGCCATGAAGTGGACCATCCGGGTGGAGCACAAGG
AGCTCAAGCAGCAGGAGGCTTGCCATCTTCAAGTGGCACGCCATTGAGGC
ACCACAAGCGCGCCAGTATCTCCACAGCATCGCCTCCAATCCGCGAACGG
CGTGGCACCAACACCAGCATCGTGGTCGAACTGGATGGCAGTGGCAGCGG
GAGTGGGAGTGGCGGTGGTGGCGTTGGCGTTGGTCAGGGTGCGGGTTGTC
CTCCCTCGGGCAGCTGCACTGCGTCCGGAAAAAGTTCGCGGGAACTATCG
CCGTCGCCGAAAAACCAACAGCAGCCCAGAAAGATGTCACAGGATTATCG
GTCGCGTGCCGGCAGTTTTATGCACCTGGACGACGAGGGACGCAGTCTGC
TGATGCGCAAGCCGATGAGACTGAAGAACATCGAGGGCAGGCCGGAGGTC
TACGACACGCTGCACTGCAAGGGTCGCGAGATTCTTTCCTGCTCGAAGGC
CACCTGTACGAGCAGCATTATGAACATTGGCAATGCGGCGGTGGAGGCCA
GGAAATCCGATCTGATCCTCGAACACGCCAAGGACTTCCTCGAGCAGTAC
TTTACATCGATAAAGCGTACATCATCTACCGCCCACGAGACGCG
BS16723.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:10:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6713-PI | 2241 | Nos-RI | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PJ | 2271 | Nos-RJ | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PB | 2271 | Nos-RB | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PC | 4050 | Nos-RC | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PE | 3735 | Nos-RE | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PF | 2271 | Nos-RF | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PG | 2448 | Nos-RG | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PH | 2115 | Nos-RH | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PA | 4050 | Nos-RA | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG6713-PD | 642 | Nos-RD | 1..599 | 17..615 | 2995 | 100 | Plus |
| CG6713-PD | 642 | Nos-RD | 598..642 | 729..773 | 225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:13:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-RA | 4696 | CG6713-RA | 402..1279 | 17..894 | 4390 | 100 | Plus |
| Nos-RF | 4805 | CG6713-RF | 402..1279 | 17..894 | 4390 | 100 | Plus |
| Nos-RK | 4000 | CG6713-RK | 416..583 | 727..894 | 840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10831329..10831927 | 615..17 | 2995 | 100 | Minus |
| 2L | 23513712 | 2L | 10825949..10826087 | 867..729 | 695 | 100 | Minus |
| 2L | 23513712 | 2L | 10830600..10830718 | 730..612 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:13:36 has no hits.
BS16723.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:10:46 Download gff for
BS16723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6713-PJ | 1..878 | 17..894 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:28:54 Download gff for
BS16723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RF | 402..1279 | 17..894 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:39:48 Download gff for
BS16723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RF | 402..1279 | 17..894 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:39:48 Download gff for
BS16723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10825949..10826085 | 731..867 | 100 | <- | Minus |
| 2L | 10830600..10830714 | 616..730 | 100 | <- | Minus |
| 2L | 10825810..10825836 | 868..894 | 100 | <- | Minus |
| 2L | 10831329..10831927 | 17..615 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:28:54 Download gff for
BS16723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10825810..10825836 | 868..894 | 100 | <- | Minus |
| arm_2L | 10825949..10826085 | 731..867 | 100 | <- | Minus |
| arm_2L | 10830600..10830714 | 616..730 | 100 | <- | Minus |
| arm_2L | 10831329..10831927 | 17..615 | 100 | | Minus |
BS16723.complete Sequence
4082 bp assembled on 2010-05-12
GenBank Submission: KX800379
> BS16723.complete
GAAGTTATCAGTCGACATGTCGCAGCATTTCACATCGATATTTGAGAACC
TGCGATTCGTGACCATCAAACGTTCGACAAATGCGCAACAGCAACAGCAG
CAGCAGCAACAGCAACTGCAGCAGCAGCAGCAGCAGCTGCAGCAACAGAA
GGCACAGACACAGCAACAAAATAGCAGAAAAATCAAAACTCAAGCAACGC
CAACGTTGAATGGCAATGGGCTCTTGAGCGGCAATCCAAATGGCGGAGGC
GGTGACTCCTCGCCCAGCCATGAAGTGGACCATCCGGGTGGAGCACAAGG
AGCTCAAGCAGCAGGAGGCTTGCCATCTTCAAGTGGCACGCCATTGAGGC
ACCACAAGCGCGCCAGTATCTCCACAGCATCGCCTCCAATCCGCGAACGG
CGTGGCACCAACACCAGCATCGTGGTCGAACTGGATGGCAGTGGCAGCGG
GAGTGGGAGTGGCGGTGGTGGCGTTGGCGTTGGTCAGGGTGCGGGTTGTC
CTCCCTCGGGCAGCTGCACTGCGTCCGGAAAAAGTTCGCGGGAACTATCG
CCGTCGCCGAAAAACCAACAGCAGCCCAGAAAGATGTCACAGGATTATCG
GTCGCGTGCCGGCAGTTTTATGCACCTGGACGACGAGGGACGCAGTCTGC
TGATGCGCAAGCCGATGAGACTGAAGAACATCGAGGGCAGGCCGGAGGTC
TACGACACGCTGCACTGCAAGGGTCGCGAGATTCTTTCCTGCTCGAAGGC
CACCTGTACGAGCAGCATTATGAACATTGGCAATGCGGCGGTGGAGGCCA
GGAAATCCGATCTGATCCTCGAACACGCCAAGGACTTCCTCGAGCAGTAC
TTTACATCGATAAAGCGTACATCATCTACCGCCCACGAGACGCGATGGAA
ACAGGTGCGCCAGAGCATTGAGACCACTGGACATTATCAGCTAACCGAAA
CGGAACTAATTTATGGTGCCAAATTGGCCTGGCGCAATTCTTCACGTTGC
ATTGGCCGAATACAATGGTCGAAGTTGCAGGTCTTTGACTGTCGGTATGT
GACAACAACAAGTGGCATGTTTGAAGCCATTTGCAATCACATTAAATATG
CAACAAATAAGGGCAACCTGAGATCGGCCATCACGATATTTCCACAACGC
ACAGATGCCAAGCATGATTATCGCATTTGGAATAACCAATTAATATCTTA
TGCCGGCTACAAGCAGGCGGATGGGAAAATCATTGGCGATCCCATGAATG
TGGAGTTTACAGAGGTCTGCACCAAGCTGGGCTGGAAGAGCAAGGGCAGC
GAGTGGGACATACTGCCATTGGTGGTCTCGGCCAATGGTCACGATCCGGA
CTACTTTGATTACCCGCCCGAATTGATACTGGAAGTTCCGCTGACCCATC
CAAAATTCGAATGGTTCTCGGATCTGGGACTGCGATGGTACGCCCTGCCC
GCCGTATCCAGTATGCTGTTCGATGTGGGCGGCATTCAGTTTACGGCCAC
CACATTCAGTGGTTGGTACATGTCGACAGAGATTGGCAGCCGGAATTTAT
GCGACACAAATCGCCGCAATATGCTGGAGACGGTGGCGCTGAAGATGCAA
CTGGACACCCGTACGCCCACATCCTTGTGGAAGGACAAGGCTGTGGTGGA
GATGAACATTGCCGTGCTCCACTCCTACCAGAGTCGCAACGTGACCATTG
TGGATCACCACACGGCCAGCGAGAGCTTTATGAAGCATTTCGAGAACGAG
TCCAAGCTCAGGAATGGGTGTCCCGCTGATTGGATTTGGATCGTGCCGCC
GCTGTCGGGCTCCATAACGCCGGTATTCCATCAGGAGATGGCTCTGTACT
ACCTGAAGCCCTCGTTCGAGTACCAGGATCCCGCCTGGCGAACCCACGTG
TGGAAGAAGGGGCGTGGCGAGAGCAAGGGCAAGAAGCCAAGACGTAAATT
CAATTTTAAACAAATCGCTAGGGCTGTGAAATTTACATCGAAACTATTTG
GACGCGCCTTATCGAAACGCATAAAGGCAACAGTTCTATATGCCACCGAA
ACTGGCAAATCGGAGCAATATGCGAAGCAACTTTGTGAACTCCTAGGGCA
CGCATTCAATGCACAGATATATTGCATGTCCGACTACGATATATCCTCCA
TTGAGCACGAGGCATTGTTAATTGTTGTGGCCTCCACCTTTGGCAACGGT
GATCCGCCCGAAAACGGCGAGCTTTTCTCCCAGGAATTGTATGCGATGCG
TGTCCAGGAGTCTTCCGAGCATGGATTGCAGGACTCCAGCATTGGCTCGT
CAAAGTCCTTCATGAAGGCCAGCTCGCGGCAGGAGTTCATGAAGCTGCCA
CTGCAACAGGTGAAGAGAATCGACCGCTGGGACTCGCTGCGGGGCTCCAC
CTCGGACACCTTCACCGAGGAGACCTTTGGCCCCCTCTCCAATGTCCGGT
TCGCCGTTTTTGCCCTCGGCTCCTCGGCCTATCCAAATTTCTGCGCCTTC
GGTCAGTATGTGGACAACATTCTGGGCGAGCTGGGCGGCGAACGCCTGCT
GAGGGTGGCCTACGGCGACGAGATGTGCGGACAGGAGCAGTCGTTCCGGA
AGTGGGCGCCCGAGGTATTCAAGTTGGCCTGCGAGACCTTCTGCCTGGAT
CCAGAGGAGAGCCTTTCGGATGCCTCGCTAGCCCTGCAGAACGATTCGCT
GACTGTGAATACGGTGCGCCTGGTGCCGTCGGCGAATAAGGGATCCCTGG
ACAGCAGCTTATCCAAGTACCACAACAAGAAGGTGCACTGCTGCAAGGCG
AAGGCGAAGCCCCACAATTTGACCCGTTTGAGTGAGGGAGCCAAGACAAC
GATGCTGCTGGAGATCTGTGCACCTGGCTTGGAGTACGAGCCGGGTGATC
ATGTGGGCATCTTTCCGGCGAATCGAACGGAACTGGTCGACGGACTGCTA
AATCGACTGGTGGGTGTGGATAATCCCGACGAGGTGCTGCAGTTGCAATT
GCTAAAGGAAAAGCAGACATCGAATGGTATATTCAAGTGCTGGGAGCCGC
ACGACAAAATACCGCCGGATACTCTAAGGAATCTTCTGGCCCGATTCTTT
GATCTGACCACTCCGCCATCGCGACAGTTGCTCACCCTGCTGGCAGGATT
CTGTGAGGATACCGCGGACAAGGAGCGGCTGGAGTTGCTGGTCAACGATT
CGTCGGCCTACGAGGACTGGCGGCACTGGCGGCTGCCCCATCTGCTGGAC
GTTCTCGAGGAGTTCCCCTCGTGCCGACCACCGGCTCCCCTTCTGCTTGC
CCAACTAACGCCGCTGCAGCCTCGCTTCTATTCCATTTCTTCGTCGCCGC
GCCGCGTTAGTGACGAAATCCACCTCACGGTGGCCATCGTGAAGTACCGC
TGTGAAGATGGCCAGGGAGACGAGCGGTATGGCGTGTGCTCTAACTATCT
ATCCGGCTTGCGGGCAGACGACGAGCTGTTCATGTTCGTGAGGAGCGCCT
TGGGCTTCCATTTGCCCAGCGATCGGAGTCGTCCCATTATTCTGATTGGT
CCTGGCACAGGAATAGCTCCATTCCGCTCCTTTTGGCAGGAGTTCCAGGT
GCTAAGCGACCTTGATCCCACGGCCAAATTGCCCAAGATGTGGCTCTTCT
TTGGCTGCCGTAATCGGGATGTCGATTTGTACGCCGAGGAGAAGGCAGAG
CTACAGAAGGATCAAATCCTAGACCGAGTTTTTCTCGCTCTGTCCAGGGA
GCAGGCCATTCCGAAGACATATGTGCAGGACCTGATTGAGCAGGAATTCG
ATTCGTTGTACCAGTTGATTGTCCAGGAGCGGGGCCACATCTACGTCTGC
GGCGATGTCACAATGGCCGAGCATGTGTACCAGACCATCAGGAAGTGCAT
TGCCGGCAAAGAGCAGAAAAGCGAGGCGGAAGTTGAGACATTTTTGCTAA
CACTGCGGGACGAAAGTCGCTACCACGAGGACATCTTTGGCATCACGCTG
CGAACGGCTGAGATACACACAAAGTCAAGGGCCACGGCCAGGATACGAAT
GGCCTCCCAGCCATAAAAGCTTTCTAGACCAT
BS16723.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:04:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-RA | 4050 | CG6713-PA | 1..4050 | 17..4066 | 20235 | 100 | Plus |
| Nos-RK | 3297 | CG6713-PK | 1..3297 | 770..4066 | 16470 | 100 | Plus |
| Nos-RF | 2271 | CG6713-PF | 1..2205 | 17..2221 | 11025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:05:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-RA | 4696 | CG6713-RA | 402..4451 | 17..4066 | 20235 | 100 | Plus |
| Nos-RK | 4000 | CG6713-RK | 416..3755 | 727..4066 | 16685 | 100 | Plus |
| Nos-RF | 4805 | CG6713-RF | 402..2606 | 17..2221 | 11025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:04:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10805985..10807129 | 3766..2622 | 5710 | 99.9 | Minus |
| 2L | 23513712 | 2L | 10831329..10831927 | 615..17 | 2995 | 100 | Minus |
| 2L | 23513712 | 2L | 10807291..10807627 | 2623..2287 | 1685 | 100 | Minus |
| 2L | 23513712 | 2L | 10816023..10816235 | 1972..1760 | 1065 | 100 | Minus |
| 2L | 23513712 | 2L | 10816962..10817146 | 1762..1578 | 925 | 100 | Minus |
| 2L | 23513712 | 2L | 10818392..10818566 | 1579..1405 | 875 | 100 | Minus |
| 2L | 23513712 | 2L | 10825672..10825837 | 1032..867 | 830 | 100 | Minus |
| 2L | 23513712 | 2L | 10813301..10813447 | 2116..1970 | 735 | 100 | Minus |
| 2L | 23513712 | 2L | 10822966..10823111 | 1266..1121 | 730 | 100 | Minus |
| 2L | 23513712 | 2L | 10822107..10822248 | 1404..1263 | 710 | 100 | Minus |
| 2L | 23513712 | 2L | 10825949..10826087 | 867..729 | 695 | 100 | Minus |
| 2L | 23513712 | 2L | 10805618..10805745 | 3892..3765 | 640 | 100 | Minus |
| 2L | 23513712 | 2L | 10830600..10830718 | 730..612 | 595 | 100 | Minus |
| 2L | 23513712 | 2L | 10804519..10804627 | 4066..3958 | 545 | 100 | Minus |
| 2L | 23513712 | 2L | 10812464..10812570 | 2221..2115 | 535 | 100 | Minus |
| 2L | 23513712 | 2L | 10823761..10823858 | 1122..1025 | 490 | 100 | Minus |
| 2L | 23513712 | 2L | 10804829..10804899 | 3959..3889 | 355 | 100 | Minus |
| 2L | 23513712 | 2L | 10812287..10812356 | 2289..2220 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:04:58 has no hits.
BS16723.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-12 12:12:00 Download gff for
BS16723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RB | 513..2717 | 17..2221 | 100 | -> | Plus |
| Nos-RB | 2827..4669 | 2222..4064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:18 Download gff for
BS16723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RA | 402..4449 | 17..4064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:18 Download gff for
BS16723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nos-RA | 402..4449 | 17..4064 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:18 Download gff for
BS16723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10825949..10826085 | 731..867 | 100 | <- | Minus |
| 2L | 10830600..10830714 | 616..730 | 100 | <- | Minus |
| 2L | 10804521..10804626 | 3959..4064 | 100 | <- | Minus |
| 2L | 10804830..10804896 | 3892..3958 | 100 | <- | Minus |
| 2L | 10805619..10805743 | 3767..3891 | 100 | <- | Minus |
| 2L | 10805985..10807127 | 2624..3766 | 99 | <- | Minus |
| 2L | 10807291..10807624 | 2290..2623 | 100 | <- | Minus |
| 2L | 10812287..10812354 | 2222..2289 | 100 | <- | Minus |
| 2L | 10812464..10812568 | 2117..2221 | 100 | <- | Minus |
| 2L | 10813301..10813445 | 1972..2116 | 100 | <- | Minus |
| 2L | 10816024..10816233 | 1762..1971 | 100 | <- | Minus |
| 2L | 10816963..10817144 | 1580..1761 | 100 | <- | Minus |
| 2L | 10818392..10818566 | 1405..1579 | 100 | <- | Minus |
| 2L | 10822107..10822246 | 1265..1404 | 100 | <- | Minus |
| 2L | 10822968..10823109 | 1123..1264 | 100 | <- | Minus |
| 2L | 10823761..10823852 | 1031..1122 | 100 | <- | Minus |
| 2L | 10825674..10825836 | 868..1030 | 100 | <- | Minus |
| 2L | 10831329..10831927 | 17..615 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:18 Download gff for
BS16723.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10822107..10822246 | 1265..1404 | 100 | <- | Minus |
| arm_2L | 10822968..10823109 | 1123..1264 | 100 | <- | Minus |
| arm_2L | 10823761..10823852 | 1031..1122 | 100 | <- | Minus |
| arm_2L | 10825674..10825836 | 868..1030 | 100 | <- | Minus |
| arm_2L | 10825949..10826085 | 731..867 | 100 | <- | Minus |
| arm_2L | 10830600..10830714 | 616..730 | 100 | <- | Minus |
| arm_2L | 10813301..10813445 | 1972..2116 | 100 | <- | Minus |
| arm_2L | 10816024..10816233 | 1762..1971 | 100 | <- | Minus |
| arm_2L | 10816963..10817144 | 1580..1761 | 100 | <- | Minus |
| arm_2L | 10818392..10818566 | 1405..1579 | 100 | <- | Minus |
| arm_2L | 10804521..10804626 | 3959..4064 | 100 | <- | Minus |
| arm_2L | 10804830..10804896 | 3892..3958 | 100 | <- | Minus |
| arm_2L | 10805619..10805743 | 3767..3891 | 100 | <- | Minus |
| arm_2L | 10805985..10807127 | 2624..3766 | 99 | <- | Minus |
| arm_2L | 10807291..10807624 | 2290..2623 | 100 | <- | Minus |
| arm_2L | 10812287..10812354 | 2222..2289 | 100 | <- | Minus |
| arm_2L | 10812464..10812568 | 2117..2221 | 100 | <- | Minus |
| arm_2L | 10831329..10831927 | 17..615 | 100 | | Minus |
BS16723.pep Sequence
Translation from 16 to 4065
> BS16723.pep
MSQHFTSIFENLRFVTIKRSTNAQQQQQQQQQQLQQQQQQLQQQKAQTQQ
QNSRKIKTQATPTLNGNGLLSGNPNGGGGDSSPSHEVDHPGGAQGAQAAG
GLPSSSGTPLRHHKRASISTASPPIRERRGTNTSIVVELDGSGSGSGSGG
GGVGVGQGAGCPPSGSCTASGKSSRELSPSPKNQQQPRKMSQDYRSRAGS
FMHLDDEGRSLLMRKPMRLKNIEGRPEVYDTLHCKGREILSCSKATCTSS
IMNIGNAAVEARKSDLILEHAKDFLEQYFTSIKRTSSTAHETRWKQVRQS
IETTGHYQLTETELIYGAKLAWRNSSRCIGRIQWSKLQVFDCRYVTTTSG
MFEAICNHIKYATNKGNLRSAITIFPQRTDAKHDYRIWNNQLISYAGYKQ
ADGKIIGDPMNVEFTEVCTKLGWKSKGSEWDILPLVVSANGHDPDYFDYP
PELILEVPLTHPKFEWFSDLGLRWYALPAVSSMLFDVGGIQFTATTFSGW
YMSTEIGSRNLCDTNRRNMLETVALKMQLDTRTPTSLWKDKAVVEMNIAV
LHSYQSRNVTIVDHHTASESFMKHFENESKLRNGCPADWIWIVPPLSGSI
TPVFHQEMALYYLKPSFEYQDPAWRTHVWKKGRGESKGKKPRRKFNFKQI
ARAVKFTSKLFGRALSKRIKATVLYATETGKSEQYAKQLCELLGHAFNAQ
IYCMSDYDISSIEHEALLIVVASTFGNGDPPENGELFSQELYAMRVQESS
EHGLQDSSIGSSKSFMKASSRQEFMKLPLQQVKRIDRWDSLRGSTSDTFT
EETFGPLSNVRFAVFALGSSAYPNFCAFGQYVDNILGELGGERLLRVAYG
DEMCGQEQSFRKWAPEVFKLACETFCLDPEESLSDASLALQNDSLTVNTV
RLVPSANKGSLDSSLSKYHNKKVHCCKAKAKPHNLTRLSEGAKTTMLLEI
CAPGLEYEPGDHVGIFPANRTELVDGLLNRLVGVDNPDEVLQLQLLKEKQ
TSNGIFKCWEPHDKIPPDTLRNLLARFFDLTTPPSRQLLTLLAGFCEDTA
DKERLELLVNDSSAYEDWRHWRLPHLLDVLEEFPSCRPPAPLLLAQLTPL
QPRFYSISSSPRRVSDEIHLTVAIVKYRCEDGQGDERYGVCSNYLSGLRA
DDELFMFVRSALGFHLPSDRSRPIILIGPGTGIAPFRSFWQEFQVLSDLD
PTAKLPKMWLFFGCRNRDVDLYAEEKAELQKDQILDRVFLALSREQAIPK
TYVQDLIEQEFDSLYQLIVQERGHIYVCGDVTMAEHVYQTIRKCIAGKEQ
KSEAEVETFLLTLRDESRYHEDIFGITLRTAEIHTKSRATARIRMASQP*
BS16723.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:26:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nos-PA | 1349 | CG6713-PA | 1..1349 | 1..1349 | 7102 | 100 | Plus |
| Nos-PK | 1098 | CG6713-PK | 1..1098 | 252..1349 | 5798 | 100 | Plus |
| Nos-PF | 756 | CG6713-PF | 1..736 | 1..736 | 3895 | 99.9 | Plus |
| Cpr-PD | 679 | CG11567-PD | 167..678 | 807..1324 | 579 | 30.8 | Plus |
| Cpr-PC | 679 | CG11567-PC | 167..678 | 807..1324 | 579 | 30.8 | Plus |
