Clone BS16752 Report

Search the DGRC for BS16752

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:167
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG33695-RC
Protein status:BS16752.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS16752.3prime Sequence

849 bp (742 high quality bases) assembled on 2007-05-15

> BS16752.3prime
ATGGTCTAGAAAGCTTTCACCCGGCCACCTCCTCGCTGACAAAATCCAGC
TTGACCACCTCTGCGGGCAGGCACTCCTCCACGTCCACCTCGTTCTCCTG
GACATTGATGCGATTGAGGGTCATGGACACGTCTGGTCCGCACTTTAAGC
CTGCTGGCGCCCCTGCTGGCGATCCTACTGTCGCCGCTGCCGCTGGAGGA
TTGGAGGTGCTAACCACATCGTCGGCAATCACCACCGTGGGCGAGAGTAC
TGTTGGAACAGTGGACACTGCCGACACAACGGGCACCACGATCTGCGTCG
ACGAGCAGGTGGACACCATATGTGGCTGCTGCACCACTGTCGCCGTAGTC
GAAGTGGGCTGCTGGATAATGATGTTCTCCGTGATGGTGGGCGTGTTGTT
GGCCGTCGAGGCTGCAGCCTGGGCTGCCGCTAATGCCGCAGCCTTCTGCA
TCTGCTGGTACTGCTTAACAGTCACCGTCGTGCCCGTCGTAGTTGTATTA
GACTGTGGATGCAGGATGATCTGCTTTGGCTGCGCCACCAGCTGTACGTG
CTGCACGATTGGCTGTGACTTGAATACTTGAGGAGGTGGCTGCTGAAGGG
GCTGCTGCGGCTGCTGTTGTGGCAGCGTCTGGAGAACGTGTTGCACCTGC
TGGACGGGCACTTGCTTGGCGGGAATGCCGGCGTCCTCGAAGGCCTTCTT
CTTCAGCGCCTGGCGGATCTGAGAACCCGATGGCGACTCCGCATTGGGAT
GCAGCTGCATGGTTAGATCGCCCAGTCTGCTGAACGCCTGTCCGGCGGCC
GTGAATATCTCCCCCACCTTGATTGCCGAGTTCATGTCGACTGATAACT

BS16752.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG33695-PC 819 CG33695-RC 1..819 835..17 4095 100 Minus
CG33695-PD 825 CG33695-RD 23..825 819..17 4015 100 Minus
CG33695-PA 918 CG33695-RA 210..918 725..17 3545 100 Minus
CG33695-PE 918 CG33695-RE 210..918 725..17 3545 100 Minus
CG33695-PF 843 CG33695-RF 135..843 725..17 3545 100 Minus
CG33695-PA 918 CG33695-RA 1..110 835..726 550 100 Minus
CG33695-PE 918 CG33695-RE 1..110 835..726 550 100 Minus
CG33695-PF 843 CG33695-RF 1..35 760..726 175 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG33695-RC 1430 CG33695-RC 92..911 836..17 4100 100 Minus
CG33695-RD 1300 CG33695-RD 114..916 819..17 4015 100 Minus
CG33695-RE 1394 CG33695-RE 302..1010 725..17 3545 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11278754..11279463 726..17 3550 100 Minus
2L 23513712 2L 11278392..11278485 819..726 470 100 Minus
Blast to na_te.dros performed 2015-02-13 00:16:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7028 651..345 198 55.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6939 652..522 169 58.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6941 626..408 163 58.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2373 652..589 140 68.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6761..6827 652..586 137 67.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2787..2860 652..579 136 64.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2602 631..321 135 54 Minus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 92..194 689..589 132 60.2 Minus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9122..9224 689..589 132 60.2 Minus
roo 9092 roo DM_ROO 9092bp 1067..1108 631..590 129 78.6 Minus
roo 9092 roo DM_ROO 9092bp 1091..1168 652..576 126 64.1 Minus

BS16752.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:17:00 Download gff for BS16752.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33695-PC 1..819 17..835 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:54:55 Download gff for BS16752.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 88..915 11..842 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:42:18 Download gff for BS16752.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 88..915 11..842 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:42:18 Download gff for BS16752.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 11278394..11278485 726..817 100 -> Minus
2L 11278755..11279467 11..725 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:54:55 Download gff for BS16752.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11278394..11278485 726..817 100 -> Minus
arm_2L 11278755..11279467 11..725 99   Minus

BS16752.5prime Sequence

849 bp (759 high quality bases) assembled on 2007-05-15

> BS16752.5prime
GAAGTTATCAGTCGACATGAACTCGGCAATCAAGGTGGGGGAGATATTCA
CGGCCGCCGGACAGGCGTTCAGCAGACTGGGCGATCTAACCATGCAGCTG
CATCCCAATGCGGAGTCGCCATCGGGTTCTCAGATCCGCCAGGCGCTGAA
GAAGAAGGCCTTCGAGGACGCCGGCATTCCCGCCAAGCAAGTGCCCGTCC
AGCAGGTGCAACACGTTCTCCAGACGCTGCCACAACAGCAGCCGCAGCAG
CCCCTTCAGCAGCCACCTCCTCAAGTATTCAAGTCACAGCCAATCGTGCA
GCACGTACAGCTGGTGGCGCAGCCAAAGCAGATCATCCTGCATCCACAGT
CTAATACAACTACGACGGGCACGACGGTGACTGTTAAGCAGTACCAGCAG
ATGCAGAAGGCTGCGGCATTAGCGGCAGCCCAGGCTGCAGCCTCGACGGC
CAACAACACGCCCACCATCACGGAGAACATCATTATCCAGCAGCCCACTT
CGACTACGGCGACAGTGGTGCAGCAGCCACATATGGTGTCCACCTGCTCG
TCGACGCAGATCGTGGTGCCCGTTGTGTCGGCAGTGTCCACTGTTCCAAC
AGTACTCTCGCCCACGGTGGTGATTGCCGACGATGTGGTTAGCACCTCCA
ATCCTCCAGCGGCAGCGGCGACAGTAGGATCGCCAGCAGGGGCGCCAGCA
GGCTTAAAGTGCGGACCAGACGTGTCCATGACCCTCAATCGCATCAATGT
CCAGGAGAACGAGGTGGACGTGGAGGAGTGCCTGCCCGCAGAGGTGGTCA
AGCTGGATTTTGTCAGCGAGGAGGTGGCCGGGTGAAAGCTTTCTAGACC

BS16752.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG33695-PC 819 CG33695-RC 1..819 17..835 4095 100 Plus
CG33695-PD 825 CG33695-RD 23..825 33..835 4015 100 Plus
CG33695-PA 918 CG33695-RA 210..918 127..835 3545 100 Plus
CG33695-PE 918 CG33695-RE 210..918 127..835 3545 100 Plus
CG33695-PF 843 CG33695-RF 135..843 127..835 3545 100 Plus
CG33695-PA 918 CG33695-RA 1..110 17..126 550 100 Plus
CG33695-PE 918 CG33695-RE 1..110 17..126 550 100 Plus
CG33695-PF 843 CG33695-RF 1..35 92..126 175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:57:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG33695-RC 1430 CG33695-RC 92..911 16..835 4100 100 Plus
CG33695-RD 1300 CG33695-RD 114..916 33..835 4015 100 Plus
CG33695-RE 1394 CG33695-RE 302..1010 127..835 3545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11278754..11279463 126..835 3550 100 Plus
2L 23513712 2L 11278392..11278485 33..126 470 100 Plus
Blast to na_te.dros performed 2015-02-13 06:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7028 201..507 198 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6939 200..330 169 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6941 226..444 163 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2373 200..263 140 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6761..6827 200..266 137 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2787..2860 200..273 136 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2602 221..531 135 54 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9122..9224 163..263 132 60.2 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 92..194 163..263 132 60.2 Plus
roo 9092 roo DM_ROO 9092bp 1067..1108 221..262 129 78.6 Plus
roo 9092 roo DM_ROO 9092bp 1091..1168 200..276 126 64.1 Plus

BS16752.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:11:37 Download gff for BS16752.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33695-PC 1..819 17..835 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:24:54 Download gff for BS16752.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 88..915 10..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:23:45 Download gff for BS16752.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 88..915 10..841 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:23:45 Download gff for BS16752.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11278394..11278485 35..126 100 -> Plus
2L 11278755..11279467 127..841 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:24:54 Download gff for BS16752.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11278394..11278485 35..126 100 -> Plus
arm_2L 11278755..11279467 127..841 99   Plus

BS16752.complete Sequence

851 bp assembled on 2007-05-07

GenBank Submission: FJ638187

> BS16752.complete
GAAGTTATCAGTCGACATGAACTCGGCAATCAAGGTGGGGGAGATATTCA
CGGCCGCCGGACAGGCGTTCAGCAGACTGGGCGATCTAACCATGCAGCTG
CATCCCAATGCGGAGTCGCCATCGGGTTCTCAGATCCGCCAGGCGCTGAA
GAAGAAGGCCTTCGAGGACGCCGGCATTCCCGCCAAGCAAGTGCCCGTCC
AGCAGGTGCAACACGTTCTCCAGACGCTGCCACAACAGCAGCCGCAGCAG
CCCCTTCAGCAGCCACCTCCTCAAGTATTCAAGTCACAGCCAATCGTGCA
GCACGTACAGCTGGTGGCGCAGCCAAAGCAGATCATCCTGCATCCACAGT
CTAATACAACTACGACGGGCACGACGGTGACTGTTAAGCAGTACCAGCAG
ATGCAGAAGGCTGCGGCATTAGCGGCAGCCCAGGCTGCAGCCTCGACGGC
CAACAACACGCCCACCATCACGGAGAACATCATTATCCAGCAGCCCACTT
CGACTACGGCGACAGTGGTGCAGCAGCCACATATGGTGTCCACCTGCTCG
TCGACGCAGATCGTGGTGCCCGTTGTGTCGGCAGTGTCCACTGTTCCAAC
AGTACTCTCGCCCACGGTGGTGATTGCCGACGATGTGGTTAGCACCTCCA
ATCCTCCAGCGGCAGCGGCGACAGTAGGATCGCCAGCAGGGGCGCCAGCA
GGCTTAAAGTGCGGACCAGACGTGTCCATGACCCTCAATCGCATCAATGT
CCAGGAGAACGAGGTGGACGTGGAGGAGTGCCTGCCCGCAGAGGTGGTCA
AGCTGGATTTTGTCAGCGAGGAGGTGGCCGGGTGAAAGCTTTCTAGACCA
T

BS16752.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG33695-RC 819 CG33695-PC 1..819 17..835 4095 100 Plus
CG33695-RD 825 CG33695-PD 23..825 33..835 4015 100 Plus
CG33695-RE 918 CG33695-PE 210..918 127..835 3545 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:34:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG33695-RC 1430 CG33695-RC 92..911 16..835 4100 100 Plus
CG33695-RD 1300 CG33695-RD 114..916 33..835 4015 100 Plus
CG33695-RE 1394 CG33695-RE 302..1010 127..835 3545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11278754..11279463 126..835 3550 100 Plus
2L 23513712 2L 11278392..11278485 33..126 470 100 Plus
Blast to na_te.dros performed 2014-11-27 10:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7028 201..507 198 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6939 200..330 169 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6941 226..444 163 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2373 200..263 140 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6761..6827 200..266 137 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2787..2860 200..273 136 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2602 221..531 135 54 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 92..194 163..263 132 60.2 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9122..9224 163..263 132 60.2 Plus
roo 9092 roo DM_ROO 9092bp 1067..1108 221..262 129 78.6 Plus
roo 9092 roo DM_ROO 9092bp 1091..1168 200..276 126 64.1 Plus

BS16752.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:30:14 Download gff for BS16752.complete
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 1..819 17..835 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:02:21 Download gff for BS16752.complete
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 86..913 10..841 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:40:10 Download gff for BS16752.complete
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 93..910 17..834 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:30:15 Download gff for BS16752.complete
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 86..913 10..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:25:33 Download gff for BS16752.complete
Subject Subject Range Query Range Percent Splice Strand
CG33695-RC 93..910 17..834 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:25:33 Download gff for BS16752.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11278113..11278130 17..34 100 -> Plus
2L 11278394..11278485 35..126 100 -> Plus
2L 11278755..11279462 127..834 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:10 Download gff for BS16752.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11278394..11278485 35..126 100 -> Plus
arm_2L 11278113..11278130 17..34 100 -> Plus
arm_2L 11278755..11279462 127..834 100   Plus

BS16752.pep Sequence

Translation from 16 to 834

> BS16752.pep
MNSAIKVGEIFTAAGQAFSRLGDLTMQLHPNAESPSGSQIRQALKKKAFE
DAGIPAKQVPVQQVQHVLQTLPQQQPQQPLQQPPPQVFKSQPIVQHVQLV
AQPKQIILHPQSNTTTTGTTVTVKQYQQMQKAAALAAAQAAASTANNTPT
ITENIIIQQPTSTTATVVQQPHMVSTCSSTQIVVPVVSAVSTVPTVLSPT
VVIADDVVSTSNPPAAAATVGSPAGAPAGLKCGPDVSMTLNRINVQENEV
DVEECLPAEVVKLDFVSEEVAG*

BS16752.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG33695-PC 272 CG33695-PC 1..272 1..272 1357 100 Plus
CG33695-PD 274 CG33695-PD 7..274 5..272 1332 99.3 Plus
CG33695-PE 305 CG33695-PE 1..305 1..272 1313 89.2 Plus
CG33695-PF 280 CG33695-PF 1..280 26..272 1192 88.2 Plus