Clone Sequence Records
BS16834.complete Sequence
2483 bp assembled on 2009-12-08
GenBank Submission: KX801908
> BS16834.complete
GAAGTTATCAGTCGACATGCTACGGCTGTGGGCCTGCCTGCTCCTCCTGG
GATCAATCCAGATCCAGGCGGTTCCATTCTACGGCGACAGCGGATACGAC
ACCGAGTTCGTGCCACTGGAGCACCAGCAGCAGCCGCAGGGACGCCAGGA
GACGGCGGCCACCGTTCCCGCTCAAACCCCCAGCGGTGTGGAGCAGAAGC
CGTTCAATGTGGACACCATCACCACGGATGTGAATTCCCCAAATCCGGCC
ATCTTCTTCCAGCAATCGTTCCCCTTCTTTGGCAATGAGTTCTTCAATTC
GTTCGGAGGCTTTGGCTTTGGAGCTGCCCAGGAGCCCTGGTGGAAGGGAC
CCAATGTGTGCACCGAAAAGGAGGAAGACGAGACTGTGGCCAGTGAAACG
GAGGCAGAAGAAACCGTGGACACCTTTGGCCAGGAACGTGATGGCGTTAC
CAACGTGGTGCGATCCCCACTCTTTGGCCAGTTCCAGTTCAGCGTTAACT
CCTGCGCCGAGAAGCCCAACAAGCACGTCTGCACCAAGATCGTGAATCAA
AATGGCAAGAAGAAAACGCTGACGCTGACCCGCCAGTGCTGCTATGGATA
TGGACGCCCCAGAAACGCTGACTTCACAACGCCCTGCGAGAAGATCGACA
TCAAGGACGTGGAGGCCACGGCCAGTGACATGGGTGCCAAGCAGTTCCTG
GAGAGTGCACGCACCGCCGGTGAGCTGGCCGATATGCTCGGAGCAGGCAG
TGGCAAGAAGGTGACCCTCTTCGTGCCCAACGACGCCGCCTTCATGGAGT
ACCGTGGTCATCATCAGCAGGAGAATAATGTGGAAGATGCCAAGGCCGAG
GCTTCCAAGCCATCCATCTACAAACTGCACGCTGTTCTCGGCGAAGTTCA
GCTGGAGGATGTGCCCAATGAGAAGCTTCTGCAGACGGAGCTGCCTGACC
AGAAGATCCGCATCAACAGCTACCAGCTGCCTGCGGCTTTGGGCCTGGAA
CCCTACCGCTTTGCCGCCAACTGTGTGCCCATCGAGAAGCACGACAAGCT
CTCGGAGCAGGCCCTTGTCCACACTCTGGGCGGAGTCCTGAAGCCGCTGA
CCAAGAACCTTATGGATATCATCAGGGAGCGTGCGGATATGTCCATTATG
CGCACCGTTCTGGAGAAGACCAACCTGAGCGCCATGCTAGAGGATGACAA
GCCAGTGACCATCTTTGTGCCCACCGATGCCGCCTTCGACAAGTTGGAAC
CTCATCTGCGTCGAGCCCTCAAGGAAGGTCGCGGTTGTGCCTCCAACATC
CTGAAGAACCATTTGCTGGACCTCACCTTCTGCTCGCTGGCCACTGTTCC
GGGTGCCAAGACGACGGCCTACAATCTACTGGGAGAACCCCTGCTCCTCA
ACCGAACCCACCGCGCTGCGAATCAGACTGGACCGACTCCCATCTACATC
AATAACTTGGCCAAAATCATTGATGCCGATATCATGGGCACCAATGGTGT
GCTGCACGTAATCGACACCATCCTGCCCACCGAATCGGCTCTGCCCATGA
CCTCGCTGATGTCGCAAAAGAACCTGACCATCTTCCAGCGATTGCTGGAG
GCCTCCGGCTACGATGATCAGTTCGACGATCTGGACAACGTGACCATCTT
TGCACCAACTGACAAGGCTCTGCAGAATACGGAATGGGCTCGCATGCTCA
AGGAACAGCCGGAGCTGCTGAATCATAACTTGGATCTGCTGGAGTTCCTT
AACTACCATGTGGTCAAGCCCATGATCAAGACCTGTGACCTGTCGGAGAA
GTCCCTGCCCACGGTTGCTGGATCTAGTGTGCGTCTGAACCTGTACTCCA
CCCATGCTCTCTTCTCGGACGTGATGAACCGGGCAACGGTAAACTGTGCC
CGTTTGGTGCACTTCGATGACGAGAGCTGCGGATCCGTTCTCCACCAGGT
GGATCGTGCCTTGGCGCCTCCCAAGAATAACATGCTTAAGCTGCTGGAGG
CTAATCCCAACTACAGCAAGTTCCTGGAGCTGGTTCGTAAGGCTAATCTT
ACACAGCTGCTGTCCAACGATTCGAGGAGTCTCACCCTGCTGGTGCCAAA
GAACGATATCTTCGAGGAGCTGAACGAGTCCGGTGAGGGTTCAAAGCCCG
CCGATCCCATGGCCTTGGTCAAAACCCATATCGTTGAGGATGTTGTCTGC
TGTGCCGGCATTATCCCAACCAACTGGCCATTTGTCCGCTCCATCGAGTC
CATCTCTGGCCAGCATCTGCGTATCACCCGCGATCGTCGTCCCAAGATCG
AGAACGCCGGCGTCACCAAGTGCGATGTGGTGGCCACCAATGGAATTCTC
CATGAGATCAACGACATCATCGTGCCACGCCCACAGCGCCAGCAACAGCA
GCGACCCCAGCTGATCCCGCCCGGAGCTGGCTATCAGCCACAGGGCGATT
TCGATGTCTTCTTCTGAAAGCTTTCTAGACCAT
BS16834.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:50:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mfas-RL | 2451 | CG3359-PL | 1..2451 | 17..2467 | 12255 | 100 | Plus |
| mfas-RD | 2451 | CG3359-PD | 1..2451 | 17..2467 | 12255 | 100 | Plus |
| mfas-RP | 2451 | CG3359-PP | 1..2451 | 17..2467 | 12255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mfas-RL | 2812 | CG3359-RL | 223..2675 | 15..2467 | 12265 | 100 | Plus |
| mfas-RD | 3091 | CG3359-RD | 502..2954 | 15..2467 | 12265 | 100 | Plus |
| mfas-RP | 2717 | CG3359-RP | 128..2580 | 15..2467 | 12265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11985549..11986231 | 1978..1296 | 3415 | 100 | Minus |
| 3R | 32079331 | 3R | 11984999..11985487 | 2467..1979 | 2445 | 100 | Minus |
| 3R | 32079331 | 3R | 11986304..11986772 | 1295..827 | 2345 | 100 | Minus |
| 3R | 32079331 | 3R | 11986835..11987120 | 826..541 | 1430 | 100 | Minus |
| 3R | 32079331 | 3R | 11987185..11987377 | 540..348 | 965 | 100 | Minus |
| 3R | 32079331 | 3R | 11988658..11988799 | 348..207 | 710 | 100 | Minus |
| 3R | 32079331 | 3R | 11989210..11989328 | 206..88 | 595 | 100 | Minus |
| 3R | 32079331 | 3R | 11992742..11992814 | 87..15 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:50:06 has no hits.
BS16834.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:59 Download gff for
BS16834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RK | 130..200 | 17..87 | 100 | -- | Plus |
| mfas-RK | 396..2774 | 88..2466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:07 Download gff for
BS16834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RP | 130..2579 | 17..2466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:21:01 Download gff for
BS16834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RK | 130..200 | 17..87 | 100 | -- | Plus |
| mfas-RK | 396..2774 | 88..2466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:54 Download gff for
BS16834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RP | 130..2579 | 17..2466 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:54 Download gff for
BS16834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11988658..11988799 | 207..348 | 100 | <- | Minus |
| 3R | 11989210..11989328 | 88..206 | 100 | <- | Minus |
| 3R | 11992742..11992812 | 17..87 | 100 | | Minus |
| 3R | 11986835..11987120 | 541..826 | 100 | <- | Minus |
| 3R | 11987185..11987376 | 349..540 | 100 | <- | Minus |
| 3R | 11985000..11985487 | 1979..2466 | 100 | <- | Minus |
| 3R | 11985549..11986231 | 1296..1978 | 100 | <- | Minus |
| 3R | 11986304..11986772 | 827..1295 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:07 Download gff for
BS16834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7814932..7815050 | 88..206 | 100 | <- | Minus |
| arm_3R | 7818464..7818534 | 17..87 | 100 | | Minus |
| arm_3R | 7812557..7812842 | 541..826 | 100 | <- | Minus |
| arm_3R | 7812907..7813098 | 349..540 | 100 | <- | Minus |
| arm_3R | 7814380..7814521 | 207..348 | 100 | <- | Minus |
| arm_3R | 7810722..7811209 | 1979..2466 | 100 | <- | Minus |
| arm_3R | 7811271..7811953 | 1296..1978 | 100 | <- | Minus |
| arm_3R | 7812026..7812494 | 827..1295 | 100 | <- | Minus |
BS16834.3prime Sequence
916 bp (811 high quality bases) assembled on 2007-05-15
> BS16834.3prime
ATGGTCTAGAAAGCTTTCAGAAGAAGACATCGAAATCGCCCTGTGGCTGA
TAGCCAGCTCCGGGCGGGATCAGCTGGGGTCGCTGCTGTTGCTGGCGCTG
TGGGCGTGGCACGATGATGTCGTTGATCTCATGGAGAATTCCATTGGTGG
CCACCACATCGCACTTGGTGACGCCGGCGTTCTCGATCTTGGGACGACGA
TCGCGGGTGATACGCAGATGCTGGCCAGAGATGGACTCGATGGAGCGGAC
AAATGGCCAGTTGGTTGGGATAATGCCGGCACAGCAGACAACATCCTCAA
CGATATGGGTTTTGACCAAGGCCATGGGATCGGCGGGCTTTGAACCCTCA
CCGGACTCGTTCAGCTCCTCGAAGATATCGTTCTTTGGCACCAGCAGGGT
GAGACTCCTCGAATCGTTGGACAGCAGCTGTGTAAGATTAGCCTTACGAA
CCAGCTCCAGGAACTTGCTGTAGTTGGGATTAGCCTCCAGCAGCTTAAGC
ATGTTATTCTTGGGAGGCGCCAAGGCACGATCCACCTGGTGGAGAACGGA
TCCGCAGCTCTCGTCATCGAAGTGCACCAAACGGGCACAGTTTACCGTTG
CCCGGTTCATCACGTCCGAGAAGAGAGCATGGGTGGAGTACAGGTTCAGA
CGCACACTAGATCCAGCAACCGTGGGCAGGGACTTCTCCGACAGGTCACA
GGTCTTGATCATGGGCTTGACCACATGGTAGTTAAGGAACTCCAGCAGAT
CCAAGTTATGATTCAGCAGCTCCGGCTGTTCCTTGAGCATGCGAGCCCAT
TCCGTATTCTGCAGAGCCTTGTCAGTTGGTGCAAAGATGGTCACGTTGTC
CAGATCGTCGAACTGATCATCGTAGCCGGAGGCCTCCAGCAATCGCTGGA
AGATGGTCAGGTTCTT
BS16834.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:27:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3359-PO | 2520 | mfas-RO | 1621..2520 | 916..17 | 4500 | 100 | Minus |
| CG3359-PL | 2451 | mfas-RL | 1552..2451 | 916..17 | 4500 | 100 | Minus |
| CG3359-PB | 2451 | mfas-RB | 1552..2451 | 916..17 | 4500 | 100 | Minus |
| CG3359-PC | 2646 | mfas-RC | 1747..2646 | 916..17 | 4500 | 100 | Minus |
| CG3359-PP | 2451 | mfas-RP | 1552..2451 | 916..17 | 4500 | 100 | Minus |
| CG3359-PD | 2451 | mfas-RD | 1552..2451 | 916..17 | 4500 | 100 | Minus |
| CG3359-PE | 2520 | mfas-RE | 1621..2520 | 916..17 | 4500 | 100 | Minus |
| CG3359-PF | 2523 | mfas-RF | 1624..2523 | 916..17 | 4500 | 100 | Minus |
| CG3359-PG | 2523 | mfas-RG | 1624..2523 | 916..17 | 4500 | 100 | Minus |
| CG3359-PH | 2448 | mfas-RH | 1549..2448 | 916..17 | 4500 | 100 | Minus |
| CG3359-PI | 2646 | mfas-RI | 1747..2646 | 916..17 | 4500 | 100 | Minus |
| CG3359-PJ | 2718 | mfas-RJ | 1819..2718 | 916..17 | 4500 | 100 | Minus |
| CG3359-PK | 2646 | mfas-RK | 1747..2646 | 916..17 | 4500 | 100 | Minus |
| CG3359-PM | 2523 | mfas-RM | 1624..2523 | 916..17 | 4500 | 100 | Minus |
| CG3359-PN | 2448 | mfas-RN | 1549..2448 | 916..17 | 4500 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:38:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mfas-RQ | 2677 | CG3359-RQ | 1641..2540 | 916..17 | 4500 | 100 | Minus |
| mfas-RL | 2812 | CG3359-RL | 1776..2675 | 916..17 | 4500 | 100 | Minus |
| mfas-RO | 2764 | CG3359-RO | 1728..2627 | 916..17 | 4500 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:38:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11984999..11985487 | 17..505 | 2445 | 100 | Plus |
| 3R | 32079331 | 3R | 11985549..11985959 | 506..916 | 2055 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:38:16 has no hits.
BS16834.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:27:32 Download gff for
BS16834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3359-PN | 1549..2448 | 17..916 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 21:48:56 Download gff for
BS16834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RO | 1728..2629 | 13..916 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:13:26 Download gff for
BS16834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RO | 1728..2629 | 13..916 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:13:26 Download gff for
BS16834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11984997..11985487 | 13..505 | 99 | <- | Plus |
| 3R | 11985549..11985959 | 506..916 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 21:48:56 Download gff for
BS16834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7810719..7811209 | 13..505 | 99 | <- | Plus |
| arm_3R | 7811271..7811681 | 506..916 | 100 | | Plus |
BS16834.5prime Sequence
819 bp (817 high quality bases) assembled on 2007-05-15
> BS16834.5prime
GAAGTTATCAGTCGACATGCTACGGCTGTGGGCCTGCCTGCTCCTCCTGG
GATCAATCCAGATCCAGGCGGTTCCATTCTACGGCGACAGCGGATACGAC
ACCGAGTTCGTGCCACTGGAGCACCAGCAGCAGCCGCAGGGACGCCAGGA
GACGGCGGCCACCGTTCCCGCTCAAACCCCCAGCGGTGTGGAGCAGAAGC
CGTTCAATGTGGACACCATCACCACGGATGTGAATTCCCCAAATCCGGCC
ATCTTCTTCCAGCAATCGTTCCCCTTCTTTGGCAATGAGTTCTTCAATTC
GTTCGGAGGCTTTGGCTTTGGAGCTGCCCAGGAGCCCTGGTGGAAGGGAC
CCAATGTGTGCACCGAAAAGGAGGAAGACGAGACTGTGGCCAGTGAAACG
GAGGCAGAAGAAACCGTGGACACCTTTGGCCAGGAACGTGATGGCGTTAC
CAACGTGGTGCGATCCCCACTCTTTGGCCAGTTCCAGTTCAGCGTTAACT
CCTGCGCCGAGAAGCCCAACAAGCACGTCTGCACCAAGATCGTGAATCAA
AATGGCAAGAAGAAAACGCTGACGCTGACCCGCCAGTGCTGCTATGGATA
TGGACGCCCCAGAAACGCTGACTTCACAACGCCCTGCGAGAAGATCGACA
TCAAGGACGTGGAGGCCACGGCCAGTGACATGGGTGCCAAGCAGTTCCTG
GAGAGTGCACGCACCGCCGGTGAGCTGGCCGATATGCTCGGAGCAGGCAG
TGGCAAGAAGGTGACCCTCTTCGTGCCCAACGACGCCGCCTTCATGGAGT
ACCGTGGTCATCATCAGCA
BS16834.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:21:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3359-PL | 2451 | mfas-RL | 1..803 | 17..819 | 4015 | 100 | Plus |
| CG3359-PB | 2451 | mfas-RB | 1..803 | 17..819 | 4015 | 100 | Plus |
| CG3359-PP | 2451 | mfas-RP | 1..803 | 17..819 | 4015 | 100 | Plus |
| CG3359-PD | 2451 | mfas-RD | 1..803 | 17..819 | 4015 | 100 | Plus |
| CG3359-PC | 2646 | mfas-RC | 267..998 | 88..819 | 3660 | 100 | Plus |
| CG3359-PI | 2646 | mfas-RI | 267..998 | 88..819 | 3660 | 100 | Plus |
| CG3359-PK | 2646 | mfas-RK | 267..998 | 88..819 | 3660 | 100 | Plus |
| CG3359-PO | 2520 | mfas-RO | 141..872 | 88..819 | 3660 | 100 | Plus |
| CG3359-PE | 2520 | mfas-RE | 141..872 | 88..819 | 3660 | 100 | Plus |
| CG3359-PF | 2523 | mfas-RF | 144..875 | 88..819 | 3660 | 100 | Plus |
| CG3359-PG | 2523 | mfas-RG | 144..875 | 88..819 | 3660 | 100 | Plus |
| CG3359-PJ | 2718 | mfas-RJ | 339..1070 | 88..819 | 3660 | 100 | Plus |
| CG3359-PM | 2523 | mfas-RM | 144..875 | 88..819 | 3660 | 100 | Plus |
| CG3359-PH | 2448 | mfas-RH | 72..800 | 91..819 | 3645 | 100 | Plus |
| CG3359-PN | 2448 | mfas-RN | 72..800 | 91..819 | 3645 | 100 | Plus |
| CG3359-PC | 2646 | mfas-RC | 1..72 | 17..88 | 360 | 100 | Plus |
| CG3359-PI | 2646 | mfas-RI | 1..72 | 17..88 | 360 | 100 | Plus |
| CG3359-PK | 2646 | mfas-RK | 1..72 | 17..88 | 360 | 100 | Plus |
| CG3359-PH | 2448 | mfas-RH | 1..72 | 17..88 | 360 | 100 | Plus |
| CG3359-PN | 2448 | mfas-RN | 1..72 | 17..88 | 360 | 100 | Plus |
| CG3359-PO | 2520 | mfas-RO | 1..71 | 17..87 | 355 | 100 | Plus |
| CG3359-PE | 2520 | mfas-RE | 1..71 | 17..87 | 355 | 100 | Plus |
| CG3359-PF | 2523 | mfas-RF | 1..71 | 17..87 | 355 | 100 | Plus |
| CG3359-PG | 2523 | mfas-RG | 1..71 | 17..87 | 355 | 100 | Plus |
| CG3359-PJ | 2718 | mfas-RJ | 1..71 | 17..87 | 355 | 100 | Plus |
| CG3359-PM | 2523 | mfas-RM | 1..71 | 17..87 | 355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:35:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mfas-RL | 2812 | CG3359-RL | 223..1027 | 15..819 | 4025 | 100 | Plus |
| mfas-RD | 3091 | CG3359-RD | 502..1306 | 15..819 | 4025 | 100 | Plus |
| mfas-RP | 2717 | CG3359-RP | 128..932 | 15..819 | 4025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:35:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11986842..11987120 | 819..541 | 1395 | 100 | Minus |
| 3R | 32079331 | 3R | 11987185..11987377 | 540..348 | 965 | 100 | Minus |
| 3R | 32079331 | 3R | 11988658..11988799 | 348..207 | 710 | 100 | Minus |
| 3R | 32079331 | 3R | 11989210..11989328 | 206..88 | 595 | 100 | Minus |
| 3R | 32079331 | 3R | 11992742..11992814 | 87..15 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:35:38 has no hits.
BS16834.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:21:48 Download gff for
BS16834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3359-PL | 1..802 | 17..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:18:37 Download gff for
BS16834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RP | 125..931 | 9..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:10:33 Download gff for
BS16834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mfas-RP | 125..931 | 9..818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:10:33 Download gff for
BS16834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11992742..11992817 | 9..87 | 94 | | Minus |
| 3R | 11989210..11989328 | 88..206 | 100 | <- | Minus |
| 3R | 11986843..11987120 | 541..818 | 100 | <- | Minus |
| 3R | 11987185..11987376 | 349..540 | 100 | <- | Minus |
| 3R | 11988658..11988799 | 207..348 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:18:37 Download gff for
BS16834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7814380..7814521 | 207..348 | 100 | <- | Minus |
| arm_3R | 7814932..7815050 | 88..206 | 100 | <- | Minus |
| arm_3R | 7818464..7818539 | 9..87 | 94 | | Minus |
| arm_3R | 7812565..7812842 | 541..818 | 100 | <- | Minus |
| arm_3R | 7812907..7813098 | 349..540 | 100 | <- | Minus |
BS16834.pep Sequence
Translation from 16 to 2466
> BS16834.pep
MLRLWACLLLLGSIQIQAVPFYGDSGYDTEFVPLEHQQQPQGRQETAATV
PAQTPSGVEQKPFNVDTITTDVNSPNPAIFFQQSFPFFGNEFFNSFGGFG
FGAAQEPWWKGPNVCTEKEEDETVASETEAEETVDTFGQERDGVTNVVRS
PLFGQFQFSVNSCAEKPNKHVCTKIVNQNGKKKTLTLTRQCCYGYGRPRN
ADFTTPCEKIDIKDVEATASDMGAKQFLESARTAGELADMLGAGSGKKVT
LFVPNDAAFMEYRGHHQQENNVEDAKAEASKPSIYKLHAVLGEVQLEDVP
NEKLLQTELPDQKIRINSYQLPAALGLEPYRFAANCVPIEKHDKLSEQAL
VHTLGGVLKPLTKNLMDIIRERADMSIMRTVLEKTNLSAMLEDDKPVTIF
VPTDAAFDKLEPHLRRALKEGRGCASNILKNHLLDLTFCSLATVPGAKTT
AYNLLGEPLLLNRTHRAANQTGPTPIYINNLAKIIDADIMGTNGVLHVID
TILPTESALPMTSLMSQKNLTIFQRLLEASGYDDQFDDLDNVTIFAPTDK
ALQNTEWARMLKEQPELLNHNLDLLEFLNYHVVKPMIKTCDLSEKSLPTV
AGSSVRLNLYSTHALFSDVMNRATVNCARLVHFDDESCGSVLHQVDRALA
PPKNNMLKLLEANPNYSKFLELVRKANLTQLLSNDSRSLTLLVPKNDIFE
ELNESGEGSKPADPMALVKTHIVEDVVCCAGIIPTNWPFVRSIESISGQH
LRITRDRRPKIENAGVTKCDVVATNGILHEINDIIVPRPQRQQQQRPQLI
PPGAGYQPQGDFDVFF*
BS16834.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mfas-PL | 816 | CG3359-PL | 1..816 | 1..816 | 4261 | 100 | Plus |
| mfas-PD | 816 | CG3359-PD | 1..816 | 1..816 | 4261 | 100 | Plus |
| mfas-PP | 816 | CG3359-PP | 1..816 | 1..816 | 4261 | 100 | Plus |
| mfas-PB | 816 | CG3359-PB | 1..816 | 1..816 | 4261 | 100 | Plus |
| mfas-PN | 815 | CG3359-PN | 1..815 | 1..816 | 4245 | 99.9 | Plus |
