Clone Sequence Records
BS16813.complete Sequence
3698 bp assembled on 2009-12-08
GenBank Submission: KX805700
> BS16813.complete
GAAGTTATCAGTCGACATGTTCCGGCCAAGTTGGTTTCCATTCGCCAGCC
TGCTGTTCCTGCTCCTTTGGAGCACCGCCTGTGGCAGGACAGCCAAGAGA
TCGGACGTCTACATAGCGGGATTCTTCCCGTACGGGGATGGCGTGGAAAA
CTCCTACACCGGTCGGGGCGTTATGCCCAGTGTAAAGCTCGCCTTGGGTC
ACGTTAATGAGCATGGAAAGATACTGGCCAACTACAGGCTGCACATGTGG
TGGAACGACACTCAGTGCAATGCTGCTGTGGGCGTAAAGTCCTTCTTCGA
TATGATGCATTCGGGTCCCAATAAAGTGATGCTCTTCGGCGCTGCGTGCA
CCCATGTGACCGATCCCATAGCCAAGGCCAGCAAGCACTGGCACCTCACC
CAGCTCAGCTACGCGGACACCCATCCCATGTTCACCAAGGATGCGTTTCC
GAATTTCTTTCGCGTGGTACCCTCGGAGAATGCCTTTAATGCGCCGCGAC
TGGCCTTGCTGAAGGAGTTCAATTGGACCAGAGTGGGCACTGTCTACCAG
AATGAGCCACGCTATTCGCTGCCCCACAATCACATGGTGGCTGACCTGGA
TGCCATGGAGGTCGAGGTGGTGGAAACGCAGAGCTTCGTCAACGATGTGG
CTGAATCATTGAAGAAACTGCGCGAGAAGGACGTGAGGATCATTCTGGGC
AACTTTAACGAGCACTTTGCACGCAAGGCATTCTGTGAGGCTTATAAATT
GGATATGTATGGCAGAGCCTATCAATGGCTGATCATGGCTACCTATTCCA
CGGATTGGTGGAATGTCACGCAGGACAGCGAGTGCAGTGTGGAGGAGATC
GCTACAGCCTTGGAAGGTGCCATTCTAGTGGATCTTTTGCCCTTGTCCAC
CAGTGGTGACATCACAGTGGCTGGCATTACTGCTGATGAGTATCTTGTGG
AGTACGACAGACTGCGAGGCACTGAATATTCCCGCTTTCATGGCTATACC
TACGATGGTATCTGGGCAGCTGCCCTGGCCATTCAGTATGTGGCCGAAAA
GCGAGAGGATCTGCTAACACATTTTGATTATCGCGTGAAGGACTGGGAGA
GTGTCTTCCTTGAGGCTCTACGTAATACATCCTTCGAGGGTGTGACGGGA
CCCGTGCGTTTCTACAACAACGAGCGCAAGGCCAACATCCTGATCAATCA
GTTTCAGCTGGGACAAATGGAAAAGATCGGGGAATACCACTCACAGAAGT
CACACTTGGATTTAAGCTTGGGAAAACCAGTCAAATGGGTGGGGAAAACT
CCTCCCAAGGATCGCACTTTGATCTACATCGAGCACAGTCAGGTCAATCC
AACCATATATATTGTATCGGCTAGTGCTTCGGTCATTGGAGTGATTATTG
CCACAGTTTTTCTGGCCTTTAACATTAAGTATCGCAATCAAAGATACATC
AAGATGTCCAGTCCCCATTTGAACAATCTGATCATTGTGGGCTGTATGAT
GACCTATTTGAGCATCATTTTCCTGGGTCTCGATACCACATTAAGTAGTG
TGGCAGCTTTTCCCTATATCTGCACAGCTCGAGCCTGGATCTTGATGGCT
GGATTCAGTCTCAGTTTTGGAGCCATGTTCTCGAAGACGTGGCGGGTGCA
TTCGATATTCACCGATCTGAAGCTCAATAAGAAGGTGATCAAGGACTATC
AATTGTTTATGGTTGTGGGCGTGCTTTTGGCCATTGATATAGCCATTATA
ACCACCTGGCAGATTGCCGATCCCTTTTACCGCGAAACTAAACAGTTGGA
ACCCTTGCATCACGAGAATATTGATGATGTCTTGGTGATCCCCGAAAACG
AGTACTGCCAGTCTGAGCACATGACCATATTCGTTAGCATTATTTATGCC
TACAAGGGACTGTTGTTGGTTTTTGGCGCCTTTTTGGCCTGGGAAACTCG
ACATGTTTCTATACCGGCTCTGAACGATTCCAAGCATATTGGTTTCTCCG
TTTATAACGTGTTCATCACTTGTCTGGCCGGAGCGGCTATATCCCTGGTG
CTATCGGATCGAAAGGATTTAGTTTTTGTCTTACTCTCGTTTTTTATCAT
TTTTTGTACGACAGCCACTTTGTGTTTGGTGTTCGTACCGAAATTGGTGG
AGCTGAAGCGGAATCCCCAGGGCGTGGTGGACAAACGCGTTAGGGCCACG
TTGAGACCCATGTCCAAAAACGGACGCCGGGATTCCTCGGTGTGCGAACT
GGAGCAACGATTGCGAGATGTAAAGAACACAAACTGCCGATTCCGAAAGG
CGCTGATGGAGAAGGAGAACGAGCTGCAGGCCTTAATCCGCAAGCTGGGA
CCCGAGGCACGCAAATGGATCGATGGGGTGACCTGCACAGGTGGCTCCAA
CGTCGGTAGCGAACTGGAGCCCATACTGAACGATGACATTGTTAGGCTCT
CAGCTCCACCGGTGCGTCGAGAGATGCCCAGCACCACAGAAGTTACCGAG
ATGACGTCCGTGGATAGTGTGACCTCGACTCATGTGGAGATGGATAACTC
CTTTGTGTCGGTGCAGTCTACAGTGATGGCGCCATCGCTTCCTCCCAAAA
AGAAAAAGCAATCGATTGTAGAGCACCACTCGCATGCCCCTGCTCCAACT
ATGATGCAGCCCATCCAGCAGCAACTGCAGCAGCACTTACAGCAACATCA
GCAGATGCAGCAGCAGCACCTGCAGCAGCAGCAACACCAGCAGATGCAAC
AGCAACAGCAGCAGCAGCAGCATCATCATCGCCATCTGGAGAAGAGAAAC
TCGGTGTCCGCTCAGACCGATGATAATATAGGCAGCATCACCAGTACGGC
GGGCAAGCGGAGCGGAGGAGACTGCTCCAGCATGCGGGAGAGGCGTCAAT
CGACCGCCTCCAGGCACTACGACAGTGGCAGCCAGACGCCCACCGCCCGG
CCAAAGTACAGCAGCTCGCACCGGAACTCCTCCACCAACATCTCCACATC
GCAATCGGAGTTGAGCAACATGTGTCCACACTCAAAGCCCAGTACTCCGG
CTGTGATTAAGACTCCCACTGCCTCCGACCATCGCCGCACCAGCATGGGC
TCCGCTCTGAAGTCCAATTTCGTGGTTTCACAGAGTGACCTCTGGGACAC
GCACACGCTGTCGCACGCCAAGCAGCGCCAGTCGCCGCGGAACTACGCCA
GTCCGCAGCGCTGTGCGGAACATCATGGCGGCCACGGGATGACCTATGAC
CCGAACACCACCTCGCCCATCCAGCGGTCCGTCTCCGAGAAGAACCGCAA
CAAACATCGGCCAAAACCGCAAAAGGGCACCGTTTGCCAGAGCGAGACGG
ACAGCGAACGGGAACGAGATCCGCCGCCCAACAGTCAGCCGTGCGTCCAG
CCGCGTAAGGTCAGCCGGAGCTCTAACATCCAGCACGCCGCCCACCACCA
CAGTTCGCCCAATGTGGCGCCCGATAAGCAGCGGAGCAGGCAGCGCGGCA
AGCAGGATAGCAGCATCTACGGCGCCAGCAGCGAGACGGAACTGCTCGAG
GGCGAGACGGCAATTTTGCCCATCTTCCGGAAACTCCTCACCGAGAAGAG
TCCCAACTATCGGGGCCGCAGTGCCGTGGGCCAGAGCTGTCCGAATATAT
CCATCAAATGCGATATCGTCGAGTACTTGTAGAAGCTTTCTAGACCAT
BS16813.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:52:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GABA-B-R2-RB | 3666 | CG6706-PB | 1..3666 | 17..3682 | 18330 | 100 | Plus |
| GABA-B-R2-RA | 3663 | CG6706-PA | 1..3663 | 17..3682 | 18250 | 99.9 | Plus |
| GABA-B-R2-RC | 3675 | CG6706-PC | 1..3675 | 17..3682 | 18095 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GABA-B-R2-RB | 3976 | CG6706-RB | 109..3780 | 11..3682 | 18345 | 100 | Plus |
| GABA-B-R2-RA | 3973 | CG6706-RA | 109..3777 | 11..3682 | 18265 | 99.9 | Plus |
| GABA-B-R2-RC | 3985 | CG6706-RC | 109..3789 | 11..3682 | 18110 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21770529..21771148 | 3682..3063 | 3100 | 100 | Minus |
| 3R | 32079331 | 3R | 21774427..21774911 | 747..263 | 2425 | 100 | Minus |
| 3R | 32079331 | 3R | 21771210..21771676 | 3062..2596 | 2335 | 100 | Minus |
| 3R | 32079331 | 3R | 21773136..21773501 | 1807..1442 | 1830 | 100 | Minus |
| 3R | 32079331 | 3R | 21771902..21772247 | 2489..2144 | 1730 | 100 | Minus |
| 3R | 32079331 | 3R | 21773560..21773856 | 1443..1147 | 1485 | 100 | Minus |
| 3R | 32079331 | 3R | 21775085..21775339 | 265..11 | 1260 | 99.6 | Minus |
| 3R | 32079331 | 3R | 21772672..21772897 | 2143..1918 | 1130 | 100 | Minus |
| 3R | 32079331 | 3R | 21773910..21774129 | 1148..929 | 1100 | 100 | Minus |
| 3R | 32079331 | 3R | 21774185..21774365 | 928..748 | 905 | 100 | Minus |
| 3R | 32079331 | 3R | 21772961..21773074 | 1920..1807 | 570 | 100 | Minus |
| 3R | 32079331 | 3R | 21771734..21771841 | 2595..2488 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:52:05 has no hits.
BS16813.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:25 Download gff for
BS16813.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RB | 120..3780 | 22..3682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:59 Download gff for
BS16813.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RB | 120..3780 | 22..3682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:25 Download gff for
BS16813.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RB | 120..3780 | 22..3682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:44 Download gff for
BS16813.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RB | 120..3780 | 22..3682 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:44 Download gff for
BS16813.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21773560..21773855 | 1148..1443 | 100 | <- | Minus |
| 3R | 21773911..21774129 | 929..1147 | 100 | <- | Minus |
| 3R | 21774185..21774365 | 748..928 | 100 | <- | Minus |
| 3R | 21770529..21771148 | 3063..3682 | 100 | <- | Minus |
| 3R | 21771210..21771676 | 2596..3062 | 100 | <- | Minus |
| 3R | 21771734..21771839 | 2490..2595 | 100 | <- | Minus |
| 3R | 21771902..21772247 | 2144..2489 | 100 | <- | Minus |
| 3R | 21772672..21772896 | 1919..2143 | 100 | <- | Minus |
| 3R | 21772963..21773073 | 1808..1918 | 100 | <- | Minus |
| 3R | 21773136..21773499 | 1444..1807 | 100 | <- | Minus |
| 3R | 21774427..21774908 | 266..747 | 100 | <- | Minus |
| 3R | 21775085..21775328 | 22..265 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:59 Download gff for
BS16813.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17599282..17599577 | 1148..1443 | 100 | <- | Minus |
| arm_3R | 17599633..17599851 | 929..1147 | 100 | <- | Minus |
| arm_3R | 17599907..17600087 | 748..928 | 100 | <- | Minus |
| arm_3R | 17600149..17600630 | 266..747 | 100 | <- | Minus |
| arm_3R | 17596251..17596870 | 3063..3682 | 100 | <- | Minus |
| arm_3R | 17596932..17597398 | 2596..3062 | 100 | <- | Minus |
| arm_3R | 17597456..17597561 | 2490..2595 | 100 | <- | Minus |
| arm_3R | 17597624..17597969 | 2144..2489 | 100 | <- | Minus |
| arm_3R | 17598394..17598618 | 1919..2143 | 100 | <- | Minus |
| arm_3R | 17598685..17598795 | 1808..1918 | 100 | <- | Minus |
| arm_3R | 17598858..17599221 | 1444..1807 | 100 | <- | Minus |
| arm_3R | 17600807..17601050 | 22..265 | 100 | | Minus |
BS16813.3prime Sequence
891 bp (889 high quality bases) assembled on 2007-05-15
> BS16813.3prime
ATGGTCTAGAAAGCTTCTACAAGTACTCGACGATATCGCATTTGATGGAT
ATATTCGGACAGCTCTGGCCCACGGCACTGCGGCCCCGATAGTTGGGACT
CTTCTCGGTGAGGAGTTTCCGGAAGATGGGCAAAATTGCCGTCTCGCCCT
CGAGCAGTTCCGTCTCGCTGCTGGCGCCGTAGATGCTGCTATCCTGCTTG
CCGCGCTGCCTGCTCCGCTGCTTATCGGGCGCCACATTGGGCGAACTGTG
GTGGTGGGCGGCGTGCTGGATGTTAGAGCTCCGGCTGACCTTACGCGGCT
GGACGCACGGCTGACTGTTGGGCGGCGGATCTCGTTCCCGTTCGCTGTCC
GTCTCGCTCTGGCAAACGGTGCCCTTTTGCGGTTTTGGCCGATGTTTGTT
GCGGTTCTTCTCGGAGACGGACCGCTGGATGGGCGAGGTGGTGTTCGGGT
CATAGGTCATCCCGTGGCCGCCATGATGTTCCGCACAGCGCTGCGGACTG
GCGTAGTTCCGCGGCGACTGGCGCTGCTTGGCGTGCGACAGCGTGTGCGT
GTCCCAGAGGTCACTCTGTGAAACCACGAAATTGGACTTCAGAGCGGAGC
CCATGCTGGTGCGGCGATGGTCGGAGGCAGTGGGAGTCTTAATCACAGCC
GGAGTACTGGGCTTTGAGTGTGGACACATGTTGCTCAACTCCGATTGCGA
TGTGGAGATGTTGGTGGAGGAGTTCCGGTGCGAGCTGCTGTACTTTGGCC
GGGCGGTGGGCGTCTGGCTGCCACTGTCGTAGTGCCTGGAGGCGGTCGAT
TGACGCCTCTCCCGCATGCTGGAGCAGTCTCCTCCGCTCCGCTTGCCCGC
CGTACTGGTGATGCTGCCTATATTATCATCGGTCTGAACGG
BS16813.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6706-PA | 3663 | GABA-B-R2-RA | 2793..3663 | 887..17 | 4355 | 100 | Minus |
| CG6706-PB | 3666 | GABA-B-R2-RB | 2796..3666 | 887..17 | 4355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GABA-B-R2-RC | 3985 | CG6706-RC | 2915..3789 | 891..17 | 4360 | 99.9 | Minus |
| GABA-B-R2-RB | 3976 | CG6706-RB | 2906..3780 | 891..17 | 4360 | 99.9 | Minus |
| GABA-B-R2-RA | 3973 | CG6706-RA | 2903..3777 | 891..17 | 4360 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21770529..21771148 | 17..636 | 3100 | 100 | Plus |
| 3R | 32079331 | 3R | 21771210..21771464 | 637..891 | 1260 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:26:42 has no hits.
BS16813.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:24:01 Download gff for
BS16813.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6706-PB | 2792..3666 | 17..891 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:00:14 Download gff for
BS16813.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RA | 2903..3779 | 13..891 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:19:44 Download gff for
BS16813.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RA | 2903..3779 | 13..891 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:19:44 Download gff for
BS16813.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21770527..21771148 | 13..636 | 99 | <- | Plus |
| 3R | 21771210..21771464 | 637..891 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:00:14 Download gff for
BS16813.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17596249..17596870 | 13..636 | 99 | <- | Plus |
| arm_3R | 17596932..17597186 | 637..891 | 99 | | Plus |
BS16813.5prime Sequence
903 bp (819 high quality bases) assembled on 2007-05-15
> BS16813.5prime
GAAGTTATCAGTCGACATGTTCCGGCCAAGTTGGTTTCCATTCGCCAGCC
TGCTGTTCCTGCTCCTTTGGAGCACCGCCTGTGGCAGGACAGCCAAGAGA
TCGGACGTCTACATAGCGGGATTCTTCCCGTACGGGGATGGCGTGGAAAA
CTCCTACACCGGTCGGGGCGTTATGCCCAGTGTAAAGCTCGCCTTGGGTC
ACGTTAATGAGCATGGAAAGATACTGGCCAACTACAGGCTGCACATGTGG
TGGAACGACACTCAGTGCAATGCTGCTGTGGGCGTAAAGTCCTTCTTCGA
TATGATGCATTCGGGTCCCAATAAAGTGATGCTCTTCGGCGCTGCGTGCA
CCCATGTGACCGATCCCATAGCCAAGGCCAGCAAGCACTGGCACCTCACC
CAGCTCAGCTACGCGGACACCCATCCCATGTTCACCAAGGATGCGTTTCC
GAATTTCTTTCGCGTGGTACCCTCGGAGAATGCCTTTAATGCGCCGCGAC
TGGCCTTGCTGAAGGAGTTCAATTGGACCAGAGTGGGCACTGTCTACCAG
AATGAGCCACGCTATTCGCTGCCCCACAATCACATGGTGGCTGACCTGGA
TGCCATGGAGGTCGAGGTGGTGGAAACGCAGAGCTTCGTCAACGATGTGG
CTGAATCATTGAAGAAACTGCGCGAGAAGGACGTGAGGATCATTCTGGGC
AACTTTAACGAGCACTTTGCACGCAAGGCATTCTGTGAGGCTTATAAATT
GGATATGTATGGCAGAGCCTATCAATGGCTGATCATGGCTACCTATTCCA
CGGATTGGTGGAATGTCACGCAGGACAGCGAGTGCAGTGTGGAGGAGATC
GCTACAGCCTTTGGAGGTGCCATTCTAGTGGATCTTTTGCCCTTGTCCAC
CAG
BS16813.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:18:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6706-PA | 3663 | GABA-B-R2-RA | 1..887 | 17..903 | 4385 | 99.7 | Plus |
| CG6706-PB | 3666 | GABA-B-R2-RB | 1..887 | 17..903 | 4385 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:46:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GABA-B-R2-RC | 3985 | CG6706-RC | 109..1001 | 11..903 | 4420 | 99.7 | Plus |
| GABA-B-R2-RB | 3976 | CG6706-RB | 109..1001 | 11..903 | 4420 | 99.7 | Plus |
| GABA-B-R2-RA | 3973 | CG6706-RA | 109..1001 | 11..903 | 4420 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:46:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21774427..21774911 | 747..263 | 2425 | 100 | Minus |
| 3R | 32079331 | 3R | 21775085..21775339 | 265..11 | 1260 | 99.6 | Minus |
| 3R | 32079331 | 3R | 21774210..21774365 | 903..748 | 750 | 98.7 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:46:35 has no hits.
BS16813.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:18:48 Download gff for
BS16813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6706-PB | 1..887 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:51:54 Download gff for
BS16813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RA | 109..1001 | 11..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:46:39 Download gff for
BS16813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GABA-B-R2-RA | 109..1001 | 11..903 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:46:39 Download gff for
BS16813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21774210..21774365 | 748..903 | 98 | <- | Minus |
| 3R | 21775085..21775339 | 11..265 | 99 | | Minus |
| 3R | 21774427..21774908 | 266..747 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:51:54 Download gff for
BS16813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17599932..17600087 | 748..903 | 98 | <- | Minus |
| arm_3R | 17600149..17600630 | 266..747 | 100 | <- | Minus |
| arm_3R | 17600807..17601061 | 11..265 | 99 | | Minus |
BS16813.pep Sequence
Translation from 16 to 3681
> BS16813.pep
MFRPSWFPFASLLFLLLWSTACGRTAKRSDVYIAGFFPYGDGVENSYTGR
GVMPSVKLALGHVNEHGKILANYRLHMWWNDTQCNAAVGVKSFFDMMHSG
PNKVMLFGAACTHVTDPIAKASKHWHLTQLSYADTHPMFTKDAFPNFFRV
VPSENAFNAPRLALLKEFNWTRVGTVYQNEPRYSLPHNHMVADLDAMEVE
VVETQSFVNDVAESLKKLREKDVRIILGNFNEHFARKAFCEAYKLDMYGR
AYQWLIMATYSTDWWNVTQDSECSVEEIATALEGAILVDLLPLSTSGDIT
VAGITADEYLVEYDRLRGTEYSRFHGYTYDGIWAAALAIQYVAEKREDLL
THFDYRVKDWESVFLEALRNTSFEGVTGPVRFYNNERKANILINQFQLGQ
MEKIGEYHSQKSHLDLSLGKPVKWVGKTPPKDRTLIYIEHSQVNPTIYIV
SASASVIGVIIATVFLAFNIKYRNQRYIKMSSPHLNNLIIVGCMMTYLSI
IFLGLDTTLSSVAAFPYICTARAWILMAGFSLSFGAMFSKTWRVHSIFTD
LKLNKKVIKDYQLFMVVGVLLAIDIAIITTWQIADPFYRETKQLEPLHHE
NIDDVLVIPENEYCQSEHMTIFVSIIYAYKGLLLVFGAFLAWETRHVSIP
ALNDSKHIGFSVYNVFITCLAGAAISLVLSDRKDLVFVLLSFFIIFCTTA
TLCLVFVPKLVELKRNPQGVVDKRVRATLRPMSKNGRRDSSVCELEQRLR
DVKNTNCRFRKALMEKENELQALIRKLGPEARKWIDGVTCTGGSNVGSEL
EPILNDDIVRLSAPPVRREMPSTTEVTEMTSVDSVTSTHVEMDNSFVSVQ
STVMAPSLPPKKKKQSIVEHHSHAPAPTMMQPIQQQLQQHLQQHQQMQQQ
HLQQQQHQQMQQQQQQQQHHHRHLEKRNSVSAQTDDNIGSITSTAGKRSG
GDCSSMRERRQSTASRHYDSGSQTPTARPKYSSSHRNSSTNISTSQSELS
NMCPHSKPSTPAVIKTPTASDHRRTSMGSALKSNFVVSQSDLWDTHTLSH
AKQRQSPRNYASPQRCAEHHGGHGMTYDPNTTSPIQRSVSEKNRNKHRPK
PQKGTVCQSETDSERERDPPPNSQPCVQPRKVSRSSNIQHAAHHHSSPNV
APDKQRSRQRGKQDSSIYGASSETELLEGETAILPIFRKLLTEKSPNYRG
RSAVGQSCPNISIKCDIVEYL*
BS16813.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:54:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GABA-B-R2-PB | 1221 | CG6706-PB | 1..1221 | 1..1221 | 6415 | 100 | Plus |
| GABA-B-R2-PA | 1220 | CG6706-PA | 1..1220 | 1..1221 | 6398 | 99.9 | Plus |
| GABA-B-R2-PC | 1224 | CG6706-PC | 1..1224 | 1..1221 | 6383 | 99.6 | Plus |
| GABA-B-R1-PC | 841 | CG15274-P1-RC | 25..814 | 23..802 | 1130 | 32.6 | Plus |
| GABA-B-R1-PB | 841 | CG15274-P1-RB | 25..814 | 23..802 | 1130 | 32.6 | Plus |
