Clone Sequence Records
BS16775.3prime Sequence
354 bp (354 high quality bases) assembled on 2007-05-15
> BS16775.3prime
ATGGTCTAGAAAGCTTTCACAGAATAGTGCAGCAGAAAACCTCTCCTTGC
GGCTGGGCATACACACTGGCCACCGGAGCCTGGCCACCCACCACAACGGT
GGGCCGTGGCGGCGGCATCACGACCATGGGCGGTGGTGGTGGTGCTCCGA
CGATCACAGTTGGTGGCGGTGGTGCAACCACCACGGGTGGCGGAGCAAAG
CCGATGCCCACGCCTATGGGCGGCGGACGCGGTGGTCCGCCGATATTGAT
GCCGACATTCACTCGAGGTGGCGGTGGTCCGTAGGCGATTCCGGGACCCC
GTGGAGGTGGTCCTCCGTATCCGCGTCCTGGGGGTGGCATGTCGACTGAT
AACT
BS16775.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:14:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30479-PA | 324 | CG30479-RA | 1..320 | 340..21 | 1600 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:33:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30480-RB | 3460 | CG30480-RB | 3028..3361 | 350..17 | 1625 | 99.1 | Minus |
CG30479-RB | 3460 | CG30479-RB | 3028..3361 | 350..17 | 1625 | 99.1 | Minus |
CG30479-RA | 598 | CG30479-RA | 25..358 | 350..17 | 1625 | 99.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:33:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14674705..14675038 | 17..350 | 1625 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:33:55 has no hits.
BS16775.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:14:54 Download gff for
BS16775.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-PA | 1..324 | 17..340 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 11:14:58 Download gff for
BS16775.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30480-RB | 3024..3361 | 17..354 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:59:35 Download gff for
BS16775.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-RA | 21..358 | 17..354 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:59:35 Download gff for
BS16775.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14674705..14675042 | 17..354 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 11:14:58 Download gff for
BS16775.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10562210..10562547 | 17..354 | 98 | | Plus |
BS16775.5prime Sequence
354 bp (354 high quality bases) assembled on 2007-05-15
> BS16775.5prime
GAAGTTATCAGTCGACATGCCACCCCCAGGACGCGGATACGGAGGACCAC
CTCCACGGGGTCCCGGAATCGCCTACGGACCACCGCCACCTCGAGTGAAT
GTCGGCATCAATATCGGCGGACCACCGCGTCCGCCGCCCATAGGCGTGGG
CATCGGCTTTGCTCCGCCACCCGTGGTGGTTGCACCACCGCCACCAACTG
TGATCGTCGGAGCACCACCACCACCGCCCATGGTCGTGATGCCGCCGCCA
CGGCCCACCGTTGTGGTGGGTGGCCAGGCTCCGGTGGCCAGTGTGTATGC
CCAGCCGCAAGGAGAGGTTTTCTGCTGCACTATTCTCTGAAAGCTTTCTA
GACC
BS16775.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:09:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30479-PA | 324 | CG30479-RA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:32:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30480-RB | 3460 | CG30480-RB | 3028..3361 | 7..340 | 1640 | 99.4 | Plus |
CG30479-RB | 3460 | CG30479-RB | 3028..3361 | 7..340 | 1640 | 99.4 | Plus |
CG30479-RA | 598 | CG30479-RA | 25..358 | 7..340 | 1640 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:32:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14674705..14675038 | 340..7 | 1640 | 99.4 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:32:55 has no hits.
BS16775.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:10:00 Download gff for
BS16775.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-PA | 1..324 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:43:38 Download gff for
BS16775.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30480-RB | 3024..3361 | 3..340 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:40:43 Download gff for
BS16775.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-RA | 21..358 | 3..340 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:40:43 Download gff for
BS16775.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14674705..14675042 | 3..340 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:43:38 Download gff for
BS16775.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10562210..10562547 | 3..340 | 98 | | Minus |
BS16775.complete Sequence
356 bp assembled on 2007-05-07
GenBank Submission: FJ638190
> BS16775.complete
GAAGTTATCAGTCGACATGCCACCCCCAGGACGCGGATACGGAGGACCAC
CTCCACGGGGTCCCGGAATCGCCTACGGACCACCGCCACCTCGAGTGAAT
GTCGGCATCAATATCGGCGGACCACCGCGTCCGCCGCCCATAGGCGTGGG
CATCGGCTTTGCTCCGCCACCCGTGGTGGTTGCACCACCGCCACCAACTG
TGATCGTCGGAGCACCACCACCACCGCCCATGGTCGTGATGCCGCCGCCA
CGGCCCACCGTTGTGGTGGGTGGCCAGGCTCCGGTGGCCAGTGTGTATGC
CCAGCCGCAAGGAGAGGTTTTCTGCTGCACTATTCTCTGAAAGCTTTCTA
GACCAT
BS16775.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:47:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30479-RB | 324 | CG30479-PB | 1..324 | 17..340 | 1620 | 100 | Plus |
CG30479-RA | 324 | CG30479-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:47:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30480-RB | 3460 | CG30480-RB | 3028..3361 | 7..340 | 1640 | 99.4 | Plus |
CG30479-RB | 3460 | CG30479-RB | 3028..3361 | 7..340 | 1640 | 99.4 | Plus |
CG30479-RA | 598 | CG30479-RA | 25..358 | 7..340 | 1640 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:47:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14674705..14675038 | 340..7 | 1640 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:47:13 has no hits.
BS16775.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:29:52 Download gff for
BS16775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-RA | 1..324 | 17..340 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:01:55 Download gff for
BS16775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-RA | 12..349 | 3..340 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:16 Download gff for
BS16775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30480-RB | 3038..3360 | 17..339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:29:53 Download gff for
BS16775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-RA | 12..349 | 3..340 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:21 Download gff for
BS16775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30479-RA | 35..357 | 17..339 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:21 Download gff for
BS16775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14674706..14675028 | 17..339 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:16 Download gff for
BS16775.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10562211..10562533 | 17..339 | 100 | | Minus |
BS16775.pep Sequence
Translation from 16 to 339
> BS16775.pep
MPPPGRGYGGPPPRGPGIAYGPPPPRVNVGINIGGPPRPPPIGVGIGFAP
PPVVVAPPPPTVIVGAPPPPPMVVMPPPRPTVVVGGQAPVASVYAQPQGE
VFCCTIL*
BS16775.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:25:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30479-PB | 107 | CG30479-PB | 1..107 | 1..107 | 606 | 100 | Plus |
CG30479-PA | 107 | CG30479-PA | 1..107 | 1..107 | 606 | 100 | Plus |
dia-PE | 1091 | CG1768-PE | 513..594 | 1..90 | 155 | 43.2 | Plus |
dia-PB | 1091 | CG1768-PB | 513..594 | 1..90 | 155 | 43.2 | Plus |
dia-PA | 1091 | CG1768-PA | 513..594 | 1..90 | 155 | 43.2 | Plus |