Clone Sequence Records
BS16838.3prime Sequence
914 bp (826 high quality bases) assembled on 2007-05-15
> BS16838.3prime
ATGGTCTAGAAAGCTTTCAATGCCACGCGAACAGCGAATGCGAAACGAGC
AGATAGCCCGTGGTGACAATGATGCTGCCGATCATGATGGGAAATCCAAC
TTTGAAGAACTGCAGGAAGGTGAACTTGTAGCCGTGCTGCTCCGCCACGC
CGGCACAAACCACATTGGCAGAGGCTCCGATCAGAGTGCCATTGCCTCCC
AAACAGGCGCCCAAGGCCAGGGCCCAAACCAGAGGCTGTAGTGGCAGATT
CAAGGTGCTATTCTGCGCCAGTGATATGGTGATCTTGACCATCATCGTGG
TCAGCGGTATGTTGTCCACAAAAGCGGAAGCCACAGCGGAAACCCATAGA
ATGATCAAAATGGCCACCATCAGTCGCCGATCCTCGCCAACTCCCAGGAT
AATGCCCTCTGTCATGTTGCCGATCCACTCAATCAGTCCCAGTTCCGTCA
GGGCTTCCATGAGAATAAACAGAGCTGCGAAGAAGAGCAGCGTGGACCAT
TCCACGCGTGCCAGTATGGCCTCCATGTCCTCGATGTCCGCCAGAATGAT
GAGGAATATGGCACCCAGCAGAGCGGTCCATCCTAAAGACAGTCTCTGGA
GTTCGGGTACCGAGTGCAGGAAAAACAAACTGATCACAAAGACCAAGGCG
GCCGAACACTTGATCAGCAGCGGTTTGTTGCGAATGGGGTACTTTGCCTG
AAGATTGGCCAGAGTTTGTTGGTAATTGGGTGCCGGTTCTATGACCGCCG
TCATGCGTTTCTTGAGGCTTCTCTTCAAGCGATTCACCTTCTTCATCAGT
GTCTGCCGCACCAGTTCCTCATCCTTGGAATAGGCAGATAGACTGGCGGC
TGCCCGCTTCCATACGTGTATCTCGTGACGCAGTTCCTCCACCTCGGGCG
AGTCCTTGAACTGC
BS16838.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:24:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12787-PB | 2439 | hoe1-RB | 1542..2439 | 914..17 | 4465 | 99.8 | Minus |
| CG12787-PF | 2439 | hoe1-RF | 1542..2439 | 914..17 | 4465 | 99.8 | Minus |
| CG12787-PD | 2439 | hoe1-RD | 1542..2439 | 914..17 | 4465 | 99.8 | Minus |
| CG12787-PE | 2439 | hoe1-RE | 1542..2439 | 914..17 | 4465 | 99.8 | Minus |
| CG12787-PA | 2412 | hoe1-RA | 1515..2412 | 914..17 | 4465 | 99.8 | Minus |
| CG12787-PC | 2541 | hoe1-RC | 1644..2541 | 914..17 | 4465 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RJ | 3422 | CG12787-RJ | 1936..2833 | 914..17 | 4475 | 99.9 | Minus |
| hoe1-RI | 3462 | CG12787-RI | 2137..3034 | 914..17 | 4475 | 99.9 | Minus |
| hoe1-RH | 3534 | CG12787-RH | 2209..3106 | 914..17 | 4475 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4909676..4910027 | 342..693 | 1760 | 100 | Plus |
| 2L | 23513712 | 2L | 4910083..4910305 | 692..914 | 1100 | 99.6 | Plus |
| 2L | 23513712 | 2L | 4909475..4909624 | 195..344 | 750 | 100 | Plus |
| 2L | 23513712 | 2L | 4909315..4909410 | 102..197 | 480 | 100 | Plus |
| 2L | 23513712 | 2L | 4909170..4909254 | 17..101 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:25:41 has no hits.
BS16838.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:24:55 Download gff for
BS16838.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12787-PC | 1644..2541 | 17..914 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:16:30 Download gff for
BS16838.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RC | 1854..2751 | 17..914 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:43:19 Download gff for
BS16838.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RH | 2209..3106 | 17..914 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:43:19 Download gff for
BS16838.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4910083..4910305 | 692..914 | 99 | | Plus |
| 2L | 4909170..4909254 | 17..101 | 100 | <- | Plus |
| 2L | 4909315..4909408 | 102..195 | 100 | <- | Plus |
| 2L | 4909476..4909623 | 196..343 | 100 | <- | Plus |
| 2L | 4909678..4910025 | 344..691 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:16:30 Download gff for
BS16838.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4909170..4909254 | 17..101 | 100 | <- | Plus |
| arm_2L | 4909315..4909408 | 102..195 | 100 | <- | Plus |
| arm_2L | 4909476..4909623 | 196..343 | 100 | <- | Plus |
| arm_2L | 4909678..4910025 | 344..691 | 100 | <- | Plus |
| arm_2L | 4910083..4910305 | 692..914 | 99 | | Plus |
BS16838.5prime Sequence
913 bp (778 high quality bases) assembled on 2007-05-15
> BS16838.5prime
GAAGTTATCAGTCGACATGCGGGTGAAGGTGGCCAAGCGCCTGTGGTTCC
ACCGACAGGCGTCCACCAAGAGCGACCGCTTTCCACAGCCAAACGAAGTA
ACAGAAGGTGCCTTACAGGTCTGGCGGACCCTGCCGGAGCGCATTCGTCA
GGATCCCAGTCTAGCCTCCTTTCGCCAGGAGCACGAACGTCTGCATGGCG
ATGTGGACCAGCTGCACGCGGAGGAGTCGGAATTGCGTGTGCAGAATGGA
CACCACGAGGAGACGGCGCTGGCCAACCAGCCATTCACACAGATCGGGAT
CAATGTGACGAACGAGGCGGGTCAGGTGCGGGTGCTCGATGGCAGGGATC
TGGAGAATAACAACGATGATCAACACGACGAGGCCGAGCCGCATGCCAAG
AGTTTGATACGAAAGTATCTCATCTGGTTTAAGATAGCCATACTCCTGGT
GGTCTGGTGCGTCTTCACCGCCTTCCTGATGTCCAACAACGAGCATGTGG
ACCAACTGAGCCTCATTAGTGTTCCTAGGAATAGCTCACCCAGAGTATTT
CCCATTGCCACCGCCAGTCTGCAGAGGATTGGCCTGGGCCTGCGCGGACC
CTTCCGCCTGCAGGAGAACGAACTGGCCATTAACGCGAGTGTTCCACTGC
CCCTGCTCCAGGTGCAGGTGATGCGCAGCTATTTCGATGGCGAGGGCATG
GAGATCTACATCGAGAACGCCAGCCAGGTGTGGCAACTGGACGTGGTCTA
TCCCGATCTGATAGACGCCACCAGGGATACGAAGAAGCAGCGTACCTTCG
AGCTGAGTCCCACTGATCCCTTATGGTTGGCCCAGGCCAATCGCACGGAG
CTGAGCTTCGAGTTCACCAGCTCCATTGAGGGCGAATTGCCGCTCCNACT
GAATGTGGATGAG
BS16838.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:19:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12787-PB | 2439 | hoe1-RB | 1..897 | 17..913 | 4466 | 99.8 | Plus |
| CG12787-PF | 2439 | hoe1-RF | 1..897 | 17..913 | 4466 | 99.8 | Plus |
| CG12787-PD | 2439 | hoe1-RD | 1..897 | 17..913 | 4466 | 99.8 | Plus |
| CG12787-PE | 2439 | hoe1-RE | 1..897 | 17..913 | 4466 | 99.8 | Plus |
| CG12787-PA | 2412 | hoe1-RA | 50..870 | 93..913 | 4086 | 99.8 | Plus |
| CG12787-PC | 2541 | hoe1-RC | 180..999 | 94..913 | 4081 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:06:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RI | 3462 | CG12787-RI | 596..1492 | 17..913 | 4474 | 99.9 | Plus |
| hoe1-RE | 3512 | CG12787-RE | 646..1542 | 17..913 | 4474 | 99.9 | Plus |
| hoe1-RD | 3474 | CG12787-RD | 608..1504 | 17..913 | 4474 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4911006..4911513 | 913..406 | 2529 | 99.8 | Minus |
| 2L | 23513712 | 2L | 4911722..4911868 | 346..200 | 735 | 100 | Minus |
| 2L | 23513712 | 2L | 4912672..4912778 | 200..94 | 535 | 100 | Minus |
| 2L | 23513712 | 2L | 4925829..4925905 | 93..17 | 385 | 100 | Minus |
| 2L | 23513712 | 2L | 4911581..4911645 | 406..342 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:06:20 has no hits.
BS16838.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 17:19:36 Download gff for
BS16838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12787-PE | 1..897 | 17..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:32:40 Download gff for
BS16838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RD | 603..1504 | 8..913 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:04:09 Download gff for
BS16838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RD | 603..1504 | 8..913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:04:09 Download gff for
BS16838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4911723..4911867 | 201..345 | 100 | <- | Minus |
| 2L | 4912672..4912778 | 94..200 | 100 | <- | Minus |
| 2L | 4925829..4925910 | 8..93 | 95 | | Minus |
| 2L | 4911006..4911512 | 407..913 | 99 | <- | Minus |
| 2L | 4911581..4911641 | 346..406 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:32:40 Download gff for
BS16838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4912672..4912778 | 94..200 | 100 | <- | Minus |
| arm_2L | 4925829..4925910 | 8..93 | 95 | | Minus |
| arm_2L | 4911723..4911867 | 201..345 | 100 | <- | Minus |
| arm_2L | 4911006..4911512 | 407..913 | 99 | <- | Minus |
| arm_2L | 4911581..4911641 | 346..406 | 100 | <- | Minus |
BS16838.complete Sequence
2471 bp assembled on 2012-04-25
GenBank Submission: KX801309
> BS16838.complete
GAAGTTATCAGTCGACATGCGGGTGAAGGTGGCCAAGCGCCTGTGGTTCC
ACCGACAGGCGTCCACCAAGAGCGACCGCTTTCCACAGCCAAACGAAGTA
ACAGAAGGTGCCTTACAGGTCTGGCGGACCCTGCCGGAGCGCATTCGTCA
GGATCCCAGTCTAGCCTCCTTTCGCCAGGAGCACGAACGTCTGCATGGCG
ATGTGGACCAGCTGCACGCGGAGGAGTCGGAATTGCGTGTGCAGAATGGA
CACCACGAGGAGACGGCGCTGGCCAACCAGCCATTCACACAGATCGGGAT
CAATGTGACGAACGAGGCGGGTCAGGTGCGGGTGCTCGATGGCAGGGATC
TGGAGAATAACAACGATGATCAACACGACGAGGCCGAGCCGCATGCCAAG
AGTTTGATACGAAAGTATCTCATCTGGTTTAAGATAGCCATACTCCTGGT
GGTCTGGTGCGTCTTCACCGCCTTCCTGATGTCCAACAACGAGCATGTGG
ACCAACTGAGCCTCATTAGTGTTCCTAGGAATAGCTCACCCAGAGTATTT
CCCATTGCCACCGCCAGTCTGCAGAGGATTGGCCTGGGCCTGCGCGGACC
CTTCCGCCTGCAGGAGAACGAACTGGCCATTAACGCGAGTGTTCCACTGC
CCCTGCTCCAGGTGCAGGTGATGCGCAGCTATTTCGATGGCGAGGGCATG
GAGATCTACATCGAGAACGCCAGCCAGGTGTGGCAACTGGACGTGGTCTA
TCCCGATCTGATAGACGCCACCAGGGATACGAAGAAGCAGCGTACCTTCG
AGCTGAGTCCCACTGATCCCTTATGGTTGGCCCAGGCCAATCGCACGGAG
CTGAGCTTCGAGTTCACCAGCTCCATTGAGGGCGAATTGCCGCTCCAACT
GAATGTGGATGAGTCGCCCATCTATAAGCGGGATGGAGTCATCTATGCTG
CGGCTGTGCTCTGCGGCTTGTACGTGATGATCATCTGGGAGATTGTGAAT
CGAACCTTTGCTGCCATCATCGCATCCACCTTGTCGGTTGGTATACTGGC
TGCACTGAACTCCAGGCCCTCGATGGCCACCATCATGGGTTGGATTGATG
TGGAGACACTGCTGCTGCTCTTCGGCATGATGATTCTGGTGGCCATTCTC
TCCGAGACGGGAGTCTTTGACTATCTGGCTGTGTATGCCTACAAGATAAC
CAACGGACATGTTTGGCCACTCATCAATTGCCTCTGCCTGTTCACCGCTG
TCCTGTCGTCCTTCCTGGACAATGTGACCACCGTGCTGCTGATGACCCCG
GTGACGATACGACTCTGCGAGGTCATGTGCCTCAATCCGGTGCCCATACT
CATGTGCATGGTCATCTACTCGAACATTGGCGGTGCACTGACTCCAGTGG
GGGATCCGCCCAATGTCATCATAGCCTCGAATAGCTACATATCCAAAAAT
GGCGTCAATTTTGCTGTCTTCACCTTGCACATGCTGCCCGGAGTTCTGCT
GGTGATGGTGCAGACCTATATCCAGTTGCGTTTCAAGTTTCGCAACATCA
GTGATCTGCAGTTCAAGGACTCGCCGGAGGTGGAGGAACTGCGTCACGAG
ATACACGTATGGAAGCGGGCAGCCGCCAGTCTATCTGCCTATTCCAAGGA
TGAGGAACTGGTGCGGCAGACACTGATGAAGAAGGTGAATCGCTTGAAGA
GAAGCCTCAAGAAACGCATGACGGCGGTCATAGAACCGGCACCCAATTAC
CAACAAACTCTGGCCAATCTTCAGGCAAAGTACCCCATTCGCAACAAACC
GCTGCTGATCAAGTGTTCGGCCGCCTTGGTCTTTGTGATCAGTTTGTTTT
TCCTGCACTCGGTACCCGAACTCCAGAGACTGTCTTTAGGATGGACCGCT
CTGCTGGGTGCCATATTCCTCATCATTCTGGCGGACATCGAGGACATGGA
GGCCATACTGGCACGCGTGGAATGGTCCACGCTGCTCTTCTTCGCAGCTC
TGTTTATTCTCATGGAAGCCCTGACGGAACTGGGACTGATTGAGTGGATC
GGCAACATGACAGAGGGCATTATCCTGGGAGTTGGCGAGGATCGGCGACT
GATGGTGGCCATTTTGATCATTCTATGGGTTTCCGCTGTGGCTTCCGCTT
TTGTGGACAACATACCGCTGACCACGATGATGGTCAAGATCACCATATCA
CTGGCGCAGAATAGCACCTTGAATCTGCCACTACAGCCTCTGGTTTGGGC
CCTGGCCTTGGGCGCCTGTTTGGGAGGCAATGGCACTCTGATCGGAGCCT
CTGCCAATGTGGTTTGTGCCGGCGTGGCGGAGCAGCACGGCTACAAGTTC
ACCTTCCTGCAGTTCTTCAAAGTTGGATTTCCCATCATGATCGGCAGCAT
CATTGTCACCACGGGCTATCTGCTCGTTTCGCATTCGCTGTTCGCGTGGC
ATTGAAAGCTTTCTAGACCAT
BS16838.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:58:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RI | 2439 | CG12787-PI | 1..2439 | 17..2455 | 12195 | 100 | Plus |
| hoe1-RE | 2439 | CG12787-PE | 1..2439 | 17..2455 | 12195 | 100 | Plus |
| hoe1-RD | 2439 | CG12787-PD | 1..2439 | 17..2455 | 12195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RI | 3462 | CG12787-RI | 596..3034 | 17..2455 | 12195 | 100 | Plus |
| hoe1-RE | 3512 | CG12787-RE | 646..3084 | 17..2455 | 12195 | 100 | Plus |
| hoe1-RD | 3474 | CG12787-RD | 608..3046 | 17..2455 | 12195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:58:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4910468..4911513 | 1451..406 | 5230 | 100 | Minus |
| 2L | 23513712 | 2L | 4909676..4910027 | 2130..1779 | 1760 | 100 | Minus |
| 2L | 23513712 | 2L | 4910083..4910412 | 1780..1451 | 1650 | 100 | Minus |
| 2L | 23513712 | 2L | 4909475..4909624 | 2277..2128 | 750 | 100 | Minus |
| 2L | 23513712 | 2L | 4911722..4911868 | 346..200 | 735 | 100 | Minus |
| 2L | 23513712 | 2L | 4912672..4912778 | 200..94 | 535 | 100 | Minus |
| 2L | 23513712 | 2L | 4909315..4909410 | 2370..2275 | 480 | 100 | Minus |
| 2L | 23513712 | 2L | 4909170..4909254 | 2455..2371 | 425 | 100 | Minus |
| 2L | 23513712 | 2L | 4925829..4925905 | 93..17 | 385 | 100 | Minus |
| 2L | 23513712 | 2L | 4911581..4911645 | 406..342 | 325 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 11:58:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 3106..3166 | 1454..1394 | 125 | 67.2 | Minus |
BS16838.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:49:09 Download gff for
BS16838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RD | 622..3065 | 8..2455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:16:59 Download gff for
BS16838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RD | 627..3064 | 17..2454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:25 Download gff for
BS16838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RD | 608..3045 | 17..2454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:12:45 Download gff for
BS16838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RD | 627..3064 | 17..2454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:54:49 Download gff for
BS16838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RD | 608..3045 | 17..2454 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:54:49 Download gff for
BS16838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4925829..4925905 | 17..93 | 100 | | Minus |
| 2L | 4909171..4909254 | 2371..2454 | 100 | <- | Minus |
| 2L | 4909315..4909408 | 2277..2370 | 100 | <- | Minus |
| 2L | 4909476..4909623 | 2129..2276 | 100 | <- | Minus |
| 2L | 4909678..4910025 | 1781..2128 | 100 | <- | Minus |
| 2L | 4910083..4910412 | 1451..1780 | 100 | <- | Minus |
| 2L | 4910469..4911512 | 407..1450 | 100 | <- | Minus |
| 2L | 4911581..4911641 | 346..406 | 100 | <- | Minus |
| 2L | 4911723..4911867 | 201..345 | 100 | <- | Minus |
| 2L | 4912672..4912778 | 94..200 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:25 Download gff for
BS16838.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4909171..4909254 | 2371..2454 | 100 | <- | Minus |
| arm_2L | 4909315..4909408 | 2277..2370 | 100 | <- | Minus |
| arm_2L | 4909476..4909623 | 2129..2276 | 100 | <- | Minus |
| arm_2L | 4925829..4925905 | 17..93 | 100 | | Minus |
| arm_2L | 4909678..4910025 | 1781..2128 | 100 | <- | Minus |
| arm_2L | 4910083..4910412 | 1451..1780 | 100 | <- | Minus |
| arm_2L | 4910469..4911512 | 407..1450 | 100 | <- | Minus |
| arm_2L | 4911581..4911641 | 346..406 | 100 | <- | Minus |
| arm_2L | 4911723..4911867 | 201..345 | 100 | <- | Minus |
| arm_2L | 4912672..4912778 | 94..200 | 100 | <- | Minus |
BS16838.pep Sequence
Translation from 16 to 2454
> BS16838.pep
MRVKVAKRLWFHRQASTKSDRFPQPNEVTEGALQVWRTLPERIRQDPSLA
SFRQEHERLHGDVDQLHAEESELRVQNGHHEETALANQPFTQIGINVTNE
AGQVRVLDGRDLENNNDDQHDEAEPHAKSLIRKYLIWFKIAILLVVWCVF
TAFLMSNNEHVDQLSLISVPRNSSPRVFPIATASLQRIGLGLRGPFRLQE
NELAINASVPLPLLQVQVMRSYFDGEGMEIYIENASQVWQLDVVYPDLID
ATRDTKKQRTFELSPTDPLWLAQANRTELSFEFTSSIEGELPLQLNVDES
PIYKRDGVIYAAAVLCGLYVMIIWEIVNRTFAAIIASTLSVGILAALNSR
PSMATIMGWIDVETLLLLFGMMILVAILSETGVFDYLAVYAYKITNGHVW
PLINCLCLFTAVLSSFLDNVTTVLLMTPVTIRLCEVMCLNPVPILMCMVI
YSNIGGALTPVGDPPNVIIASNSYISKNGVNFAVFTLHMLPGVLLVMVQT
YIQLRFKFRNISDLQFKDSPEVEELRHEIHVWKRAAASLSAYSKDEELVR
QTLMKKVNRLKRSLKKRMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKC
SAALVFVISLFFLHSVPELQRLSLGWTALLGAIFLIILADIEDMEAILAR
VEWSTLLFFAALFILMEALTELGLIEWIGNMTEGIILGVGEDRRLMVAIL
IILWVSAVASAFVDNIPLTTMMVKITISLAQNSTLNLPLQPLVWALALGA
CLGGNGTLIGASANVVCAGVAEQHGYKFTFLQFFKVGFPIMIGSIIVTTG
YLLVSHSLFAWH*
BS16838.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:21:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-PI | 812 | CG12787-PI | 1..812 | 1..812 | 4142 | 100 | Plus |
| hoe1-PE | 812 | CG12787-PE | 1..812 | 1..812 | 4142 | 100 | Plus |
| hoe1-PD | 812 | CG12787-PD | 1..812 | 1..812 | 4142 | 100 | Plus |
| hoe1-PF | 812 | CG12787-PF | 1..812 | 1..812 | 4142 | 100 | Plus |
| hoe1-PB | 812 | CG12787-PB | 1..812 | 1..812 | 4142 | 100 | Plus |
